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LOCUS XM_013249904 4404 bp mRNA linear INV 02-SEP-2023 (LOC106084568), transcript variant X4, mRNA. ACCESSION XM_013249904 VERSION XM_013249904.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249904.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4404 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4404 /gene="LOC106084568" /note="zinc finger protein 816; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106084568" CDS 150..3161 /gene="LOC106084568" /codon_start=1 /product="zinc finger protein 816 isoform X2" /protein_id="XP_013105358.1" /db_xref="GeneID:106084568" /translation="MLKHPPPSGHCRLCVKNCNDHHRSLYDETGQANANHDLVGKYFT NAMLNMEWEGHLHYVCGKCWQYIWEFHQFQQSVIEAQKVATKEFEQVVKVKSEQEWHN DQDFFSTEDLIKSVEEQLDLHNDQEFVNSEDLMKSTEEQLEWHNVQEFIASYEDLVKS AEKQSKLQNVQEFANTGDLTKATPLTFVIKSEDPLDLNNDYEEMSLQDGHHQLADEEM AHMASSKENTSLRQDDAYNDDYSSNNEIPSSSLDQTNLCSSEEFDELVALWRTSLRCE ICHQLVASYSQLEEHFKKQHASVVCYLMCCQMKLEYRYDIEQHIHYHNAPKHLRCETC CKSYRFVEYLRNHIRKVHTREGNDKNAKDSETLEGNYHCDKCPKTFAKNSNLRKHSIV HKPTTLECNICGKSFSSKSVMREHLARHMGEKKHGCSFCPKAFTRRSYIGRHMRASHP QEWKKMQNEAERVEKALPPFKDNQMILDSLKLSEIMFMYTCPVCCRLYETKRLLHFHI RRMHQNRPANINLQALNSFCSLNKFLLFNYLIERTSKGAFRCKVCFKECESTNSLSNH ITSEHPKIAKLEQESMATTEDHGDEEEDIENIQLEDHIIRMDSFKRYLTVIYKCKLCP KLYEEKRTMFAHLRRTHKQSFCHDSIITRFQTEGKETEVASRTKFRCDLCSTEYENRS SILSHVRKIHKRTTQKLDEATDPTYTKLLARLNVATVEIAPKTSERKVTPMPPNALYK CPFCPKQYKTNSSLNVHTRRNHKNKTQLQYRNLYEPSLNGGFRCKICSKLFKKKYSLY GHIWRLHPHKFKKGPQVVEETPATTNTTSVLYRCKFCTKTFDKIFFLNIHLRRTHNKG SKHESLFIKYLVGSENPPRIQYKCKLCFKEYDNRYSIYSHVRMIHNQDTLYNKIVVTK TTDETNTGADNVALNKEEETVDSLMSPVEGKESKDANATSSGVKIEEFSPESYTLGNE KMEVNEMPPEFEDVTWETEEFIKSENEFIDL" misc_feature 1065..1118 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1140..1205 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1266..1328 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1281..1283,1287..1289,1293..1295,1299..1304, 1311..1316,1323..1325,1362..1364,1368..1370,1380..1385, 1392..1397,1404..1406,1446..1448,1452..1454,1458..1460, 1464..1469,1476..1481) /gene="LOC106084568" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1347..1409 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1431..1487 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2370..2435 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(2385..2387,2391..2393,2397..2399,2403..2408, 2415..2420,2430..2432,2514..2516,2520..2522,2532..2537, 2544..2549,2559..2561,2658..2660,2664..2666,2670..2672, 2676..2681,2688..2693,2703..2705) /gene="LOC106084568" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 2499..2564 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2643..2708 /gene="LOC106084568" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 aaaacaacaa ctatttctaa aaccactttg acgtttgcat ttacggcatt cgccaaaccg 61 aagtagtttc ttgggagaag tttctgaaac tcaaacaact tactactata caaactacaa 121 gctaagaact tatctctaaa gcgaaaaaca tgttgaaaca tcctcctccc tcaggccatt 181 gccggctctg tgtaaaaaac tgtaatgatc accatcgcag cctctatgat gagacaggtc 241 aagctaatgc gaaccatgat cttgtaggca aatattttac taacgcaatg ttgaatatgg 301 aatgggaggg acaccttcat tatgtctgcg ggaaatgttg gcagtatatc tgggagttcc 361 atcaattcca gcaatcggtt attgaggcgc agaaagtagc gacaaaagaa tttgaacaag 421 ttgttaaggt gaaatctgaa caggagtggc ataatgacca ggattttttt agtactgagg 481 atttaataaa atctgtggaa gaacaattgg atttgcataa tgaccaggaa tttgttaact 541 ctgaagattt aatgaaatct acggaagaac aactcgaatg gcataatgtc caggaattta 601 tcgctagtta tgaagattta gtgaaatctg cagaaaaaca atcgaagctg caaaatgtcc 661 aggaatttgc taacactgga gatttaacga aagctacccc acttaccttt gttataaaat 721 ctgaagatcc tttggacctc aacaatgatt atgaagagat gtcgcttcag gatggccacc 781 accagttagc ggatgaagaa atggctcata tggccagtag caaagaaaat acatccttga 841 ggcaagacga tgcatacaat gacgattata gttcgaataa tgaaattccc tcatcatctt 901 tggatcaaac caacctttgc tcttcagagg aatttgacga gttggtagct ttatggcgaa 961 cctccttaag gtgtgaaatt tgccatcagc tagtggccag ctattctcag ttggaggaac 1021 attttaaaaa acaacatgcc tcagtggttt gttatctcat gtgttgccaa atgaaactgg 1081 aatatcgtta cgatattgag caacacatac actatcataa tgccccgaag catctccgat 1141 gtgagacctg ttgcaaatct taccgttttg tggaatattt gagaaatcac ataagaaagg 1201 tccacacccg cgagggaaat gataaaaatg ctaaagacag cgaaacgctg gaagggaatt 1261 atcattgcga caagtgtccg aagacctttg caaagaatag caatttgaga aaacacagta 1321 ttgtccataa acccacgact cttgaatgta acatttgtgg aaaatccttt agcagtaaga 1381 gtgtaatgcg cgagcatttg gctagacaca tgggcgaaaa gaaacatggc tgctcgtttt 1441 gtcccaaggc atttaccagg cgatcttata ttggtcgaca catgagagca tctcatcccc 1501 aggaatggaa gaagatgcaa aacgaggcgg aacgagttga aaaggctttg ccacctttta 1561 aagataatca aatgatcctg gattcgttga agctctcgga aatcatgttc atgtacacat 1621 gtccagtttg ctgcaggtta tacgagacga aacggctcct tcacttccac ataagacgca 1681 tgcaccaaaa taggcccgca aacatcaact tgcaagctct aaacagtttt tgctctttaa 1741 ataagttttt gctctttaac tatttaattg agcgcacttc caagggagca ttccgatgca 1801 aagtatgttt caaggaatgc gaaagcacaa attccctatc caaccacatt accagtgagc 1861 atcccaaaat agcaaaactc gagcaagaat caatggcgac aacagaggac catggcgacg 1921 aagaagaaga catagaaaac attcaactgg aagatcatat catacgcatg gattctttta 1981 aacgctacct caccgtcata tataaatgca aattatgtcc taaattatat gaggaaaagc 2041 gaactatgtt tgcccatttg cggcgcacac acaagcaaag tttctgccat gattccatta 2101 taaccagatt tcaaacggaa gggaaggaga ctgaagttgc ctcccgcacc aaatttagat 2161 gtgatctttg ttccacggaa tatgaaaatc gaagctccat actttcccat gtcaggaaga 2221 ttcacaagcg aacaactcaa aaattagatg aggctactga tccaacttat acaaaactat 2281 tagcgcgttt gaatgtggct accgtagaaa ttgcacccaa gacaagtgaa aggaaagtaa 2341 caccaatgcc gccaaatgct ttatacaaat gcccattttg tcctaagcaa tataaaacga 2401 atagctcgct taatgttcac acaagacgca atcacaaaaa taaaacgcaa ctacagtatc 2461 ggaacttata tgagccctcc cttaatggtg gattccgatg caaaatatgt tccaagctct 2521 ttaaaaagaa atattcacta tacggccaca tttggcgtct gcatccccac aagttcaaaa 2581 agggcccaca agtggtagag gaaacccctg ccaccaccaa caccaccagt gtattgtata 2641 gatgcaaatt ttgtactaaa acctttgaca agatcttctt cttgaatatc catttgcggc 2701 ggactcacaa taaaggttca aaacatgaat ccttgttcat caaatatctg gtgggttctg 2761 aaaatccccc ccgtatccag tataaatgta aactttgttt caaggagtat gacaatcgtt 2821 actccatcta cagtcatgtc agaatgattc ataatcaaga cacactctac aacaagattg 2881 tagtgacgaa gacaactgat gaaaccaaca caggggcaga taatgttgct ttaaataaag 2941 aagaagaaac ggtggattca ttgatgtccc ctgtggaggg taaagagtcg aaagatgcaa 3001 atgcaacaag ctctggtgtg aagatagaag aattttcgcc tgagtcatat accttgggaa 3061 atgagaaaat ggaagttaat gaaatgccac cagaatttga agatgttaca tgggaaactg 3121 aagaattcat aaaatccgaa aacgaattta ttgacctata agcagagaga cctcaaccca 3181 tagttggagt attgagaaaa caaaacaacc aaaaatttca tagttttaat aagcgcaaaa 3241 cctttgcaaa tgacttttgt tagtttgaga tattcagata tatgttctct cactatagcg 3301 tcagatgatt ttgtgtttaa gccagagaaa ttctgaaatg atatatgaaa tttcatcaaa 3361 ttgcacaata ggatcgatgg gttgattttg atgggtttca tttttatacc cgccatgata 3421 ggatagggag tatattcttt tgtcattctg tttgcaacac atcgaaatat ccattctaag 3481 atgatttaac catgtccgtg tgtctgtcct tctgaccgta acgctacagt ctttaaaaag 3541 tgagatattc agttgaaaaa aaatcctacc tacgcccctt ccctgtaaca gcatttgcaa 3601 aatcaagttg gttttttgaa ttttttggat atcaataatg cgattttaaa gcaatactct 3661 aagggtactt ttattaccct ttgcctttgg gaaggctact tttattaccc tttgcctttg 3721 ggaaggctac ttttattacc ctttccctat ggaagggtac ttttattacc tttcccctag 3781 gggaaggtta cttttattac cctttccctt ggggaacggt acttttatta ccctttccct 3841 tgtggaaggg tacttttatt accctttccc ttggccccga catcggacct ggtcttagac 3901 ctaaaacagc gcattcatta cccttttcgc tgaaatttgc tgtatcagga atcccgacat 3961 ctgtcttgaa taaggtccag atcaggctat atttagatat agctcccata tagaccgatc 4021 ttcagcttta agttctaaag accataaaag gcgtatttat tatctgattt cgctcaaatt 4081 tgtaacggtg agctgtttta aggcaaccga catctggccc agatatggtt catattggac 4141 aaattttcaa tatagctacc atatagatcg atcaaccaat ttagacctta accatatata 4201 cggcgcattt attatccgat ttgggtgaaa tttgaaattg tgagttgtat taagtttcct 4261 gaaatccgat ctgaatacag tccagatccg atcatattta gatatatctc ctatacatat 4321 agaccgatct gccgatttag ggtcttaaaa acagcatttt ttaaccgatt tcgctgaaat 4381 ttggtactgt cacttgtata aagc