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PREDICTED: Stomoxys calcitrans chondroitin sulfate


LOCUS       XM_013249833            5871 bp    mRNA    linear   INV 02-SEP-2023
            glucuronyltransferase (LOC106085532), transcript variant X3, mRNA.
ACCESSION   XM_013249833
VERSION     XM_013249833.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249833.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5871
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5871
                     /gene="LOC106085532"
                     /note="chondroitin sulfate glucuronyltransferase; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:106085532"
     CDS             1592..4201
                     /gene="LOC106085532"
                     /codon_start=1
                     /product="chondroitin sulfate glucuronyltransferase"
                     /protein_id="XP_013105287.2"
                     /db_xref="GeneID:106085532"
                     /translation="MNLPLLSNSKMRRSSLSRNHYFVIGLFLGLVLSFYVPQDIWELV
                     QQEECPQEAAENSLIEKFGQEFEPHLNLINKPLAAKKTVKNVIRPRYYSSELGIREKI
                     FIGVMTTQDNINTLATAINRTTAHLVNKIKFFINADNVKSNYKLKNIVGFTDTRENLR
                     PFHVIKYIADNYLDDYDYFLIIQDNVYVDARKLNAMLYHMSITFDLYMGAKTEASNYG
                     SYGANDQLPQQQRFMAAVAGENGAEPADGVAAGSNDEFRMLSDRNYCDLNAGILLSSS
                     VIRKMRNNLDWCVRNGITNVHSINIGRCVKYSSNLPGCQEVFQGIRQRTYDLKSSVKL
                     FKDLNLLTKDETFRNATTIYPVTTTDDFYRLHAYFSKYHLEIVQQNSAELELKSYRIA
                     NGSISNNILEIRWPLGVPLASAPETRHDIIMWHYLNRTHIFLPNAENNVEPLADIEAK
                     DLEKILDITTQYAKHKFPNMQYEGIHSIYRRFDATRGMDYHVHLIMRETGRISALTQK
                     SSQIKNFQIVKPLGHVEVVPSPYVTESTRIAILVPTFEHQLQEALQFINQYEQTCMHN
                     QDNTFLLMIFMYRPDSESKGEMDPFKLIKTLALDLSSKYKTDGSRIAWVSIRLPAAFN
                     EPSPAEDVMLNSLYGRDEILSIAVADLALPKIGLDSLVLMASNSISFKPDFLNRVRMN
                     TIQGFQIYSPIGFMMYPCKLAEFCKECDTCDVSQSTGYFDKWNYDIISFYSRDYVQAR
                     KLVETSVPITRSDHDIEQLLTRADRSINHVLDMFVSSQLSVHILRGVEPNLRYGSAIR
                     NLIDRRNYDDGIKAIPKCPLDTEDAAEAENPSSTKNSRRSEEATHKCIHMASRKQIGD
                     AIIRYEDKSIIHK"
ORIGIN      
        1 acggaacagt cttcgggaac ccgggaagcc ggtatatttg ttttgtgttt taacaccgca
       61 gcaaagtgtt ctcttgttct caagtctttt aaaattcgtt ccgttgctga cattgctaat
      121 taaatttaat taaagccaca atgtttgtgt gttctcttct ctgttgatta aaggctagat
      181 ggagttggat tgcaaccacc ctagcgcagc tgaaaagaag tttcctccaa aagttcttac
      241 acgaaaacaa ccggttcctt ttaaaaagaa aaaagtcctc tgctataaca ccaacagcaa
      301 ccccgatcga tccgtataag cgacaggcga aaagatcaac caatctacct tcctaccaac
      361 cggctgtcgc acacattaat gaaatgctaa aaagaaaata atttgtgcaa gaagtttacc
      421 aacaaaaagt aaaggtgaaa acaaaaatcc aaaaagtgaa gtaaatgaaa ttatcagcag
      481 gccggctggt tggtgcctta ccaacgagca acctcaatgg ctaaagcaaa gcaataaaaa
      541 ataaaaataa tttgaagagc acgaatgaag aacctgcgat ctaccttggc ctggcgtgtg
      601 tgttttttcg tgtgcgtccg tgttttcttt tttttttgtt tattcttttt gttgtcattt
      661 gtaagcaaag agtatctgca caactgtcaa atactaagat atctagatat caatgtctgc
      721 atacagtgtc acataaccac aatcatacac acgcataccc gaatatatct gcaaacacac
      781 tacatattaa attagtggta tttttgtcat tgttatgcgg ttaaagtgct ccgctattta
      841 ttgggcctaa atttaatttt gtttccccaa ttacactatt tgttggtgga tttgttgctg
      901 tcaaagaacc gacgagcaac agagtgccaa ggctgcgcag caagtgttta gtgatgtgcc
      961 agcaaacgag caaagcaaaa acgatatgtg aaattaattg aataacaaca ataataataa
     1021 agcaacaaac aaacaacaac aaaaacgtcg acaaaaggga tccacattaa taaaaatctt
     1081 catcatcatc acaataactg ccaccatcgt cattattatc ttcttcgtca tcacaagaat
     1141 ctactaaaac tagtgccaag atcagtgtca acgtagacgt cgacgccgca gagcaaacat
     1201 aagaacgacg acgatgttca gaacgagtga caaaaaggaa tcacattaaa gtggcagcaa
     1261 tagcacatat tcaagcaaga gcaacaacac attgtcacca cataacagca gcagcagcca
     1321 acaacaacac cacaacacca gccattagaa ttgcgccaaa gaaaaattct tttgcaaaga
     1381 cagtgagtgc cgcagagcgc attgaatgga tgtgtgtgtg tttattgtgc cgcgtactgc
     1441 acttgcattt acactataaa gagtatctgt tgttgtttgg tacacacccc cactatagat
     1501 ttattatttg tgtgctccac acttgctcta tccctctccg tggaatttaa tctgaaacac
     1561 atgaatttta acattttgtt tggctgctaa catgaatctt cctctactct caaactcaaa
     1621 aatgcggcgc tcttcgttga gtcgcaatca ttattttgtc attggcctat ttttgggttt
     1681 agtcctgtca ttctatgtgc ctcaagatat ttgggaactt gtccagcagg aggaatgtcc
     1741 ccaagaggca gctgagaata gtttgatcga gaaatttggc caagaatttg aaccacatct
     1801 aaatttgatt aacaaaccac tggcagcaaa gaaaacagtt aaaaatgtga ttcggccacg
     1861 ttactattcc tccgaattgg gcatacgcga gaaaattttt ataggcgtca tgaccacgca
     1921 agacaacatt aacactttgg ccacagcgat aaatcgcact accgcccatc tggtgaataa
     1981 aatcaaattc ttcatcaacg ccgataacgt taagtcaaac tataagctta agaacatagt
     2041 gggcttcacc gatacccgag agaatctgcg accattccat gtcataaaat acattgccga
     2101 caattacctc gatgattacg attattttct aatcatccaa gacaacgtgt atgtggatgc
     2161 gcgtaaactg aacgctatgc tctatcatat gagcataacg ttcgatttgt atatgggggc
     2221 caagacggag gccagcaatt atggcagtta tggggccaat gatcagttgc cgcagcagca
     2281 acgttttatg gccgctgtgg cgggtgaaaa tggggctgag cctgctgacg gcgttgccgc
     2341 tggcagtaat gatgaatttc gcatgttaag cgatcgcaat tattgcgatt taaatgcagg
     2401 catacttttg agcagcagtg ttattcgaaa aatgcgcaac aacctggatt ggtgcgttcg
     2461 caatggcatt accaatgtgc atagcatcaa tattggacgc tgtgtaaagt attcaagtaa
     2521 tttgccagga tgtcaggaag tctttcaggg aatacgacag aggacatatg atttgaaatc
     2581 gagtgtgaaa ttatttaaag atttgaatct attaaccaaa gatgagacat tccgcaatgc
     2641 cacaacaata tatccggtca caacgacaga tgatttttat cgtcttcatg cgtacttttc
     2701 aaagtatcat ttagaaatcg ttcaacaaaa tagtgccgaa ctggagctaa aatcatatcg
     2761 cattgccaat ggtagcattt caaataatat actggaaata cgatggcctc tgggtgttcc
     2821 cttggccagt gctcccgaaa cacgacacga tattatcatg tggcattacc tcaatcgcac
     2881 tcatatcttt ttgccaaatg ccgaaaataa tgttgagccc ctggccgata tcgaagccaa
     2941 agatcttgaa aaaattctgg atataacgac acaatatgcc aagcacaaat ttcccaacat
     3001 gcaatatgag ggcatacaca gtatctatcg caggtttgat gccacgcgag gcatggacta
     3061 tcatgtacat ttgattatgc gcgaaacggg aagaatatca gcgctaacac agaaatcgtc
     3121 acaaattaaa aactttcaaa ttgttaagcc tctgggccac gttgaagtgg tgccatcgcc
     3181 ctatgttaca gaaagtacga gaatagcaat tttagtgccc acattcgagc accagttgca
     3241 agaggccttg caattcataa atcagtatga gcaaacatgc atgcacaatc aggataacac
     3301 atttttatta atgattttta tgtatcgccc cgattcagaa agtaaaggtg aaatggatcc
     3361 cttcaaactt atcaaaactc tcgccttgga tttatcttcg aaatataaaa cggatggatc
     3421 gcgcatagct tgggtctcca taaggctgcc tgcagcgttc aatgagcctt caccggccga
     3481 agatgttatg ctgaattctt tgtatggtcg agacgaaatt ctgagcatag cagtagctga
     3541 tcttgcctta ccaaaaattg gtcttgatag tttagtttta atggcttcca attccatttc
     3601 attcaagccg gacttcctaa atcgggttcg tatgaacact attcaaggct ttcaaatata
     3661 ctctccgatt ggcttcatga tgtacccttg caaattggct gagttttgca aggaatgtga
     3721 tacctgcgat gtaagtcaaa gtactggata ttttgacaaa tggaactatg atattatatc
     3781 attttatagt cgagactatg tgcaagcgcg caaactagtc gaaacatctg taccaatcac
     3841 acgatcagat catgatatcg aacaattgtt aacacgtgct gaccgaagca ttaaccatgt
     3901 gctggacatg tttgtctcat cccagctgtc agtgcatata ttgcggggag ttgaaccaaa
     3961 tctacgttat ggcagtgcca ttcgaaattt aatcgacaga cgaaattatg atgatggcat
     4021 taaagccata ccaaaatgtc cacttgacac tgaagatgcg gcggaagctg aaaatccctc
     4081 cagcacaaag aatagtcgaa ggagtgaaga agcaacgcat aaatgtatcc acatggcttc
     4141 gaggaagcaa attggcgatg ccattatacg atatgaggat aaaagtatta tacacaaatg
     4201 atcacatcgg cacagatagt gagagcgaga gagagagaga gtcaaaggac attcgttata
     4261 tgctaaatat aattatgctt ctctacggat atgccgatga gtgtataccg catcaagtct
     4321 atgaatcagt caagtatttc cattttagtg tgtagatagg acaattagtt ttgatattca
     4381 catatatgta catgtaccta catacatatc taaacaaaag aaactacata aacatacata
     4441 tttatttgtt gtcatattgt tttgtacata aaaagaaata gatttaatat aattatgaca
     4501 aatactataa gaggtctgtg tgtgtgtgtg tgacaacaat gatgcagaag taatattgaa
     4561 agttataatt ttgcaaatat gatgtttttt tttgttttta agtgaaaatg tgatttcaaa
     4621 aatatatccc cattagtgaa gaattaagat aaacttgttt cgatttttaa ttatagctta
     4681 atccctcctt gttaagttga ttttgtcaca tgcatacatt cgagtgttgt ttttatatag
     4741 aacatgtatt tttaaaattg atacgtaaac caacgacgat ttcaaatgct caaattattt
     4801 tttatattct tatatgtgaa attgtatgat attttattct taaattttta tgagttactt
     4861 acatgcatac aaatgtagca gtgtgtatgt gtaggtatag ttatcgttat gttatttgcc
     4921 aaaatcttgc ttatgtctat tggataagga taataatgtg ttatacctat ttataataat
     4981 gcaaataatt cctatagttt ttagttttga gaacctattt tataagtctt tgcctttttc
     5041 acggaaaagt tgtttttgta attattttgc ctcaattgaa aagtttcaaa acaatatgga
     5101 ataccatttc ccttcattta tatcaaaatg gaataagaaa atttaagact tgaaattatt
     5161 tttcaacttg ttattgatta tattcagccc aagcaagact tacaaaatag gtggggatgc
     5221 aaatgtaacc taagtctatt ttagattaac tgtgctccac aagacctatg gtaagtcctg
     5281 tgtttctcta ccacttgtgt aatgtaatat cagttattcc atgctcttta ataatgcttt
     5341 taatttattg tgaatttatt tgttagcaaa atttcctttt aagtttcctg ttttaattta
     5401 tacatatgac atatgactgc cttagatgtt actacctctc tattatcaag tttattttcg
     5461 gttaaagaaa aacaacataa acacttagaa gatcagatcg cgaattaatc atagagtaat
     5521 aagtatgtat gtattaaagt ctgccaaagg tttactacga gtactgtttg ttgaatgaat
     5581 ccttcaccac ttcgagttga tgaacgagtt atatgcccat tctctttctg ttacatatat
     5641 gtacataaat atgtaaacat actaatgaga tacgatattt atatgcccgt caaaataata
     5701 ctatctatgt gctctcctac gtttctacta tgtcattttt attttatttt taaaatttgt
     5761 aaaagtgggt attgttaatt atattaatta caattgtaca tacatgctat ttaaatagaa
     5821 agagaaaatt gtgtacacat ttactattgt taatttatat acatatataa t