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PREDICTED: Stomoxys calcitrans hepatic sodium/bile acid


LOCUS       XM_013250031            1960 bp    mRNA    linear   INV 02-SEP-2023
            cotransporter (LOC106085684), transcript variant X4, mRNA.
ACCESSION   XM_013250031
VERSION     XM_013250031.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013250031.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1960
                     /gene="LOC106085684"
                     /note="hepatic sodium/bile acid cotransporter; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:106085684"
     CDS             440..1885
                     /gene="LOC106085684"
                     /codon_start=1
                     /product="hepatic sodium/bile acid cotransporter"
                     /protein_id="XP_013105485.2"
                     /db_xref="GeneID:106085684"
                     /translation="MNSLKKLLVLCVLITQLLDLSHTQSIINGTSPLEDEVLFTLDDF
                     VSGPAWSVSFSEKKLNMSMTDISIIQLTITDIDPAWGSDYEFHILAEDNEVVLLTQNV
                     IKSKDIKPGDTTWHGNFTAEGLFIGHSPIYVELRRPQQQPEVALEKLQLIVLRKIGTM
                     DYVFQILVGIFVMALYTNFGAVLELDALKQILIRPIGPLIGFLGQFVVMPVLSFFIGY
                     LLFRDMIELRLGLFFTGSTPGGGASNIFTVVLNGNLNLSITMTAISNLAAFGMMPLWI
                     FTLGALIFKDGNLVVPYKTIATMSFSLVIPLSIGIAMQKYYPNMAKKMSKLLKPFAFG
                     FILIIMVFAFTVNSYMFKLFSWKILIASSALPWIGYVIGWLMAIICRQSPRDALTIAI
                     ETGIQNTGIAIFMLNFALPQPQADMTSAVPVASSMVTPLPLLVIYVIRKIFCRSSMER
                     VEKSSSAITKDTKLAEIEAMMEKSEKSDWHK"
ORIGIN      
        1 acgggattgc ttaaagcgtt tgcactacaa ttcgtttatt ggcggcaaaa tccgacggtg
       61 aagagcaaaa atatatatcg gccactttag aactaaacaa atagactgcg atcgagtaca
      121 ataaaaagcg tgctgccaaa aataaagatc atatcagaaa attttcgttt aaataccacg
      181 attatcaaga agttgtccac agttgcggca acgaaagagc ccaaaaatat actcgtcaaa
      241 taattgaaat attaagaaaa aataactaaa aaattgatat tggagaacat aaatcaaatt
      301 aagagttgga tgaacgggcg gatagacatc caagcttgaa aaggataaag tcctttagtg
      361 aacaaaaaac aaaaacacaa ctcgaataag ttcgaaatta aacaacagtg tacaaaaaat
      421 accacagcac aactaagaaa tgaattccct caaaaaactt ttagttctgt gtgtattaat
      481 tacccaattg ttagacttat cccatacaca aagtattata aatggaacct cccccctcga
      541 ggatgaagtt ctgtttacac tggatgactt tgtcagtggc ccagcatggt cggttagttt
      601 ctcagaaaag aaattaaaca tgtccatgac cgatattagc attattcagc taacaatcac
      661 ggatatagac ccagcctggg gatctgacta tgaatttcac attctagccg aggataatga
      721 agtagtgttg ctaacacaaa atgttataaa atccaaagat attaagcctg gagacaccac
      781 atggcatgga aatttcaccg ccgagggttt atttattggc cacagtccca tatatgtgga
      841 actgcgcaga cctcaacagc agccagaagt ggccttggaa aagctgcaac tcattgtttt
      901 acgtaaaatt ggcaccatgg attatgtatt tcaaattcta gtgggaattt tcgtcatggc
      961 cttgtataca aactttggag ctgtgctaga gttggatgcc ctcaagcaga tacttattcg
     1021 accaattgga cctcttattg gatttttggg ccagtttgtg gttatgcctg tattgagttt
     1081 tttcataggc tatttgctgt ttcgcgatat gattgaattg cgtctgggtc tattctttac
     1141 cggctctaca ccaggtggtg gtgcttcaaa tatattcact gtggttctta atggaaattt
     1201 gaatttgtcc ataaccatga cggccataag taatttggct gcctttggca tgatgccctt
     1261 gtggatattc accttgggag ccttaatctt caaggatggt aatttggtgg tgccttataa
     1321 gaccattgcc accatgtcct tctcattggt catcccgctg agtattggca ttgctatgca
     1381 gaaatattat cccaatatgg ccaagaaaat gtctaagctg ttaaaaccct tcgcctttgg
     1441 atttattctg ataattatgg tgtttgcatt tactgttaat tcctacatgt tcaaattgtt
     1501 ctcatggaag attttaattg ccagcagtgc attgccatgg ataggctatg taatcggttg
     1561 gttgatggcc atcatttgtc gacaatcgcc acgtgacgcc ttaaccattg ccattgagac
     1621 gggcatacaa aataccggta ttgcaatttt catgttaaac tttgccttgc cacaacccca
     1681 ggctgatatg accagtgctg taccggtggc aagttcaatg gtcacgccat tgccattgct
     1741 ggtgatctat gtgataagga aaatcttttg tcgctccagc atggaacgag tggagaaatc
     1801 atctagcgcc attaccaaag ataccaaact cgcagaaatt gaagccatga tggagaaaag
     1861 tgaaaaatcc gattggcata aatgaaaaca acgaaattgc ctacatttat acaattatgt
     1921 gataaaattg tgatgttatt atttccaaga aataaatttt