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LOCUS XM_013250085 5131 bp mRNA linear INV 02-SEP-2023 tousled-like 1 (LOC106085715), transcript variant X2, mRNA. ACCESSION XM_013250085 VERSION XM_013250085.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250085.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5131 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5131 /gene="LOC106085715" /note="serine/threonine-protein kinase tousled-like 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085715" CDS 773..5002 /gene="LOC106085715" /codon_start=1 /product="serine/threonine-protein kinase tousled-like 1 isoform X1" /protein_id="XP_013105539.1" /db_xref="GeneID:106085715" /translation="MSLTLPMSLIETSTLTESSAHRNFTKYQTTNPMVVIQATTTTSS TTAAAVTAASHKNNSLIPQTTSRTTTTTTKRTRKRSTTDFSTSTTTTAAAAAAALLTN VNYINPTIAATATTKRNRKQLQQQQQQQQQQTLYVQQRMSAGAQLQMAPQTSTSISHH TTPQQQQQHFVHNPQQQPQQQAQPQQQQAILSQVQQPQPQIIQQQTHQQQQQQQQLQL QQQHITHYTQQPPTLATAHHTTHLQPHPQQQPQHHHLQGQTPQQGSQLPQQQQHTQHL LLHQQQQHSGGGHSSNPDSNMSTGSSHSEKDVVNPDMLSTQQQSSGIVQQIGILQQQQ TTVNVSPAGNGMMNTSGMGISADPNAMQTTNHHLPHQLTHQQQTVGGGAAGGVVGTTT TGRMEKLSRTPTERKRKRKIAALHADDSGGAGGGGGGGGPGSGNGGNNNSSNASKSAK HNNSSSSSGTQLLKPNLSLNLGAQQDRLQMPGSGVGGGGKTPRLLPPGSGGSVGDNKK INDYFNAKHSVQSAANSPMRHTAGGGSKSPSSAGPQQQSQQPGPQAQQVPTSVGGNST YPMYPPSPQQPQMPAPGIPPTPTSQPPPPDFHYSSVVAANSVTGKQQRQQQTSNAMVP PQSPLVGVGNVGLMSSSHMVHNQSAAGAAALLGGQATTGAGGGGNGPPPPPLPQQQQQ PTLQLPASSVVATTVQQTLTTSQQQQLAAAAAAQLNSLQHAGMLTNPGGGVPQNAGAP QQQPSTAMVTKATQTDLSQHEMQERESESETSKSKLDEMTRLSDEQKCQIIAHQKLID QHKSHIAKCIDVVKKLLKEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQENWTDG YAFQELSRRQEEISAEREEIDRQKKQLMKKRPAESGRKRNNNSQQNSNSNDSSNLNAG CDRLSGNDSGIGSVTSGSGGGGSGRGLTRSNSTQAQSQLLHNGGGSGTSGTGIGSDRL SDRGGGGSGRGDNSGSGSDSATFLKPDPVSGVYTAQEYYEYDEILKLRQNALKKEDAD LQLEMEKLERERNLHIRELKRILNEDQSRFNNHPVLNDRYLLLMLLGKGGFSEVHKAF DLKEQRYVACKVHQLNKDWKEDKKANYIKHALREYNIHKALDHPRVVKLYDVFEIDAN SFCTVLEYCDGHDLDFYLKQHKTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLKPG NILLTEGNVCGEIKITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKN PPKISSKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPTVSN EAKSFIRGCLAYRKEDRMDVFSLARHEYIQPPIPKHGRGQSLTQQQQQQQQQQQQQQQ QQQSSGNQANSAGQTSFSAGMFGNLNQSSSS" misc_feature <2993..>3433 /gene="LOC106085715" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 4013..4816 /gene="LOC106085715" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(4022..4024,4061..4063,4067..4069,4175..4177, 4226..4237,4247..4249,4253..4255,4370..4372,4376..4378, 4382..4387,4391..4393,4433..4435,4442..4444,4511..4522) /gene="LOC106085715" /note="active site" /db_xref="CDD:270892" misc_feature order(4247..4249,4253..4255,4370..4372,4376..4378, 4382..4384,4442..4444,4511..4522) /gene="LOC106085715" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(4430..4468,4481..4522) /gene="LOC106085715" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" ORIGIN 1 atgagaccgt gtggttttgt gtggatttgt ttttctgtgt gtttttaaac aatttttgcg 61 tcattactac aactaaataa aatattttta ttcaaactta taagcaagtt cgacatacaa 121 acaaacatac ataaatatgt atgcataagt acatattcat ctccatcgcg tcgtcggtat 181 ttcggtgctg gtgtacatag acgaagaaaa aaaaaataaa caacacaaat taacatagtg 241 aacaacgtcc aacgtcaaaa gaaatatata tatgtaaatc caaatatata cagatggaca 301 tacacaccta cattcagatg tctgtatgta tacaaaaaca acaacgaaaa caagacaaca 361 tagcagcagt ggtgactgcc agcagcagag cattattagc agctgtcaat aaagccggtc 421 ggaaaacagc tgtttaatct tatgtatgta tatgttgttc gccgttgaag cacacaccac 481 tctcaattgt tctcgaaacg agagcgagag caacgaaagc actcgttaaa ttctcatgtg 541 tagaggagcc atctagccaa aaccatactc aagaaaatgg atttctaaac aaaaggaaaa 601 aaaaaacaaa ataaccgaaa aactctgtgc tctcatcaga gtaaagtgaa tataaaaacg 661 agagacttac aacgcagagt aaattgttgg agagttttga ctccggtcaa cgtaaaactc 721 cccaatcaca catatttact ccccaacaaa ggctactttt caaactcacc caatgtctct 781 cactttgcca atgtcgctaa tagagacttc aacactaacc gaaagttcag cacatagaaa 841 ttttaccaaa tatcagacga caaatcccat ggttgttata caagcaacaa caacaacatc 901 atccacaaca gcagcagcag tgacagcagc atcccacaaa aacaacagct taattccgca 961 aacaacatct agaacaacaa cgacaacaac aaaacgtaca cgcaaaagat caacaacaga 1021 tttctcaacg tcaaccacca caacggcggc agctgctgct gctgcacttc taacaaatgt 1081 aaattacatc aatcccacaa tagcagcaac agcaacaaca aaacggaata gaaaacaact 1141 gcagcagcag cagcaacaac agcaacagca aactttatat gtgcaacaga gaatgtccgc 1201 cggcgctcaa ttgcagatgg ccccacagac atcgacgtca ataagccatc atacaacgcc 1261 acagcaacag caacaacatt ttgttcataa tcctcaacag cagccgcaac aacaggcgca 1321 accacagcag cagcaagcta tattgtcaca agtccagcag ccgcagcctc aaataataca 1381 acagcaaaca catcaacaac agcagcagca acaacaattg cagttgcaac agcagcatat 1441 aacacattat acacaacagc ctccgacgct tgccacagca caccatacaa cacatcttca 1501 accgcaccca cagcaacaac cacagcatca ccatcttcaa gggcaaacgc cgcaacaagg 1561 aagccagctt ccacagcaac agcaacatac gcaacatttg ctgttgcatc agcagcagca 1621 acatagcggc ggtggtcaca gcagtaatcc tgactcgaat atgagcactg gctcttcgca 1681 cagcgaaaaa gatgttgtta atccagatat gttaagcaca cagcaacaat ccagcggtat 1741 tgtccaacaa attggtattt tacaacaaca gcaaacaact gtcaacgttt cgccagctgg 1801 caacggtatg atgaacacca gcggtatggg tatatcagct gatcctaatg ccatgcaaac 1861 cacaaaccac caccttccac accaactgac acatcagcaa cagaccgtgg gcggtggcgc 1921 tgctggtggg gttgttggaa caacgaccac aggtcgcatg gaaaaactat cacgaacacc 1981 aactgaacgt aaacgaaaaa gaaagatagc cgcattgcat gcggatgata gtggtggtgc 2041 cggtggtgga ggtggaggcg gcggtcctgg cagtggcaat ggaggtaata ataattcaag 2101 caacgctagt aaatcagcta aacacaacaa ttcctcctcc tcctcaggca cacagttatt 2161 aaaaccaaat ttatctctaa atttaggtgc tcaacaggat cgtctccaaa tgcccggttc 2221 aggtgtagga gggggcggca agacgccgcg actattgccg cccggtagcg gtggttcagt 2281 tggcgataat aaaaaaatta acgactattt taatgcgaaa cacagtgtac agtcagcggc 2341 caatagtcct atgaggcata cagctggggg tggctcgaag agcccctcat cggctggccc 2401 gcagcagcag tcgcagcagc cggggccaca ggcccaacaa gtgccaacat ccgtaggcgg 2461 taacagcacg tatcccatgt atccacctag tccacaacaa ccacaaatgc cagcacctgg 2521 cataccgccc acacccacgt cacaaccccc gcctccagat ttccattaca gtagtgtagt 2581 ggccgccaac tcggtaacgg gcaagcagca aaggcaacag caaacttcca atgcaatggt 2641 tcctccgcaa tcaccactcg ttggtgtcgg taatgttggt ctaatgtcat cctcccacat 2701 ggtacacaac caatcagcag ctggggcggc agccctattg ggtggccaag caacaacagg 2761 tgcgggcggc ggaggcaatg gcccaccacc ccctcctctg ccacaacagc agcaacagcc 2821 aactcttcaa cttcccgcct cttccgtcgt tgctaccacc gtgcaacaaa cactgacgac 2881 ctcgcagcaa cagcaactgg ctgctgcagc ggccgcccaa ctgaattcac tgcaacatgc 2941 cggcatgctg acaaacccag gcggcggtgt accacagaac gccggtgcgc cccagcagca 3001 accctcgaca gcgatggtta ccaaagcaac acaaaccgac ctctcacaac acgaaatgca 3061 agagcgtgaa tcggaaagtg aaacaagtaa atcaaaattg gatgagatga caagactgtc 3121 tgatgaacaa aaatgtcaaa ttattgctca tcaaaaacta atcgatcaac ataaatccca 3181 catagccaag tgtattgatg tggtcaagaa gctactgaag gagaagtcca gcattgagaa 3241 aaaggaggct cgccagaaat gtatgcagaa tcgcctgcgg ctgggccaat tcgttacaca 3301 gcgtgtaggt gctacattcc aggagaactg gactgatggt tatgccttcc aggagttgag 3361 ccgacgacag gaggaaatct ccgctgagcg cgaagaaatc gatcgtcaaa agaagcaact 3421 aatgaagaaa cggcctgccg aatctggtcg aaagcgtaac aacaatagcc agcagaattc 3481 caattccaat gattcctcca acctgaatgc cggttgtgat cgcctatcgg gcaatgacag 3541 cggcattggt agtgtaactt cagggtccgg cggtggtgga agtggtcgtg gcctgacgcg 3601 atcaaattca acgcaagctc aaagtcaact gctacacaat ggcggtggca gtggcaccag 3661 tggcactggc ataggtagtg atcgcctatc ggatcgcgga ggtggcggtt cgggacgcgg 3721 cgataattct ggcagtggtt ccgattcagc aacgttcctt aaacccgatc ctgtatcggg 3781 tgtctatacc gctcaagaat attacgaata tgatgagatt cttaaactac gtcaaaatgc 3841 tctcaaaaaa gaagatgccg atcttcagtt ggaaatggag aagttagaac gtgaacgcaa 3901 tttgcatata cgtgaattga aacgcatttt aaatgaagat cagtcccgct ttaataatca 3961 tccagtattg aatgatcgtt acctattgct gatgctattg ggtaaaggtg gtttctctga 4021 agtccataaa gcattcgatt taaaggaaca acgttatgtt gcatgtaaag ttcatcaatt 4081 gaataaggat tggaaagaag ataaaaaggc caactatatc aaacatgctt taagagaata 4141 taatattcat aaggcactcg atcatcctag agtggtgaaa ttatacgatg tctttgaaat 4201 tgatgccaat tcattttgta cggttttgga atattgtgat ggtcatgatt tagattttta 4261 tctaaaacaa cataagacga taccagaacg tgaagcacgt tcaataatca tgcaggttgt 4321 ttctgcttta aaatatttga atgagattaa accaccagtc atacattacg atttgaaacc 4381 tggtaatatt ttattaaccg agggcaatgt atgtggcgag atcaaaataa ccgattttgg 4441 tttgtccaaa gtaatggacg atgaaaatta taatccagat catggcatgg acctaacctc 4501 ccaaggagca ggaacatatt ggtatttacc acctgaatgc tttgttgtgg gtaaaaatcc 4561 tccaaaaatc tcttcaaaag tcgatgtatg gagtgtgggt gttattttct atcagtgtct 4621 gtatggcaag aaaccgtttg gccataatca atcacaagct actatcttag aggagaatac 4681 gattttaaaa gcaactgaag tacaattctc caacaagccc acagtgtcta atgaagctaa 4741 gagttttatt agaggctgtc tggcttatcg caaagaagat cgcatggatg tattttcgct 4801 ggcgcggcat gaatacatac aaccccccat tccgaagcat ggccgtggtc aatcgcttac 4861 ccaacaacag cagcaacaac aacagcagca acaacagcag cagcaacagc agcaatcatc 4921 aggtaatcaa gccaactctg ccggacagac atcattctca gcgggcatgt ttggcaattt 4981 gaatcaatcg agttcgtcct agctgcacac taaacgtaat tccaattcat aattgttaaa 5041 gttaatacaa agtaatagta gcaacatcaa tcataatcaa cacaacaaca acaacaacaa 5101 taataacacc aacaatcatc atccacaaca g