Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013250073 3561 bp mRNA linear INV 02-SEP-2023 (LOC106085709), transcript variant X5, mRNA. ACCESSION XM_013250073 VERSION XM_013250073.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013250073.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3561 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3561 /gene="LOC106085709" /note="amyloid-beta-like protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085709" CDS 913..3369 /gene="LOC106085709" /codon_start=1 /product="amyloid-beta-like protein isoform X5" /protein_id="XP_013105527.1" /db_xref="GeneID:106085709" /translation="MSRILAWGLMALVAITATSQVQAASPRWEPQIAVLCEAGQIYQP QYLSEEGRWVTDLNKKSTGATCLRDKLDLLDYCKKAYPNRDITNIVESSHYQKIGGWC RQGALNANKCKGAHRWIKPFRCLEGPFQSDALLVPEGCLFDHIHNASRCWPFVRWNQT GAAACQERGMQMRSFAMLLPCGISLFSGVEFVCCPKHFKTDEIRVKKTDLPVMPPVEM ANPISDDLDDISSDDNDSNYSKDTADDVEDEDDEDDLLADDEEDEMAADEATATGDDV NAEYDSGEDNYEEDAVDSYDQQGSSSGAKPSNKPNAKDEKSGGSLDGAAGKSNNGDLP MPPTTGQPTPDPYFTHFDPHYEHQSYKVSQKEAQQRLEESHREKVTRVMKDWSDLEEK YQDMRLADPKAAQSFKQRMTARFQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKR EAMTCYTQALTEQPPNAHHVEKCLQKLLRALHKDRAHALAHYRHLLNSGGAGGLEAAA SERPRTLERLIDIDRAVNQSMTMLKRYPELSNKISQLMNDYILALRSKDDIPGSSLGM SEEAEAAILDKYRIEIERKVAEKERLRLAEKQRKEQRAAEREKLREEKLRLEAKKVDD MVKAEQDSQAFTSEESKTSKDESMVDPTKMAHSDKDSAAEEYVEATLSTKTQTILPTV DDEAVQRAVEDVAAAVAHQEAEPAVQHFMSHDLGHRESSFSLRREFSHSSSAHANKEG RNVYFTLSFAGIALMAAIFVGIAVAKWRTARSPHAQGFIEVDQNAAAHHPVVPEEKIV PSMQINGYENPTYKYFEVKE" misc_feature 976..1497 /gene="LOC106085709" /note="amyloid A4; Region: A4_EXTRA; smart00006" /db_xref="CDD:128326" misc_feature 1918..2508 /gene="LOC106085709" /note="E2 domain of amyloid precursor protein; Region: APP_E2; pfam12925" /db_xref="CDD:463752" misc_feature <2614..>3030 /gene="LOC106085709" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 2662..>2850 /gene="LOC106085709" /note="DDRGK domain; Region: DDRGK; pfam09756" /db_xref="CDD:370664" misc_feature 3184..3357 /gene="LOC106085709" /note="Beta-amyloid precursor protein C-terminus; Region: APP_amyloid; pfam10515" /db_xref="CDD:463129" ORIGIN 1 cggattttgt agacgcatct aggcgcatac acatcgagag agtttgctga attgtaaaat 61 tgaacccaaa aagccaacaa aagaagaaaa taaattggaa aaaaagaaaa tccaaattga 121 aaattgtgtg tttctttgtg tgagattttc catgcaattc atgggcggag aatactaagc 181 gaaaagcaaa aaatcaagca aaattgaaat agccaaagaa gaaagaaaat cggaatagtt 241 gaaattacca caaaagaaga agaagaatta ttggaaaaaa atctaactca agtgcttaat 301 taaggagtat ttttttgtgt gtgcgagaga gtgtgagtgg ggcaagagtg ggacacccta 361 agctcctacc cacctaccta cctacattat aaccacaagc gacagccata ccaacaccag 421 ctcatcgcca gcaactacga ctagtgttga ggggagcaag cgtcgttgtc ctatacgtct 481 taactggaaa gtaaagtgaa gttttgctat ttttccccta atatttttta aaaggggtgt 541 gccacgcaaa aaaaatataa agaaatagta gaaaaagaaa ttgctgagga ttttgtgcta 601 aaaattgttt aaagtaaatt tgcaaattcg ctgagatttt cttttctcaa atacagatac 661 gtaaacagtg ttggcaactt ttcgtgagat accaaaaaaa aaaccccgaa tatttttaca 721 ctcgaacggt gaaaaataga aacaagtgaa acatttacgt catatgtatt gagttgcttg 781 cgaagaaaag gaaagtttaa accgatttca attgctaacg cacagacttt gctggcaagg 841 atttgtggaa aaatcaccaa aaaatcttga aactcttttc aaaacacaca tcaactacat 901 ttggatctaa gaatgtcgag gatactagca tggggcctaa tggctttagt ggccatcaca 961 gcgacgtcac aggtacaggc tgcttcacca cgttgggaac cacaaattgc agtactctgc 1021 gaagctggtc aaatctatca gccgcaatat ctttccgagg agggacgctg ggtaacagat 1081 ttgaataaga aatcaacggg cgcaacttgt ctgcgtgata aactcgattt gttggattat 1141 tgtaaaaagg cttatcccaa cagagatatc accaatattg tggagtcatc acactatcag 1201 aaaattggcg gctggtgtcg ccagggtgct ttgaatgcca acaagtgcaa gggagcccat 1261 cgttggatta aaccattccg gtgcttggaa ggacccttcc aatcggatgc attattggtg 1321 cccgaaggtt gcctcttcga tcacattcac aatgcctcac gctgctggcc attcgttagg 1381 tggaatcaga ccggtgctgc tgcctgtcaa gagcgtggca tgcaaatgcg tagctttgcc 1441 atgttgctgc cctgtggcat ctccttgttt tcgggtgttg aattcgtctg ctgtccaaag 1501 catttcaaaa ccgatgaaat ccgtgtcaag aaaaccgatt tgcctgttat gccacccgtc 1561 gaaatggcca atcccatcag tgatgattta gatgacatca gcagcgatga caatgattcc 1621 aactactcca aggataccgc cgacgatgtt gaagatgaag atgatgagga tgatttgttg 1681 gctgatgatg aggaggatga aatggctgcc gacgaggcta ccgccacggg tgatgatgta 1741 aatgctgaat atgattctgg ggaggataat tatgaggagg atgctgttga ttcatatgat 1801 caacaaggta gctctagtgg tgccaaacca tcgaataagc ccaatgcgaa ggatgaaaag 1861 tcaggtggat cgttggatgg cgcagcaggc aagagcaaca atggcgattt gccaatgcca 1921 cccaccactg gtcagcccac acccgatccc tactttacac atttcgatcc acactatgaa 1981 caccagagct acaaagtaag tcaaaaagaa gcccaacagc gcctcgagga atcgcaccgt 2041 gaaaaggtga cacgtgtcat gaaggactgg tccgatttgg aagagaaata tcaggatatg 2101 cgtttggccg atcccaaggc agcacagagt ttcaaacaaa gaatgacagc acgtttccaa 2161 acttctgttc aggcactcga agaagaaggc aatgcagaga agcatcaatt ggctgccatg 2221 catcagcaac gtgttctggc ccacattaat cagcgcaaac gcgaggcaat gacctgctac 2281 actcaggcct tgactgagca accaccaaac gctcaccatg ttgaaaaatg cctgcagaaa 2341 cttttgcgtg ccctacacaa ggatcgtgcc catgccttgg cccactaccg tcacctgttg 2401 aactcgggcg gagctggtgg tttggaggcc gccgcctctg aaagaccccg caccttggaa 2461 cgcttgattg acattgatcg cgctgtcaac caatcgatga ccatgcttaa acgttacccc 2521 gaactctcca acaagatctc tcagctgatg aacgattaca ttttggcctt gcgcagcaaa 2581 gatgacattc ccggctcctc tttgggcatg agcgaggagg ctgaagcagc cattttggac 2641 aaatatcgca ttgaaattga acgcaaggtg gccgaaaagg aacgtttgcg cctggccgag 2701 aaacaacgca aggaacaaag agctgccgaa cgtgagaaat tgcgtgagga gaaattgaga 2761 ttggaagcca agaaggtgga cgatatggtc aaggccgagc aggactctca ggcattcacc 2821 agcgaagagt ccaagaccag caaagacgaa tccatggtag atcccacaaa gatggctcac 2881 agtgataagg attcagctgc cgaggagtat gtggaagcca ctctcagcac caaaacccaa 2941 accatcctac ccaccgtgga tgatgaggcc gttcaacgtg ctgttgaaga tgttgccgcc 3001 gccgttgccc atcaggaagc tgaacctgcc gtccagcatt tcatgtcaca cgatttgggt 3061 catcgcgaat cgagcttctc tctgcgcaga gaattctctc attcatcatc tgcgcatgcg 3121 aataaagagg gtcgcaatgt ctatttcaca ttgtcctttg ctggcattgc tcttatggct 3181 gccatctttg tgggcattgc tgttgccaaa tggagaacag cacgctcgcc acatgcgcaa 3241 ggttttattg aagttgatca gaacgccgcc gcccatcatc ctgtggtccc tgaagagaaa 3301 atcgtgccga gtatgcaaat caacggctat gaaaatccca cttacaaata ttttgaagta 3361 aaagagtaaa cttgcaacaa aaatcaacac aaaacagcaa caacaacaac aacaaattaa 3421 acacacttac ttatataata atgaaaaaca aaaccaaaaa cagctacaga ttattcaaaa 3481 tgaagatata agaacaaaaa actttttatg aaaacataaa aaaaaaccaa atcaactatc 3541 ccccaaaaga aaccatacac a