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LOCUS XM_013250077 3534 bp mRNA linear INV 02-SEP-2023 (LOC106085709), transcript variant X11, mRNA. ACCESSION XM_013250077 VERSION XM_013250077.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250077.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3534 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3534 /gene="LOC106085709" /note="amyloid-beta-like protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106085709" CDS 913..3342 /gene="LOC106085709" /codon_start=1 /product="amyloid-beta-like protein isoform X11" /protein_id="XP_013105531.1" /db_xref="GeneID:106085709" /translation="MSRILAWGLMALVAITATSQVQAASPRWEPQIAVLCEAGQIYQP QYLSEEGRWVTDLNKKSTGATCLRDKLDLLDYCKKAYPNRDITNIVESSHYQKIGGWC RQGALNANKCKGAHRWIKPFRCLGPFQSDALLVPEGCLFDHIHNASRCWPFVRWNQTG AAACQERGMQMRSFAMLLPCGISLFSGVEFVCCPKHFKTDEIRVKKTDLPVMPPVEMA NPISDDLDDISSDDNDSNYSKDTADDVEDEDDEDDLLADDEEDEMAADEATATGDDVN AEYDSGEDNYEEDAVDSYDQQGSSSGAKPSNKPNAKDEKSGGSLDGAAGKSNNGDLPM PPTTGQPTPDPYFTHFDPHYEHQSYKRLEESHREKVTRVMKDWSDLEEKYQDMRLADP KAAQSFKQRMTARFQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTCYTQA LTEQPPNAHHVEKCLQKLLRALHKDRAHALAHYRHLLNSGGAGGLEAAASERPRTLER LIDIDRAVNQSMTMLKRYPELSNKISQLMNDYILALRSKDDIPGSSLGMSEEAEAAIL DKYRIEIERKVAEKERLRLAEKQRKEQRAAEREKLREEKLRLEAKKVDDMVKAEQDSQ AFTSEESKTSKDESMVDPTKMAHSDKDSAAEEYVEATLSTKTQTILPTVDDEAVQRAV EDVAAAVAHQEAEPAVQHFMSHDLGHRESSFSLRREFSHSSSAHANKEGRNVYFTLSF AGIALMAAIFVGIAVAKWRTARSPHAQGFIEVDQNAAAHHPVVPEEKIVPSMQINGYE NPTYKYFEVKE" misc_feature 976..1494 /gene="LOC106085709" /note="amyloid A4; Region: A4_EXTRA; smart00006" /db_xref="CDD:128326" misc_feature 1915..2481 /gene="LOC106085709" /note="E2 domain of amyloid precursor protein; Region: APP_E2; pfam12925" /db_xref="CDD:463752" misc_feature 2635..>2823 /gene="LOC106085709" /note="DDRGK domain; Region: DDRGK; pfam09756" /db_xref="CDD:370664" misc_feature 3157..3330 /gene="LOC106085709" /note="Beta-amyloid precursor protein C-terminus; Region: APP_amyloid; pfam10515" /db_xref="CDD:463129" ORIGIN 1 cggattttgt agacgcatct aggcgcatac acatcgagag agtttgctga attgtaaaat 61 tgaacccaaa aagccaacaa aagaagaaaa taaattggaa aaaaagaaaa tccaaattga 121 aaattgtgtg tttctttgtg tgagattttc catgcaattc atgggcggag aatactaagc 181 gaaaagcaaa aaatcaagca aaattgaaat agccaaagaa gaaagaaaat cggaatagtt 241 gaaattacca caaaagaaga agaagaatta ttggaaaaaa atctaactca agtgcttaat 301 taaggagtat ttttttgtgt gtgcgagaga gtgtgagtgg ggcaagagtg ggacacccta 361 agctcctacc cacctaccta cctacattat aaccacaagc gacagccata ccaacaccag 421 ctcatcgcca gcaactacga ctagtgttga ggggagcaag cgtcgttgtc ctatacgtct 481 taactggaaa gtaaagtgaa gttttgctat ttttccccta atatttttta aaaggggtgt 541 gccacgcaaa aaaaatataa agaaatagta gaaaaagaaa ttgctgagga ttttgtgcta 601 aaaattgttt aaagtaaatt tgcaaattcg ctgagatttt cttttctcaa atacagatac 661 gtaaacagtg ttggcaactt ttcgtgagat accaaaaaaa aaaccccgaa tatttttaca 721 ctcgaacggt gaaaaataga aacaagtgaa acatttacgt catatgtatt gagttgcttg 781 cgaagaaaag gaaagtttaa accgatttca attgctaacg cacagacttt gctggcaagg 841 atttgtggaa aaatcaccaa aaaatcttga aactcttttc aaaacacaca tcaactacat 901 ttggatctaa gaatgtcgag gatactagca tggggcctaa tggctttagt ggccatcaca 961 gcgacgtcac aggtacaggc tgcttcacca cgttgggaac cacaaattgc agtactctgc 1021 gaagctggtc aaatctatca gccgcaatat ctttccgagg agggacgctg ggtaacagat 1081 ttgaataaga aatcaacggg cgcaacttgt ctgcgtgata aactcgattt gttggattat 1141 tgtaaaaagg cttatcccaa cagagatatc accaatattg tggagtcatc acactatcag 1201 aaaattggcg gctggtgtcg ccagggtgct ttgaatgcca acaagtgcaa gggagcccat 1261 cgttggatta aaccattccg gtgcttggga cccttccaat cggatgcatt attggtgccc 1321 gaaggttgcc tcttcgatca cattcacaat gcctcacgct gctggccatt cgttaggtgg 1381 aatcagaccg gtgctgctgc ctgtcaagag cgtggcatgc aaatgcgtag ctttgccatg 1441 ttgctgccct gtggcatctc cttgttttcg ggtgttgaat tcgtctgctg tccaaagcat 1501 ttcaaaaccg atgaaatccg tgtcaagaaa accgatttgc ctgttatgcc acccgtcgaa 1561 atggccaatc ccatcagtga tgatttagat gacatcagca gcgatgacaa tgattccaac 1621 tactccaagg ataccgccga cgatgttgaa gatgaagatg atgaggatga tttgttggct 1681 gatgatgagg aggatgaaat ggctgccgac gaggctaccg ccacgggtga tgatgtaaat 1741 gctgaatatg attctgggga ggataattat gaggaggatg ctgttgattc atatgatcaa 1801 caaggtagct ctagtggtgc caaaccatcg aataagccca atgcgaagga tgaaaagtca 1861 ggtggatcgt tggatggcgc agcaggcaag agcaacaatg gcgatttgcc aatgccaccc 1921 accactggtc agcccacacc cgatccctac tttacacatt tcgatccaca ctatgaacac 1981 cagagctaca aacgcctcga ggaatcgcac cgtgaaaagg tgacacgtgt catgaaggac 2041 tggtccgatt tggaagagaa atatcaggat atgcgtttgg ccgatcccaa ggcagcacag 2101 agtttcaaac aaagaatgac agcacgtttc caaacttctg ttcaggcact cgaagaagaa 2161 ggcaatgcag agaagcatca attggctgcc atgcatcagc aacgtgttct ggcccacatt 2221 aatcagcgca aacgcgaggc aatgacctgc tacactcagg ccttgactga gcaaccacca 2281 aacgctcacc atgttgaaaa atgcctgcag aaacttttgc gtgccctaca caaggatcgt 2341 gcccatgcct tggcccacta ccgtcacctg ttgaactcgg gcggagctgg tggtttggag 2401 gccgccgcct ctgaaagacc ccgcaccttg gaacgcttga ttgacattga tcgcgctgtc 2461 aaccaatcga tgaccatgct taaacgttac cccgaactct ccaacaagat ctctcagctg 2521 atgaacgatt acattttggc cttgcgcagc aaagatgaca ttcccggctc ctctttgggc 2581 atgagcgagg aggctgaagc agccattttg gacaaatatc gcattgaaat tgaacgcaag 2641 gtggccgaaa aggaacgttt gcgcctggcc gagaaacaac gcaaggaaca aagagctgcc 2701 gaacgtgaga aattgcgtga ggagaaattg agattggaag ccaagaaggt ggacgatatg 2761 gtcaaggccg agcaggactc tcaggcattc accagcgaag agtccaagac cagcaaagac 2821 gaatccatgg tagatcccac aaagatggct cacagtgata aggattcagc tgccgaggag 2881 tatgtggaag ccactctcag caccaaaacc caaaccatcc tacccaccgt ggatgatgag 2941 gccgttcaac gtgctgttga agatgttgcc gccgccgttg cccatcagga agctgaacct 3001 gccgtccagc atttcatgtc acacgatttg ggtcatcgcg aatcgagctt ctctctgcgc 3061 agagaattct ctcattcatc atctgcgcat gcgaataaag agggtcgcaa tgtctatttc 3121 acattgtcct ttgctggcat tgctcttatg gctgccatct ttgtgggcat tgctgttgcc 3181 aaatggagaa cagcacgctc gccacatgcg caaggtttta ttgaagttga tcagaacgcc 3241 gccgcccatc atcctgtggt ccctgaagag aaaatcgtgc cgagtatgca aatcaacggc 3301 tatgaaaatc ccacttacaa atattttgaa gtaaaagagt aaacttgcaa caaaaatcaa 3361 cacaaaacag caacaacaac aacaacaaat taaacacact tacttatata ataatgaaaa 3421 acaaaaccaa aaacagctac agattattca aaatgaagat ataagaacaa aaaacttttt 3481 atgaaaacat aaaaaaaaac caaatcaact atcccccaaa agaaaccata caca