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LOCUS XM_013249990 5951 bp mRNA linear INV 02-SEP-2023 (LOC106085664), transcript variant X1, mRNA. ACCESSION XM_013249990 VERSION XM_013249990.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249990.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5951 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5951 /gene="LOC106085664" /note="uncharacterized protein DDB_G0288805; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106085664" CDS 2014..3249 /gene="LOC106085664" /codon_start=1 /product="uncharacterized protein DDB_G0283357 isoform X1" /protein_id="XP_013105444.2" /db_xref="GeneID:106085664" /translation="MTLPSITPNNQCDDDSDMFGPPRTSPPIGYHHHRSRVPMISPKL RQREERKRILQLCAHKLERIKDSETNLRRSVCINNTYCRLTDELRREKQSRYLANLPR TENKPESARDNIFNPYNSCSLDQPLSKAQQQQNENSQLQQNSMQKTENSFNSSSSSSS ANAIASPLACSQQNNNHNSMSSSSSLHHHHHHHHNGHNSDTLGSCHLSEMNGSSNPLN SHYSPSIANNANHNNSANSNSNTTVPMRKRCSSSNNIDKDLEILDRELSAINSPMPMI DPEITQGAEQLEKALSSRKRQRSEDESDRLVREALTQFYIPPQRLISAIDDCPLDMVN VGSLSPKRPKMSGGPNDLDLEFDMNQNQKDFEVIMDALRLGSPSPTPSVGSDSCGQAA MMSESANVFHNLVVTSLET" polyA_site 5951 /gene="LOC106085664" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cctggctgtt gtatgatgtg tattcagtcg gtttgctaca atcaaacgaa ccgaacattt 61 tcttttgaaa cggtgatact ctggttcagt tcaatgcgaa cgtgagaacg gtgtggacgt 121 gccaaaaata ctacgcggaa catcgtaata ataaataaca aacagaaaag aaagaaaatt 181 gtatatgaac tgtagtacta aagacaagcc aacccacaag aagcaaaagt cagccagcca 241 actaaagaaa aaatatatca acaacaacac atttatatat gatacaatac aacaatgcaa 301 aaaaattaat ttcattaatt aattatgata ttttaatttc tgtaacaaag caaataaaga 361 aaaaaaaaaa caaattagtg caattattat gaaatgaaaa ttattatttc tttttttgaa 421 acaaaacaaa aactcacaat ataattgcca attgaaaaaa aaaactaaaa tttacaaaat 481 aaaaactttc cccaaaaact aagttaaagc ttatagaaat ttcaaaagtc ctggattatt 541 ttgaatattt ctgctttaca aaacaaaaaa tataaatctg gttcctttcc caagcatatt 601 tgaaaaatct ctaaactttt taaaagtttt atgccattct cagaaaaaaa ttgtgttttt 661 tttttaatct cagaaattat aattattgtg aaaacaatta aatcaaactt ctgttgaact 721 gtgattttct gcaaaacaca caaaaatctc agcaataatt gttaagcaaa acaaaagaaa 781 agaaaaaaca tcactttgtg tgttgaaaaa ttattttttt tttataagaa attgtggttt 841 accttgcatt aacaacaatc acttaataac aaaagcaaca aaaacaagca ttattatcat 901 cacaccaaca accacaaaaa ctttgtggaa gagaagaaaa gaaaaatctc aaaacaaaag 961 caaaaaacca acaacataag cataaaaatt gcgtttgtga ctttgcaaaa atttgtttaa 1021 aaaaaaatcg ctcacaaaca aacatacaac caatctcata caaagtggaa aaaccagtta 1081 ataattttag tgctcttaaa agtgtaggac aaacatttgg ggataaccct tagcaaaaac 1141 aaaacaaaaa aaaacccctt tattgaactt aaaaattcct cgatttcatc tcgtagatac 1201 cctaacatca aaggctatcg ataacagcag caacaaaaac aaccaataca acggttaaca 1261 gcgtcaaggt atttccccta ttgagtgagt gacgttacaa attaaaaatc atcacgaacc 1321 aaaaagtccc agcaccatca tcacaacaac aatattaata cgagtaagca tacaagaaca 1381 gtgtcgtcgt cgtcgtcatt actgttggca ttaaaacgaa attataacaa caagaacaac 1441 agcagtagtg tgtggcgaaa aaaaaagaaa cgcaaactca acacacttta caaacaatta 1501 tcaatcatta agcaaaagag agcctactac aaagtgagtg agtgaatgag tgtgagagtg 1561 ccagaagagt gacaaccact tggcagcaac ctaccaaata acccaacaag caagagagca 1621 atctcaaaat caactcttga aaagtaagaa gaaaaaacaa aacaacagac ccatagacag 1681 gcagagagag aaagtgtggt gataaaccaa gccatctagc aagcgacccc aaacaagagt 1741 aaaatttata acggtttccc aaagcacaca caccttacct cacaccaaac gccagcagca 1801 agcagcagca gcccatcaac gtttgggggt acaaacaaaa gaaaggcaaa aaaaaaacaa 1861 tacaaacccc aaagtctttt tttacaagtg caaacggccg gaacaacaaa gacacttaac 1921 ttagacccca cacaaaacaa aaaaaaaccc aacaccccac cccctcccac caacaacaac 1981 aacaacaacc aacaaagtaa caaaaacacc aaaatgacct tgcccagcat aacgcccaac 2041 aatcaatgtg acgatgattc cgatatgttt ggaccaccac gtacctcacc acccattggc 2101 tatcatcatc atcgatcgcg tgtgcccatg atttcgccca agctgcgtca gcgcgaggaa 2161 cgcaaacgca tactgcagct gtgtgcccac aaattggaac gcattaagga ctcggaaacc 2221 aatttgagac gcagtgtatg cattaacaac acctattgtc gtctaaccga tgaattgaga 2281 cgtgaaaaac aatcccgcta tttggccaac ttaccaagaa ctgaaaacaa acccgaatcg 2341 gcccgcgaca atatcttcaa tccctacaat agctgcagtc tggatcagcc attgagtaaa 2401 gcacagcagc aacaaaatga aaactctcaa cttcaacaaa attccatgca aaaaactgaa 2461 aattcattca actcgtcatc gtcttcgtct tcagccaacg ccattgcatc tcccttagcc 2521 tgtagtcaac aaaataacaa ccacaattcc atgtcctcct catcatcatt acaccatcat 2581 caccaccatc atcacaatgg ccacaattcg gatactttag gcagctgtca tctcagtgaa 2641 atgaatggca gcagcaatcc attgaactcg cattattcac catcaattgc caataatgcc 2701 aatcacaaca acagcgccaa ctccaattcc aataccaccg tacccatgcg caagcgttgc 2761 tcgtcctcca ataacattga taaagatctt gaaatactcg atcgtgaatt gagtgccatc 2821 aattcaccta tgcccatgat tgatccggaa attacccaag gtgctgaaca attagagaag 2881 gccttgtcgt cgcgcaaacg tcaacgcagt gaagacgaaa gtgatcgctt ggtgcgtgag 2941 gctttgacac aattctatat accgccacaa cgtttaatat cggcaatcga tgattgcccc 3001 ttggatatgg tcaatgtggg tagcctctca cccaaaaggc caaaaatgtc tggggggccc 3061 aatgatttgg atttggaatt cgatatgaat caaaatcaaa aggatttcga agttataatg 3121 gatgctttac gcttgggctc accaagtccc acgcccagtg tgggtagtga tagttgtggc 3181 caggcggcca tgatgagcga atcggctaat gtttttcata atttggtggt aacctcgttg 3241 gaaacatgaa aattccagta aaaacaaagg cgatgaaaaa aaaaacagcg aatactacta 3301 gttataaacg aaaagaaaaa gaagaagcga aagccagaga gcgagagaga aaaggcgtca 3361 ggagaaagca aatcaaattt gctgccaacc tttttccttt ttactatgct tgtatggata 3421 gttaattttc tcccttgcaa acactttgga aaattacata aagaattctt taaacatttt 3481 ttgtaaaaaa aagcaaaaat ttaaacacaa aaatgtgaga gatttttttt gcataatttt 3541 tttcctagaa ccataatttc cacctaccaa ccaaccaacc aaacccaaaa catttgtaca 3601 ttctctttgt ttgtattaca acacttaaag attacaaaaa aaaacgaaaa aaatacctac 3661 cccttaaaca tatttagtaa aaaaaactct aaaaatatta ttattagcct aagagatttg 3721 tagtaaaaat caagtttaaa aattatatac ttaaacgctt caatttttat atagcaaaaa 3781 caaaaatcaa cactttatta cataaaaaaa cacaaaccgc gcttcatata ctatgtatgt 3841 atgtatattg tacagacaat tgtacttgta taagtttcta taaattagtt taaatgccaa 3901 caaacacaca cacacatata tgtatatata tatatacata taaagcctac atttaagatt 3961 tgctaaagaa agataaaaac ccacacaaca aaaattttta ctaataatca aagaatttat 4021 agtcaaaaca caacaactat aaaatgggaa aaaccaacta agaaatgaaa attaaacttt 4081 ttctaaagga taatcctaaa aacccgcgtt taaaaaaaaa tactctcaag aaactgttag 4141 aaacaactct gttttttctt taagttccaa taagcagctt tgtaagacaa aacaaacaaa 4201 caaaacacct ccaagaaaaa acacaactaa tttaaacagt ttcctagtca ccttaaactc 4261 acctttaaac agcaacacaa acacaacaac aatagttatt gttttcttta acctaacttc 4321 gcaagaaaaa ctatgtaaaa aacaaacgct agctaaaacc ataaaataga aggtttcact 4381 ttttctaaag caattgtcaa cactgattta ttgcatcata gcaacagcag gcgtgttgcc 4441 agtgtcaatg gctaactctt gcatacacac aaataccgca agcacagtgt tgtatgttct 4501 actcttgttt tgtgacacct gtaaccgtta ggcctctctc gcattcactg atattctaaa 4561 tgagtagtat agagcagaga ggtggcttaa gctctctctt tctcttgcat atactgatat 4621 cttgaatgtg tgcgatacaa agcagagaga caaatacggc aactctttct gttctactcc 4681 acacctacaa ccatttgcct ataaggctgt ttttgttgta tttgttcgag gataaagatc 4741 aaaaaataaa taaaagatat cgaaattttt ttcgtttgta gataatcaat gaaaataaga 4801 gcaaaaacat ttctggcaat ttgataaaca gtatttcaca aaaagaaaat ctcaatacca 4861 tacaaaaaga aaacattttt ggttttgttt tttgttttga aaaaagtgca attagtattt 4921 ggagtaaaat tcaagtaaat gtaacaatta aaagcctcaa caaacataca atttttttgt 4981 tgcaaattaa agaaaaataa tatagaacaa caaaagtaaa acaaaaacat attaagaaga 5041 aattacacaa caacaacaac atgaaaaccg acaacaacaa caaccacaac aacaacaaag 5101 agtaaaaaaa taaaattttt tggaacattt gtagtaattt attaagaatt tagaaattgt 5161 ttattttcaa aatatggctg tgatagtaat ttaagttcat aattttaagc atacaaaaac 5221 aaaacagaaa caacaacaac aaacaaacaa ctcatattaa aagaaatccc caaaaatccc 5281 acaaaatttt ggacacaaaa acaacaaata gacaacaaca aaaacagctg aaacacaacc 5341 acaacaacta aaaaacatta ttaacaaaaa gaaagtagta gtataaaatt tacattatat 5401 ataaaaaata aataaaatcg acaaaaacaa aaaaccaagt acattataac atttacatac 5461 atacattaat atgctttaaa atgacaaaac aacaaaacaa aattgcaaaa aaaaaatgaa 5521 aaaaatatta taaaattttt ttatttcttt atttgcctca ggattttttt cttttaggtt 5581 tggcttagaa aaatctttac ggactattgt tccaaaattt ttgcattctt tctttttgtt 5641 tcttttttta aatgttacaa acttgaaaaa attaaatttg ttttgttttt tttagtttaa 5701 ttttgttgct gccttatatc aagaaaagaa aaatttattt cgaaaaaact cacaattgtt 5761 gaaaactttt acagaaatcc aaaaaaaaag aatttctttt cgctttttat cttttgttaa 5821 tatattttta ataattttaa attacaaaaa aaaaacacaa aattgaaaaa attactttat 5881 tgaaaaaaag gcaaggagaa aagcaaaaca ccccacattt gtatattaaa aacaaaaaaa 5941 aaaagaaaaa a