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PREDICTED: Stomoxys calcitrans chondroitin sulfate


LOCUS       XM_013249832            5742 bp    mRNA    linear   INV 02-SEP-2023
            glucuronyltransferase (LOC106085532), transcript variant X2, mRNA.
ACCESSION   XM_013249832
VERSION     XM_013249832.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249832.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5742
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5742
                     /gene="LOC106085532"
                     /note="chondroitin sulfate glucuronyltransferase; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:106085532"
     CDS             1463..4072
                     /gene="LOC106085532"
                     /codon_start=1
                     /product="chondroitin sulfate glucuronyltransferase"
                     /protein_id="XP_013105286.2"
                     /db_xref="GeneID:106085532"
                     /translation="MNLPLLSNSKMRRSSLSRNHYFVIGLFLGLVLSFYVPQDIWELV
                     QQEECPQEAAENSLIEKFGQEFEPHLNLINKPLAAKKTVKNVIRPRYYSSELGIREKI
                     FIGVMTTQDNINTLATAINRTTAHLVNKIKFFINADNVKSNYKLKNIVGFTDTRENLR
                     PFHVIKYIADNYLDDYDYFLIIQDNVYVDARKLNAMLYHMSITFDLYMGAKTEASNYG
                     SYGANDQLPQQQRFMAAVAGENGAEPADGVAAGSNDEFRMLSDRNYCDLNAGILLSSS
                     VIRKMRNNLDWCVRNGITNVHSINIGRCVKYSSNLPGCQEVFQGIRQRTYDLKSSVKL
                     FKDLNLLTKDETFRNATTIYPVTTTDDFYRLHAYFSKYHLEIVQQNSAELELKSYRIA
                     NGSISNNILEIRWPLGVPLASAPETRHDIIMWHYLNRTHIFLPNAENNVEPLADIEAK
                     DLEKILDITTQYAKHKFPNMQYEGIHSIYRRFDATRGMDYHVHLIMRETGRISALTQK
                     SSQIKNFQIVKPLGHVEVVPSPYVTESTRIAILVPTFEHQLQEALQFINQYEQTCMHN
                     QDNTFLLMIFMYRPDSESKGEMDPFKLIKTLALDLSSKYKTDGSRIAWVSIRLPAAFN
                     EPSPAEDVMLNSLYGRDEILSIAVADLALPKIGLDSLVLMASNSISFKPDFLNRVRMN
                     TIQGFQIYSPIGFMMYPCKLAEFCKECDTCDVSQSTGYFDKWNYDIISFYSRDYVQAR
                     KLVETSVPITRSDHDIEQLLTRADRSINHVLDMFVSSQLSVHILRGVEPNLRYGSAIR
                     NLIDRRNYDDGIKAIPKCPLDTEDAAEAENPSSTKNSRRSEEATHKCIHMASRKQIGD
                     AIIRYEDKSIIHK"
ORIGIN      
        1 acggaacagt cttcgggaac ccgggaagcc ggtatatttg ttttgtgttt taacaccgca
       61 gcaaagtgtt ctcttgttct caagtctttt aaaattcgtt ccgttgctga cattgctaat
      121 taaatttaat taaagccaca atgtttgtgt gttctcttct ctgttgatta aaggctagat
      181 ggagttggat tgcaaccacc ctagcgcagc tgaaaagaag tttcctccaa aagttcttac
      241 acgaaaacaa ccggttcctt ttaaaaagaa aaaagtcctc tgctataaca ccaacagcaa
      301 ccccgatcga tccgtataag cgacaggcga aaagatcaac caatctacct tcctaccaac
      361 cggctgtcgc acacattaat gaaatgctaa aaagaaaata atttgtgcaa gaagtttacc
      421 aacaaaaagt aaaggtaaaa tggccagaat gaattgtttg tgataaatat acaaccgaaa
      481 tactgaaata agtgtaaatt attaaatttg ttgtttcgtt tttattggtg caacagcaaa
      541 gagtatctgc acaactgtca aatactaaga tatctagata tcaatgtctg catacagtgt
      601 cacataacca caatcataca cacgcatacc cgaatatatc tgcaaacaca ctacatatta
      661 aattagtggt atttttgtca ttgttatgcg gttaaagtgc tccgctattt attgggccta
      721 aatttaattt tgtttcccca attacactat ttgttggtgg atttgttgct gtcaaagaac
      781 cgacgagcaa cagagtgcca aggctgcgca gcaagtgttt agtgatgtgc cagcaaacga
      841 gcaaagcaaa aacgatatgt gaaattaatt gaataacaac aataataata aagcaacaaa
      901 caaacaacaa caaaaacgtc gacaaaaggg atccacatta ataaaaatct tcatcatcat
      961 cacaataact gccaccatcg tcattattat cttcttcgtc atcacaagaa tctactaaaa
     1021 ctagtgccaa gatcagtgtc aacgtagacg tcgacgccgc agagcaaaca taagaacgac
     1081 gacgatgttc agaacgagtg acaaaaagga atcacattaa agtggcagca atagcacata
     1141 ttcaagcaag agcaacaaca cattgtcacc acataacagc agcagcagcc aacaacaaca
     1201 ccacaacacc agccattaga attgcgccaa agaaaaattc ttttgcaaag acagtgagtg
     1261 ccgcagagcg cattgaatgg atgtgtgtgt gtttattgtg ccgcgtactg cacttgcatt
     1321 tacactataa agagtatctg ttgttgtttg gtacacaccc ccactataga tttattattt
     1381 gtgtgctcca cacttgctct atccctctcc gtggaattta atctgaaaca catgaatttt
     1441 aacattttgt ttggctgcta acatgaatct tcctctactc tcaaactcaa aaatgcggcg
     1501 ctcttcgttg agtcgcaatc attattttgt cattggccta tttttgggtt tagtcctgtc
     1561 attctatgtg cctcaagata tttgggaact tgtccagcag gaggaatgtc cccaagaggc
     1621 agctgagaat agtttgatcg agaaatttgg ccaagaattt gaaccacatc taaatttgat
     1681 taacaaacca ctggcagcaa agaaaacagt taaaaatgtg attcggccac gttactattc
     1741 ctccgaattg ggcatacgcg agaaaatttt tataggcgtc atgaccacgc aagacaacat
     1801 taacactttg gccacagcga taaatcgcac taccgcccat ctggtgaata aaatcaaatt
     1861 cttcatcaac gccgataacg ttaagtcaaa ctataagctt aagaacatag tgggcttcac
     1921 cgatacccga gagaatctgc gaccattcca tgtcataaaa tacattgccg acaattacct
     1981 cgatgattac gattattttc taatcatcca agacaacgtg tatgtggatg cgcgtaaact
     2041 gaacgctatg ctctatcata tgagcataac gttcgatttg tatatggggg ccaagacgga
     2101 ggccagcaat tatggcagtt atggggccaa tgatcagttg ccgcagcagc aacgttttat
     2161 ggccgctgtg gcgggtgaaa atggggctga gcctgctgac ggcgttgccg ctggcagtaa
     2221 tgatgaattt cgcatgttaa gcgatcgcaa ttattgcgat ttaaatgcag gcatactttt
     2281 gagcagcagt gttattcgaa aaatgcgcaa caacctggat tggtgcgttc gcaatggcat
     2341 taccaatgtg catagcatca atattggacg ctgtgtaaag tattcaagta atttgccagg
     2401 atgtcaggaa gtctttcagg gaatacgaca gaggacatat gatttgaaat cgagtgtgaa
     2461 attatttaaa gatttgaatc tattaaccaa agatgagaca ttccgcaatg ccacaacaat
     2521 atatccggtc acaacgacag atgattttta tcgtcttcat gcgtactttt caaagtatca
     2581 tttagaaatc gttcaacaaa atagtgccga actggagcta aaatcatatc gcattgccaa
     2641 tggtagcatt tcaaataata tactggaaat acgatggcct ctgggtgttc ccttggccag
     2701 tgctcccgaa acacgacacg atattatcat gtggcattac ctcaatcgca ctcatatctt
     2761 tttgccaaat gccgaaaata atgttgagcc cctggccgat atcgaagcca aagatcttga
     2821 aaaaattctg gatataacga cacaatatgc caagcacaaa tttcccaaca tgcaatatga
     2881 gggcatacac agtatctatc gcaggtttga tgccacgcga ggcatggact atcatgtaca
     2941 tttgattatg cgcgaaacgg gaagaatatc agcgctaaca cagaaatcgt cacaaattaa
     3001 aaactttcaa attgttaagc ctctgggcca cgttgaagtg gtgccatcgc cctatgttac
     3061 agaaagtacg agaatagcaa ttttagtgcc cacattcgag caccagttgc aagaggcctt
     3121 gcaattcata aatcagtatg agcaaacatg catgcacaat caggataaca catttttatt
     3181 aatgattttt atgtatcgcc ccgattcaga aagtaaaggt gaaatggatc ccttcaaact
     3241 tatcaaaact ctcgccttgg atttatcttc gaaatataaa acggatggat cgcgcatagc
     3301 ttgggtctcc ataaggctgc ctgcagcgtt caatgagcct tcaccggccg aagatgttat
     3361 gctgaattct ttgtatggtc gagacgaaat tctgagcata gcagtagctg atcttgcctt
     3421 accaaaaatt ggtcttgata gtttagtttt aatggcttcc aattccattt cattcaagcc
     3481 ggacttccta aatcgggttc gtatgaacac tattcaaggc tttcaaatat actctccgat
     3541 tggcttcatg atgtaccctt gcaaattggc tgagttttgc aaggaatgtg atacctgcga
     3601 tgtaagtcaa agtactggat attttgacaa atggaactat gatattatat cattttatag
     3661 tcgagactat gtgcaagcgc gcaaactagt cgaaacatct gtaccaatca cacgatcaga
     3721 tcatgatatc gaacaattgt taacacgtgc tgaccgaagc attaaccatg tgctggacat
     3781 gtttgtctca tcccagctgt cagtgcatat attgcgggga gttgaaccaa atctacgtta
     3841 tggcagtgcc attcgaaatt taatcgacag acgaaattat gatgatggca ttaaagccat
     3901 accaaaatgt ccacttgaca ctgaagatgc ggcggaagct gaaaatccct ccagcacaaa
     3961 gaatagtcga aggagtgaag aagcaacgca taaatgtatc cacatggctt cgaggaagca
     4021 aattggcgat gccattatac gatatgagga taaaagtatt atacacaaat gatcacatcg
     4081 gcacagatag tgagagcgag agagagagag agtcaaagga cattcgttat atgctaaata
     4141 taattatgct tctctacgga tatgccgatg agtgtatacc gcatcaagtc tatgaatcag
     4201 tcaagtattt ccattttagt gtgtagatag gacaattagt tttgatattc acatatatgt
     4261 acatgtacct acatacatat ctaaacaaaa gaaactacat aaacatacat atttatttgt
     4321 tgtcatattg ttttgtacat aaaaagaaat agatttaata taattatgac aaatactata
     4381 agaggtctgt gtgtgtgtgt gtgacaacaa tgatgcagaa gtaatattga aagttataat
     4441 tttgcaaata tgatgttttt ttttgttttt aagtgaaaat gtgatttcaa aaatatatcc
     4501 ccattagtga agaattaaga taaacttgtt tcgattttta attatagctt aatccctcct
     4561 tgttaagttg attttgtcac atgcatacat tcgagtgttg tttttatata gaacatgtat
     4621 ttttaaaatt gatacgtaaa ccaacgacga tttcaaatgc tcaaattatt ttttatattc
     4681 ttatatgtga aattgtatga tattttattc ttaaattttt atgagttact tacatgcata
     4741 caaatgtagc agtgtgtatg tgtaggtata gttatcgtta tgttatttgc caaaatcttg
     4801 cttatgtcta ttggataagg ataataatgt gttataccta tttataataa tgcaaataat
     4861 tcctatagtt tttagttttg agaacctatt ttataagtct ttgccttttt cacggaaaag
     4921 ttgtttttgt aattattttg cctcaattga aaagtttcaa aacaatatgg aataccattt
     4981 cccttcattt atatcaaaat ggaataagaa aatttaagac ttgaaattat ttttcaactt
     5041 gttattgatt atattcagcc caagcaagac ttacaaaata ggtggggatg caaatgtaac
     5101 ctaagtctat tttagattaa ctgtgctcca caagacctat ggtaagtcct gtgtttctct
     5161 accacttgtg taatgtaata tcagttattc catgctcttt aataatgctt ttaatttatt
     5221 gtgaatttat ttgttagcaa aatttccttt taagtttcct gttttaattt atacatatga
     5281 catatgactg ccttagatgt tactacctct ctattatcaa gtttattttc ggttaaagaa
     5341 aaacaacata aacacttaga agatcagatc gcgaattaat catagagtaa taagtatgta
     5401 tgtattaaag tctgccaaag gtttactacg agtactgttt gttgaatgaa tccttcacca
     5461 cttcgagttg atgaacgagt tatatgccca ttctctttct gttacatata tgtacataaa
     5521 tatgtaaaca tactaatgag atacgatatt tatatgcccg tcaaaataat actatctatg
     5581 tgctctccta cgtttctact atgtcatttt tattttattt ttaaaatttg taaaagtggg
     5641 tattgttaat tatattaatt acaattgtac atacatgcta tttaaataga aagagaaaat
     5701 tgtgtacaca tttactattg ttaatttata tacatatata at