Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans uncharacterized LOC106085492


LOCUS       XM_013249782            1738 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106085492), transcript variant X4, mRNA.
ACCESSION   XM_013249782
VERSION     XM_013249782.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249782.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1738
                     /gene="LOC106085492"
                     /note="uncharacterized LOC106085492; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:106085492"
     CDS             517..1515
                     /gene="LOC106085492"
                     /codon_start=1
                     /product="uncharacterized protein LOC106085492"
                     /protein_id="XP_013105236.2"
                     /db_xref="GeneID:106085492"
                     /translation="MEPMTALVLAFQLLALFSIAGALIIYLICKVRDDDVKKAEHPKS
                     NTVLVTSADTALGLQLCTHLASKGCRVVAGMKDGVDSLPAKLLVGWLKMREFTEAPVS
                     GTIIPMFLDVTKDDVLREATETIGSHLSAGEQGIAAVINTSGTFYRGRIESQELYQME
                     QMFKTNILGSLRIAKAFVDFLRPTCGRLIYLGAASGGHGDGLIAYNVSRVATDKCVQE
                     VRRELQPFGVSVVCLDTCGLHAETLYKPPTAQISSGAPTTYTANVLCPSALSVVERAL
                     WDQSPHERYSLLASNKYQFALPCRSSLRSLSNKSNSDNNVNKKPLENQSIGGVQRV"
     polyA_site      1738
                     /gene="LOC106085492"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taagagagag atagtcttcg tttgttaagc tacgcacgaa caacacgttt ttcttttttc
       61 tttcggaggt atctgaagtt tgagttacac tgctgcttgt ggttgattgc aacttgtcaa
      121 tgtaacaacg cagaactttg gtcgcattcg cgcgcataca tctcaccggg cggtgttcaa
      181 tatcggatcg atcggttaaa taacaacaaa aaaaaaaaaa taaagcaagc aaaagaaaca
      241 gagtgtttat ttaagaagaa aacagcagaa aactaatctt aaaaagaaga aaaaaactga
      301 agttttttga ctagccattg tcattttgga gcgttttttg taattccggt ttttcgactt
      361 ttttcaactt cattgacaac gaagacattt tgtttacaac gaaaggatta tttgttggcg
      421 cttatttatt gtcagcttag aaaattgcct taataatttt tggattaaca acgaaaaaat
      481 tcatataagg ctgattgttt aaaaagcaat gccataatgg aacccatgac agctctagta
      541 ttggcctttc aactattggc cctattctcc attgctggtg cccttattat ctatttgatt
      601 tgtaaagttc gcgatgacga tgtcaaaaag gccgaacatc ctaaatccaa taccgttttg
      661 gtcaccagtg ccgataccgc tttaggcttg caattgtgca cccatttggc tagcaagggt
      721 tgtcgggtag tggccggcat gaaagatggt gtagatagct tgcctgccaa acttcttgtt
      781 ggatggttga aaatgcgtga gtttaccgag gcccctgtat cgggtaccat aatacccatg
      841 ttcttggatg ttaccaagga tgatgttctg cgtgaggcta ctgaaactat aggctcgcat
      901 ttaagtgctg gcgaacaagg catagcggct gtcatcaaca ccagtggcac tttctatcgg
      961 ggacgcattg aaagccagga actctatcaa atggaacaga tgtttaagac aaatattttg
     1021 ggatctttgc gtatagccaa ggcttttgtt gatttcctga gacccacttg tggccgtttg
     1081 atttacttgg gtgctgccag cggaggtcat ggcgatggtt tgatcgctta caatgtatcg
     1141 cgtgtggcca cagataaatg tgtacaagaa gtacgtcgtg aattgcaacc gtttggcgta
     1201 agtgtggtct gtttggatac ttgtggtttg catgccgaga cgctctataa accaccaact
     1261 gcacaaattt ccagcggtgc cccgacaacc tacacggcca atgttttatg tcccagtgct
     1321 ttgagtgtgg tggagagagc tttgtgggat caatcacctc atgagcgtta ctcgttattg
     1381 gcctccaaca aatatcaatt cgcgttgcca tgccgttctt cattgcgttc attgtccaac
     1441 aagagcaact ccgacaacaa cgtcaataag aagcctttgg aaaatcaatc aatcggtggt
     1501 gtacaacgcg tctgaacgac caatcaacca acgaaacaga gaatgtggaa atttctgttt
     1561 gcatctgcaa taacaaggaa ttgattgaat ttcttttatg ttttttcaaa gatagacaaa
     1621 caactattca aaaaaatgca caaaaggatt ttgttaccag aaaaacttag ttgtaatgag
     1681 aggtagcgaa agcgttggcg tttaagcttg cgatttcgat gcaaaagcaa acaaattc