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PREDICTED: Stomoxys calcitrans U3 small nucleolar RNA-associated


LOCUS       XM_013249986            1804 bp    mRNA    linear   INV 02-SEP-2023
            protein 15 homolog (LOC106085660), mRNA.
ACCESSION   XM_013249986
VERSION     XM_013249986.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249986.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1804
                     /gene="LOC106085660"
                     /note="U3 small nucleolar RNA-associated protein 15
                     homolog; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:106085660"
     CDS             95..1675
                     /gene="LOC106085660"
                     /codon_start=1
                     /product="U3 small nucleolar RNA-associated protein 15
                     homolog"
                     /protein_id="XP_013105440.2"
                     /db_xref="GeneID:106085660"
                     /translation="MTSFKPLNIKKYPKTGQVVTPDTEYWKRLSVPTLAKEFGAIDYI
                     DFSPIEPHYFAVTCSVRVQIYNPITKLVVKNLSRFQETAYGGTFRQDGRLLVAGDEQG
                     LVKLFDTSSKNVLRLFKGHKAPVHRVNFTSDLLHIVSFSDDKTVKLWDVASEKSIHTF
                     AEHEDYIRAGTVNPVSADVVVSGGYDGKIKLYDTRTREITMSVDHGSPVESLLFLPTG
                     GIFISAGGTEVRVWDAFAGCRLLTKLSQHHKTVTCLRLGSNGKRIMSGGLDRHVKIYD
                     VSSYQTVHTLDFPNAVLSLGVAPNDQTVVAGMVDGLISIQNMEAPAQPKQTKSRRRIN
                     VVPARADIEVDHQITIEQRQRLEKYDKHLKRYEYSKCLDSVMGRGLTSKSPEIIVSVM
                     QELIHRKGMHRALAPRDDNSLMQVISFICRYISEHRFMRVLIDVATILLDAYEDKIHT
                     FTGALGKKFLELSYVLEREVAMTYELLELQGSLELLTAASNVSSSQDNMIHFVRDDNI
                     ASNLKQSVMAKESSVVTV"
     polyA_site      1804
                     /gene="LOC106085660"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacagcgaaa caacaacaca tttttaccaa tcactttaat tttaaatgaa attttgcaaa
       61 attttattat aatttaagta aagataactt taaaatgacc agttttaagc ccctgaatat
      121 aaagaaatat ccaaagacgg gccaggtggt caccccagac accgaatatt ggaaacggct
      181 gagcgttccc actttggcca aggagtttgg tgctatagat tacatagact tttctcccat
      241 tgagcctcac tactttgcag tcacctgttc ggtgagggtg caaatataca atcccatcac
      301 aaagttggtc gtgaaaaacc tgtcacgttt tcaagaaact gcttatggag gcacatttag
      361 acaggatggt cgcctattgg tggctggcga tgagcaggga ttagtgaaat tatttgatac
      421 atccagcaag aatgtgttac gtttattcaa aggccataaa gctccggttc atagagtgaa
      481 ctttacttca gacctgttgc atatcgtcag tttttcggat gataagacag tgaaattgtg
      541 ggatgtggct agcgaaaaat ccattcatac atttgcggaa catgaagatt acatacgagc
      601 cggaacagtt aatcctgttt ctgcagatgt tgttgtctcc ggaggatatg atggcaaaat
      661 aaaattgtat gacacccgca ctagagaaat tacaatgagt gtagatcatg gcagtcccgt
      721 agaatcttta ttattcctac ccactggcgg tatattcatt agcgctggag gaactgaggt
      781 tcgagtgtgg gacgcctttg ccggctgccg cctattaaca aaattgtcac agcatcacaa
      841 aacggttacc tgtttgcgtc tgggatcgaa tggcaaacgt ataatgtccg gaggattaga
      901 tcgtcacgtt aaaatttatg atgtatcttc ataccagaca gtgcatacgc tggattttcc
      961 taacgctgtg ctaagtttag gcgtggctcc caatgaccaa acggtggtag ctggcatggt
     1021 ggacggtctg atttcgattc aaaatatgga agccccagct cagcctaagc aaacgaaatc
     1081 acgccgtaga ataaatgtag ttcctgccag agcggacata gaggtggatc accaaataac
     1141 tatagaacaa agacaacgat tagagaaata cgataaacat ctaaaacgtt atgaatacag
     1201 caagtgttta gattcggtga tgggccgagg ccttacatca aaatctccag agataattgt
     1261 gagtgtcatg caggagttaa ttcataggaa aggcatgcat cgcgccctgg ctccgcgtga
     1321 tgataactcc ctcatgcagg ttatcagttt tatatgccgc tatataagcg aacatcggtt
     1381 tatgcgagta cttatcgatg tggccacaat actgctagac gcctatgaag ataaaataca
     1441 tacattcacc ggagctttgg gtaaaaagtt tttggaatta tcttacgttt tagaacgtga
     1501 agttgctatg acttatgaat tactagagtt gcaaggttct ttggagttat taaccgccgc
     1561 ctcaaatgtg tccagcagtc aagataatat gattcacttt gttcgggatg ataatatagc
     1621 gtctaaccta aaacaatctg tcatggcaaa ggagtcttca gttgtgacag tttagaggtg
     1681 aaaaatattg caaaatttta ccaatataat tttaatttgt aaagaactat tttatagtga
     1741 acatacgagc atacgtgtga atctagattt aaatttgtta tcaaataaac ttaaatgtat
     1801 ggaa