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PREDICTED: Stomoxys calcitrans mediator of RNA polymerase II


LOCUS       XM_013250036            1127 bp    mRNA    linear   INV 02-SEP-2023
            transcription subunit 8 (LOC106085687), mRNA.
ACCESSION   XM_013250036
VERSION     XM_013250036.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013250036.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1127
                     /gene="LOC106085687"
                     /note="mediator of RNA polymerase II transcription subunit
                     8; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:106085687"
     CDS             306..1070
                     /gene="LOC106085687"
                     /codon_start=1
                     /product="mediator of RNA polymerase II transcription
                     subunit 8"
                     /protein_id="XP_013105490.1"
                     /db_xref="GeneID:106085687"
                     /translation="MSREEKQLDMTLDAVQNRLNDLKISIGAMVHKLETEYEYINWPT
                     FLDNFALISSHLTGLSKILSKEICPPLRNRTVLPLMLSPERDELLLNITQGRVPVFSH
                     DIVPDYLRTKPDPVAEQKMLQNEQKAANLSTEAASKQVTQHNKVVSHILDMVSKKREE
                     WDIESSSRAGIQQTSSMADTHALVAAVGMGKGLKIGMPLQVPGGGPASMMVPPAIRPP
                     APMSSVSPGGVNQLGKAPSAIKTNIKSAMQVHPFQR"
     misc_feature    306..1058
                     /gene="LOC106085687"
                     /note="Mediator of RNA polymerase II transcription complex
                     subunit 8; Region: Med8; pfam10232"
                     /db_xref="CDD:463012"
     polyA_site      1127
                     /gene="LOC106085687"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaagtgatag ccgatatacc tcgttaatca aaataacatg tcttgttgga aaccccaaat
       61 gttcgctgtt tgaaacgaaa accaacactt ttcgcattta cttttctatt gcaatgccaa
      121 aggaaacatt ctttgggtgt actctgtata tattcaacac atagcattca gctttcatat
      181 atgtcattgc ctcttaacag ttgcttaaaa aagtaacaaa catatggtac caaatgcgac
      241 atccctgtag aatttgttta ttattgaatc tagttaaaag gaaagctatc tgaagagaat
      301 tcaccatgtc tcgggaggaa aaacaattgg atatgacctt ggatgctgtg cagaatcggc
      361 ttaatgattt gaaaatatca attggtgcca tggtacataa attagagaca gaatatgaat
      421 acataaattg gcccaccttt ctggataatt ttgctctgat ttcaagtcat cttactggcc
      481 tttctaaaat cttatcgaaa gaaatatgcc cgcccttacg aaaccgcacc gtcctacctt
      541 taatgctctc acctgagcgt gatgaacttc tgcttaacat aacacaggga cgagttccgg
      601 ttttttctca cgacattgtt ccagactact tgcgcaccaa acccgatcca gttgcagaac
      661 aaaaaatgct tcaaaatgaa caaaaagcag cgaatttgtc aaccgaggcg gcttcaaagc
      721 aagtaacaca acacaataaa gtcgtatctc atatcctgga tatggtgagt aaaaagcgtg
      781 aagaatggga tattgaatct tcatccaggg caggcataca acagaccagc agtatggccg
      841 atacacatgc cttggtggcg gctgttggca tgggtaaggg gttgaaaata ggaatgcctc
      901 tacaagtgcc aggtggtggg ccggccagca tgatggtacc accagcaata cgtccacctg
      961 cccccatgag ctctgttagc ccaggaggag tgaatcaatt gggcaaagct ccttcggcta
     1021 ttaagacgaa cattaagtca gcaatgcaag tgcatccatt tcaaagataa aaggtttcat
     1081 ctggagtaaa taaatcatgt accatatacc ttatgggtta tacatta