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LOCUS XM_013249995 2425 bp mRNA linear INV 02-SEP-2023 (LOC106085665), transcript variant X5, mRNA. ACCESSION XM_013249995 VERSION XM_013249995.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249995.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2425 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2425 /gene="LOC106085665" /note="ubiquitin-conjugating enzyme E2 Q2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106085665" CDS 260..1414 /gene="LOC106085665" /codon_start=1 /product="ubiquitin-conjugating enzyme E2 Q2 isoform X3" /protein_id="XP_013105449.1" /db_xref="GeneID:106085665" /translation="MACLNTLKLEIKTLEKIFTKNHERFQILNSSVDELTCRFIGKSG KRYDIHANITETYPSSPPVWFAESEETSVTNAVQILSNTNGRDNHVINQVGILLRELC RLHNVPLPPDIDNLTIPFQLPPPTSSSSLNQQPAAQHQIEDIESDQDDIEDPIGDSEQ ESEADEDLPLEMDDGRSTNKKDEMEVEHLATLERLRQSQRQDYLKGSVSGSVQATDRL MKELRDIYRSDSFKSNMYSIELVNDSIYEWNIRLKSVDPDSPLHNDLIMLKEKEGKDS ILLNIIFKETYPFEPPFVRVVHPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQ IAATLVKGKARIQFGATKGQYSLARAQQSFKSLVQIHEKNGWFTPPKEDG" misc_feature 905..1372 /gene="LOC106085665" /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain of ubiquitin-conjugating enzyme E2 Q1, Q2, and related proteins; Region: UBCc_UBE2Q; cd23802" /db_xref="CDD:467422" polyA_site 2425 /gene="LOC106085665" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctcacgctct ggcgaaagtg atttttactg cacagcatcg gacgtcgggt cgggtttatt 61 aaattacaaa agaataaaat aaaatcaatt ttaggtcaga aaacatcttc cccatttacc 121 ttgattttgc cgctgtttca acgccgatat atcgcagaga cataacgagc gcgtgcgcgt 181 ttattttttg gcgtaaaatc gcttcagcga tttgtggcgt ttttgtgtaa gcaatatcgt 241 cgacgttgct caagacacca tggcgtgtct caacacattg aaattggaaa taaaaacctt 301 ggagaaaatc tttaccaaga atcatgaacg ctttcaaatt cttaactcga gtgtggacga 361 gctgacttgc cgtttcattg gaaaaagcgg aaaacgttat gacattcatg caaatataac 421 ggaaacgtat ccatcatcac ccccagtttg gtttgccgaa agtgaagaga caagcgtaac 481 aaatgctgtt cagatactaa gcaatacaaa tggtcgtgat aaccatgtta taaatcaggt 541 tggcatatta ttgcgagagt tatgccgcct acacaatgtt ccactgccgc ccgatataga 601 caacctcaca ataccgtttc agttgccacc acctactagt tcatcatctt tgaatcaaca 661 gcctgcagct cagcatcaaa tcgaagatat cgaatcagac caagacgata tcgaagatcc 721 cataggggat agtgaacaag aaagcgaagc agatgaagat ctacccttag aaatggacga 781 tggccgcagt acgaataaga aggatgaaat ggaagttgaa catttagcaa cattggaaag 841 actgcgtcaa agtcaacgac aagactatct aaagggttca gtttcgggtt ccgttcaagc 901 aaccgatcgt ttaatgaaag aattacgtga tatatatcgt tcagattcgt ttaagagcaa 961 tatgtactcc atagaattag taaatgactc catatacgaa tggaatatac gccttaagtc 1021 cgttgatcca gacagcccac tacacaacga tttgattatg ctcaaagaaa aagaaggcaa 1081 agatagtatt cttttaaata ttatattcaa agaaacctat ccctttgaac caccattcgt 1141 tcgcgttgta catcccataa tatcaggtgg ttatgtctta gtgggagggg ccatttgcat 1201 ggaattactt accaaacaag gctggagttc cgcatacaca gtggaagcgg ttataatgca 1261 aattgcagca acattagtta agggcaaagc cagaatacaa ttcggcgcaa ctaagggtca 1321 gtacagtttg gcgagagcgc agcagagttt taaatccctt gttcagatac atgagaagaa 1381 tggttggttt acacccccca aagaggatgg ctaagataag attagaagtt acaaagttct 1441 tatgttccag cagacaccca ccaccaccac caccaccagc tccaccacca atatcccata 1501 aaaacacatt accataatag tctctatcaa gctgcttaga agtttttatg ttgtgtctct 1561 ttggtgtagc cgccaaaaac ctactgctcc ttctacttct aatccccatt atcaccaatt 1621 tcatcatttg cccccgacgg atgaatggtt cttgtgatgt gtattcccgt ctcttttgtg 1681 taattataat actttccaat gtaatagcgt actctaggac tcttttatct ttatgtacat 1741 caagaagatg ttgttgtctc tgcaaacaac attgtccttt ctgactctga acacagcatc 1801 catgagatca gccagccacc acagcagaaa cattgaaatc ttcagcaaca tcaaggaatt 1861 atgttcctct tctagtgctc cgctttataa atatcaatcc aaacaaccaa tcatacaaaa 1921 tactatctac ttctatattc tattgcaacg tagtagtttg tagtttctgt aataattttt 1981 gtcataggat attctctcct tttttaaatt taaatattga taaatatttg tatctgtact 2041 gtactgtatc gtcgtttatt tttctttttt tctgttcctt ttaccagcgg gaagcgttta 2101 tgaaatcact ttaatcttcc taccagctct tagtttttat ttcacgtttt tttaatttta 2161 atcttttttt ttggtttaaa aaacattgaa aaatttataa atatacatat aaaataataa 2221 taaaattact taaattatag cattaaacaa atataacaaa acatgaatta aaatacaaaa 2281 aaaaaaaaca taaatagttc tattttattt gtgttttgca aaacagaaga aaatgaaaca 2341 caaaactgat gtttgatgga gtcgtcgaga agatgaaaga taaaaaagaa tatctgtaat 2401 ttttaagttt tacatataca acaaa