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PREDICTED: Stomoxys calcitrans probable isocitrate dehydrogenase


LOCUS       XM_013249840            1754 bp    mRNA    linear   INV 02-SEP-2023
            [NAD] subunit alpha, mitochondrial (LOC106085539), transcript
            variant X2, mRNA.
ACCESSION   XM_013249840
VERSION     XM_013249840.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249840.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1754
                     /gene="LOC106085539"
                     /note="probable isocitrate dehydrogenase [NAD] subunit
                     alpha, mitochondrial; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 20 Proteins"
                     /db_xref="GeneID:106085539"
     CDS             127..1191
                     /gene="LOC106085539"
                     /codon_start=1
                     /product="probable isocitrate dehydrogenase [NAD] subunit
                     alpha, mitochondrial isoform X2"
                     /protein_id="XP_013105294.1"
                     /db_xref="GeneID:106085539"
                     /translation="MAARLIQKIVNTTPASGRAFSSGTRKVTLIPGDGIGPEISAAVQ
                     KIFTAASVPIEWEAVDVTPVRGPDGMFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRS
                     LNLALRKEFNLYANVRPCRSLEGYKTLYDNVDVVTIRENTEGEYSGIEHEIVDGVVQS
                     IKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDGLFLRCVRDMAGNFPEI
                     KFEERYLDTVCLNMVQDPNKYDVLVMPNLYGDILSDMCAGLVGGLGLTPSGNMGLNGA
                     LFESVHGTAPDIAGKDLANPTALLLSSVMMLRHMQLNSHADKIEQACFSVIKEGKYLT
                     GDLGGKAKCSEFTNEICAKL"
     misc_feature    193..1188
                     /gene="LOC106085539"
                     /note="Isocitrate/isopropylmalate dehydrogenase; Region:
                     Iso_dh; cl00445"
                     /db_xref="CDD:444908"
     polyA_site      1754
                     /gene="LOC106085539"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaccattcat tgtctgtgtt gaaccgagtg gcaacggaat ccttcggacg tgcggtgcgg
       61 ttgtgagaaa taaaaattga aaaattgcat aaacttaaat aagaagaaag aaatcaacaa
      121 aatattatgg ctgcaagatt aatccaaaag attgttaaca caactcctgc atctggtcgt
      181 gcattttctt cgggtacacg caaagttacc ctcattcctg gtgatggcat tggtccagaa
      241 atttctgctg ctgtgcagaa aatctttact gctgccagcg tgcccattga atgggaagca
      301 gtcgatgtga ctcccgttag gggtccggat ggcatgttcg gcattcctca agctgccata
      361 gattcggtta acacaaacaa gatcggttta aagggtcctc tcatgactcc cgtcggcaag
      421 ggtcatcgtt ccttgaattt ggccttgcgt aaagagttca atctgtatgc caacgtaagg
      481 ccctgcagaa gtttggaggg ttacaagact ttgtacgata acgtagatgt tgtcacaatt
      541 cgcgagaaca ctgaaggtga atactctggc attgaacatg aaattgtcga cggagttgtg
      601 caaagtatca aattgattac ggaggaggct tcaaaacgtg tggctgaata cgctttccaa
      661 tacgccaaga acaacaacag gaagaaggtt accgttgtac acaaggccaa cattatgcgt
      721 atgtcagatg gtttgttctt gcgttgtgtc cgcgacatgg ctggaaactt cccagaaatt
      781 aaatttgagg aacgttattt ggacacagtt tgcttgaata tggtacaaga tcccaacaag
      841 tatgatgttc tggtaatgcc taacttgtac ggtgatatct tgtctgatat gtgcgccggc
      901 ttagtaggtg gtctcggttt gacaccttct ggcaacatgg gtcttaacgg agccctcttc
      961 gaatccgttc acggtactgc ccccgatatt gccggcaaag atttggccaa ccccaccgcc
     1021 ttgttgttgt cttccgtcat gatgttgaga cacatgcagc tcaattctca cgccgataaa
     1081 attgaacagg cctgtttctc cgtcattaag gagggaaaat atttgactgg cgatttgggt
     1141 ggcaaagcca agtgctccga attcacaaat gaaatttgtg ctaagctgta aatgttgcac
     1201 caacatcttc gccacaaaaa ctcatttcat ttaagccaaa aaaccttgca ccgttttaaa
     1261 ataatttgaa tagaaagaag ctcttgaaaa aacaaaaacc aaccgatagt attgtacgtt
     1321 cgaataccta cttaatgcaa tttattgcaa gttttaaata ttttctaaaa tcaaaacatt
     1381 atgaatattt tcgagtagtt aaaaaccaac acatatatcc atccttgttt gtcgtattat
     1441 tattttatta gaaactttta tgtataatct tgttagtttt ttttctgtcc aaaagaaaag
     1501 tgtattgtta tttaaatatt taatccacat tttaatttat aattttattt ttcctttgtc
     1561 tattttggct tcatttattt ttaaatttcc aataaattta tttgaatgtc aacggacgca
     1621 tcattatgaa actcatatgt aacgtaacaa taaattatcg cgtataatga tataaagaac
     1681 aaacaaaaat aaaacagaat agttatcata atacacaaaa aaacttgttg aaataaaaaa
     1741 ttaaacagac atta