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LOCUS XM_013250076 3546 bp mRNA linear INV 02-SEP-2023 (LOC106085709), transcript variant X10, mRNA. ACCESSION XM_013250076 VERSION XM_013250076.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250076.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3546 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3546 /gene="LOC106085709" /note="amyloid-beta-like protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085709" CDS 913..3354 /gene="LOC106085709" /codon_start=1 /product="amyloid-beta-like protein isoform X10" /protein_id="XP_013105530.1" /db_xref="GeneID:106085709" /translation="MSRILAWGLMALVAITATSQVQAASPRWEPQIAVLCEAGQIYQP QYLSEEGRWVTDLNKKSTGATCLRDKLDLLDYCKKAYPNRDITNIVESSHYQKIGGWC RQGALNANKCKGAHRWIKPFRCLGPFQSDALLVPEGCLFDHIHNASRCWPFVRWNQTG AAACQERGMQMRSFAMLLPCGISLFSGVEFVCCPKHFKTDEIRVKKTDLPVMPPVEMA NPISDDLDDISSDDNDSNYSKDTADDVEDEDDEDDLLADDEEDEMAADEATATGDDVN AEYDSGEDNYEEDAVDSYDQQGSSSGAKPSNKPNAKDEKSGGSLDGAAGKSNNGDLPM PPTTGQPTPDPYFTHFDPHYEHQSYKVSQKRLEESHREKVTRVMKDWSDLEEKYQDMR LADPKAAQSFKQRMTARFQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTC YTQALTEQPPNAHHVEKCLQKLLRALHKDRAHALAHYRHLLNSGGAGGLEAAASERPR TLERLIDIDRAVNQSMTMLKRYPELSNKISQLMNDYILALRSKDDIPGSSLGMSEEAE AAILDKYRIEIERKVAEKERLRLAEKQRKEQRAAEREKLREEKLRLEAKKVDDMVKAE QDSQAFTSEESKTSKDESMVDPTKMAHSDKDSAAEEYVEATLSTKTQTILPTVDDEAV QRAVEDVAAAVAHQEAEPAVQHFMSHDLGHRESSFSLRREFSHSSSAHANKEGRNVYF TLSFAGIALMAAIFVGIAVAKWRTARSPHAQGFIEVDQNAAAHHPVVPEEKIVPSMQI NGYENPTYKYFEVKE" misc_feature 976..1494 /gene="LOC106085709" /note="amyloid A4; Region: A4_EXTRA; smart00006" /db_xref="CDD:128326" misc_feature 1915..2493 /gene="LOC106085709" /note="E2 domain of amyloid precursor protein; Region: APP_E2; pfam12925" /db_xref="CDD:463752" misc_feature 2647..>2835 /gene="LOC106085709" /note="DDRGK domain; Region: DDRGK; pfam09756" /db_xref="CDD:370664" misc_feature 3169..3342 /gene="LOC106085709" /note="Beta-amyloid precursor protein C-terminus; Region: APP_amyloid; pfam10515" /db_xref="CDD:463129" ORIGIN 1 cggattttgt agacgcatct aggcgcatac acatcgagag agtttgctga attgtaaaat 61 tgaacccaaa aagccaacaa aagaagaaaa taaattggaa aaaaagaaaa tccaaattga 121 aaattgtgtg tttctttgtg tgagattttc catgcaattc atgggcggag aatactaagc 181 gaaaagcaaa aaatcaagca aaattgaaat agccaaagaa gaaagaaaat cggaatagtt 241 gaaattacca caaaagaaga agaagaatta ttggaaaaaa atctaactca agtgcttaat 301 taaggagtat ttttttgtgt gtgcgagaga gtgtgagtgg ggcaagagtg ggacacccta 361 agctcctacc cacctaccta cctacattat aaccacaagc gacagccata ccaacaccag 421 ctcatcgcca gcaactacga ctagtgttga ggggagcaag cgtcgttgtc ctatacgtct 481 taactggaaa gtaaagtgaa gttttgctat ttttccccta atatttttta aaaggggtgt 541 gccacgcaaa aaaaatataa agaaatagta gaaaaagaaa ttgctgagga ttttgtgcta 601 aaaattgttt aaagtaaatt tgcaaattcg ctgagatttt cttttctcaa atacagatac 661 gtaaacagtg ttggcaactt ttcgtgagat accaaaaaaa aaaccccgaa tatttttaca 721 ctcgaacggt gaaaaataga aacaagtgaa acatttacgt catatgtatt gagttgcttg 781 cgaagaaaag gaaagtttaa accgatttca attgctaacg cacagacttt gctggcaagg 841 atttgtggaa aaatcaccaa aaaatcttga aactcttttc aaaacacaca tcaactacat 901 ttggatctaa gaatgtcgag gatactagca tggggcctaa tggctttagt ggccatcaca 961 gcgacgtcac aggtacaggc tgcttcacca cgttgggaac cacaaattgc agtactctgc 1021 gaagctggtc aaatctatca gccgcaatat ctttccgagg agggacgctg ggtaacagat 1081 ttgaataaga aatcaacggg cgcaacttgt ctgcgtgata aactcgattt gttggattat 1141 tgtaaaaagg cttatcccaa cagagatatc accaatattg tggagtcatc acactatcag 1201 aaaattggcg gctggtgtcg ccagggtgct ttgaatgcca acaagtgcaa gggagcccat 1261 cgttggatta aaccattccg gtgcttggga cccttccaat cggatgcatt attggtgccc 1321 gaaggttgcc tcttcgatca cattcacaat gcctcacgct gctggccatt cgttaggtgg 1381 aatcagaccg gtgctgctgc ctgtcaagag cgtggcatgc aaatgcgtag ctttgccatg 1441 ttgctgccct gtggcatctc cttgttttcg ggtgttgaat tcgtctgctg tccaaagcat 1501 ttcaaaaccg atgaaatccg tgtcaagaaa accgatttgc ctgttatgcc acccgtcgaa 1561 atggccaatc ccatcagtga tgatttagat gacatcagca gcgatgacaa tgattccaac 1621 tactccaagg ataccgccga cgatgttgaa gatgaagatg atgaggatga tttgttggct 1681 gatgatgagg aggatgaaat ggctgccgac gaggctaccg ccacgggtga tgatgtaaat 1741 gctgaatatg attctgggga ggataattat gaggaggatg ctgttgattc atatgatcaa 1801 caaggtagct ctagtggtgc caaaccatcg aataagccca atgcgaagga tgaaaagtca 1861 ggtggatcgt tggatggcgc agcaggcaag agcaacaatg gcgatttgcc aatgccaccc 1921 accactggtc agcccacacc cgatccctac tttacacatt tcgatccaca ctatgaacac 1981 cagagctaca aagtaagtca aaaacgcctc gaggaatcgc accgtgaaaa ggtgacacgt 2041 gtcatgaagg actggtccga tttggaagag aaatatcagg atatgcgttt ggccgatccc 2101 aaggcagcac agagtttcaa acaaagaatg acagcacgtt tccaaacttc tgttcaggca 2161 ctcgaagaag aaggcaatgc agagaagcat caattggctg ccatgcatca gcaacgtgtt 2221 ctggcccaca ttaatcagcg caaacgcgag gcaatgacct gctacactca ggccttgact 2281 gagcaaccac caaacgctca ccatgttgaa aaatgcctgc agaaactttt gcgtgcccta 2341 cacaaggatc gtgcccatgc cttggcccac taccgtcacc tgttgaactc gggcggagct 2401 ggtggtttgg aggccgccgc ctctgaaaga ccccgcacct tggaacgctt gattgacatt 2461 gatcgcgctg tcaaccaatc gatgaccatg cttaaacgtt accccgaact ctccaacaag 2521 atctctcagc tgatgaacga ttacattttg gccttgcgca gcaaagatga cattcccggc 2581 tcctctttgg gcatgagcga ggaggctgaa gcagccattt tggacaaata tcgcattgaa 2641 attgaacgca aggtggccga aaaggaacgt ttgcgcctgg ccgagaaaca acgcaaggaa 2701 caaagagctg ccgaacgtga gaaattgcgt gaggagaaat tgagattgga agccaagaag 2761 gtggacgata tggtcaaggc cgagcaggac tctcaggcat tcaccagcga agagtccaag 2821 accagcaaag acgaatccat ggtagatccc acaaagatgg ctcacagtga taaggattca 2881 gctgccgagg agtatgtgga agccactctc agcaccaaaa cccaaaccat cctacccacc 2941 gtggatgatg aggccgttca acgtgctgtt gaagatgttg ccgccgccgt tgcccatcag 3001 gaagctgaac ctgccgtcca gcatttcatg tcacacgatt tgggtcatcg cgaatcgagc 3061 ttctctctgc gcagagaatt ctctcattca tcatctgcgc atgcgaataa agagggtcgc 3121 aatgtctatt tcacattgtc ctttgctggc attgctctta tggctgccat ctttgtgggc 3181 attgctgttg ccaaatggag aacagcacgc tcgccacatg cgcaaggttt tattgaagtt 3241 gatcagaacg ccgccgccca tcatcctgtg gtccctgaag agaaaatcgt gccgagtatg 3301 caaatcaacg gctatgaaaa tcccacttac aaatattttg aagtaaaaga gtaaacttgc 3361 aacaaaaatc aacacaaaac agcaacaaca acaacaacaa attaaacaca cttacttata 3421 taataatgaa aaacaaaacc aaaaacagct acagattatt caaaatgaag atataagaac 3481 aaaaaacttt ttatgaaaac ataaaaaaaa accaaatcaa ctatccccca aaagaaacca 3541 tacaca