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LOCUS XM_013249773 8685 bp mRNA linear INV 02-SEP-2023 alpha-1,2-mannosidase IA (LOC106085499), transcript variant X4, mRNA. ACCESSION XM_013249773 VERSION XM_013249773.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249773.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8685 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8685 /gene="LOC106085499" /note="mannosyl-oligosaccharide alpha-1,2-mannosidase IA; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:106085499" CDS 349..2589 /gene="LOC106085499" /codon_start=1 /product="mannosyl-oligosaccharide alpha-1,2-mannosidase IA isoform X2" /protein_id="XP_013105227.2" /db_xref="GeneID:106085499" /translation="MCPKNSKTPIFLIGGICFVIVLVAICGVTLINNINLSNIIRLNE KVASDSMATSNQQHQQYDDGDGGGDGDDDDEADAAGGESVNDYLAGLESERRLSQYTQ SHPKNIFRFDKETGMMTEHHQQHNSNEEANRQHNSPEPPRNEMSAYGSWSPLGLWPNA RIVDNDRNIDTLQVQEINAISMDTNDSVEKFSSKTVAAGGLATSTATSGSALRPAPTA HTAAASTRISLDNHESFNRIAAPSMEAMATIATTIATSTTTVSPVLVISDKNVSMIDY EKRSHVVKMMQHAWQNYKLYAWGKNELRPLSQRAHIGSIFGSQELGATIIDGLDTLYI MGLENEYKEGRDWIERKFSLDNVTADLSVFETNIRFIGGLLTMYAFTGDNLYKERAQH VADKLLPAFQTPTGIPYGLVNPKTGLSKNYGWASGASSILSEFGTLHLEFSYLSDITG NPLYKERVQTIRQILKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSFYEYLLKAW LQSGQTDEEARQMFDEAMVAIIDHMVRTSLNGLTYVSDLKFDRLEHKMDHLACFAGGL FALGANTRQNEHTEKFMSIGKGITNTCHESYIRSTTHLGPEAFRFSEAAEARALKSNE KYYILRPETVESYLVLWRLTHDQKYRDWGWDAVQALEQHCRTPHGYSGIKNVYQDAPQ KDDVQQSFFLAETLKYLYLLFSDDSLIPLDEWVFNTEAHPLPIKGSNIYYRQAASTSA AATNAS" polyA_site 8685 /gene="LOC106085499" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgtttattt tgtttcgttc gttcgttagt tcttgaccca aacagaggca caagtgttct 61 tctgtctcgc cgttcgccat taaagctttt gtccagtgat tttctatgaa atacaaagaa 121 taaggtcgtg aataatagca actattcaaa aggtctttcc atttgtagaa atgcttagaa 181 caatttaata tcaagtgaat ataattgttt cccgaaattc aaaatcagca gagtgatgat 241 tctttaatta aaacgctgac aatcccaaaa aaaaaaaata taaacatact aagcaacgct 301 tttactttaa tttgcattca caacaatagt acgttgaaat atttaaaaat gtgtcccaaa 361 aattcaaaaa cacccatttt cttaattggt ggtatttgtt tcgttatcgt tttggtggcc 421 atatgcggcg ttacactcat caataacatc aatttatcca atattattcg attaaatgaa 481 aaagttgcca gtgatagcat ggccaccagc aatcaacagc atcagcaata cgatgacggt 541 gacggaggag gtgatggcga tgatgacgat gaggctgatg ccgctggcgg agagagtgtg 601 aacgactacc ttgctgggct ggagagcgaa cgccgtttgt cccagtatac ccaaagccac 661 ccgaaaaata tttttcgctt cgacaaagaa actggcatga tgacggaaca tcaccagcaa 721 cacaacagca acgaagaagc caatcggcag cacaattcac cggaacctcc acgtaatgaa 781 atgtcagcat acggttcgtg gtcgccactt ggtctttggc ccaatgccag aatcgtggac 841 aatgatagaa atattgacac tctacaagta caagaaatca atgcgatttc aatggacacc 901 aatgactccg ttgaaaagtt ttcatccaag acagttgctg ctggtggatt ggcaacttcc 961 acagccacat ccggttccgc tttgaggcca gccccgactg cccacacagc agcagcgagc 1021 acacggatct cgctggataa tcatgaatca tttaatcgca tagcagcacc atcaatggaa 1081 gccatggcta caattgcaac caccatcgcc acctccacaa ccactgtgtc gcccgtcctg 1141 gtgataagtg acaaaaatgt ctccatgatt gattacgaga agcgttcaca tgtcgtaaag 1201 atgatgcaac atgcctggca aaattacaaa ctctatgctt ggggtaaaaa cgaattgcga 1261 cccctttcac aacgggccca catcggtagt atatttggtt ctcaagaatt aggtgctaca 1321 attatcgatg gtctggatac cctttatata atgggcctgg agaacgagta caaagaggga 1381 cgtgattgga tcgaacggaa gttctcactg gacaatgtca ccgccgactt gtcagtgttt 1441 gagacgaaca ttcgtttcat cggtggcctg cttacaatgt atgcctttac cggtgataat 1501 ttgtacaaag aaagagccca acatgttgcc gacaaattat tgcccgcatt ccagacgcca 1561 accggtattc cttatggtct cgtcaatccc aaaacaggat tgagtaaaaa ctatggatgg 1621 gcttcggggg caagttcaat tctctcagaa tttggcactc tgcatttaga atttagctat 1681 ttgagcgaca tcaccggcaa tcctctgtat aaggaaagag tacaaacgat cagacagata 1741 ttgaaagaaa tcgaaaaacc caaaggatta taccccaact ttttgaatcc caaaactggc 1801 aagtggggcc aattacacat gtctcttgga gccttgggtg acagtttcta tgaataccta 1861 ttaaaggcgt ggcttcaatc cggtcaaacg gatgaggaag ctcgccaaat gtttgacgaa 1921 gccatggttg ctattatcga tcatatggtg cgcacaagtc taaatggttt aacgtatgtt 1981 tctgatttga agtttgatcg attagaacat aaaatggatc atttggcatg ttttgctggt 2041 ggtctttttg cattgggtgc caatacgaga caaaatgaac acacggagaa attcatgagt 2101 atagggaaag gtattacgaa tacctgccat gaaagttata tcagatcgac aacacattta 2161 ggaccagaag cattccgctt tagcgaagcc gccgaggccc gtgccttgaa atctaatgaa 2221 aaatactaca ttctaagacc tgaaaccgtg gagagttact tagtgctctg gcgcttgaca 2281 cacgatcaaa aatatcgcga ctggggctgg gatgcggtgc aagccctaga gcagcattgt 2341 cgcacaccac atggctattc gggcattaaa aatgtctacc aagatgcacc acaaaaggat 2401 gatgtgcaac aaagtttctt tttggcagaa acacttaagt atctgtatct cctgttttcg 2461 gatgattcgc tgatacccct ggatgaatgg gtcttcaata ctgaagctca ccctttaccc 2521 attaagggat cgaacatcta ctaccgccaa gcggcgtcaa catccgccgc agcaacgaat 2581 gcttcctaaa atgcaaattt agccaaattg tgggatgtct tagattcaaa tctattccat 2641 atgctgctcg tagttgtttt aagtttcttt ctctttgtct attaccgttg ttttcggtag 2701 actcatatcc caatattgac atttgagtta tgacggctca tgcgccccct gttctgcagg 2761 cggtcatgca acaaaattgt atctttttat caaaaccgat tgttcttctt tcccgctatt 2821 attttatttt tgtttttttt ttacctagtc aagtaaagtt gacttcgtct tttattctgt 2881 ttttaaatta atttgaattt tgatatgaga cgtgtgttaa atagcagatt atgccaaagt 2941 ttccaacagc cttatgctag aaggctgaat gaagttttca aaatcaaaaa ctatctttta 3001 ttgtctattt agagtaatgc aattgtctgc catttgacat tggggtcctt atgatcgatc 3061 ctctttgtat cgccggatca gctgcaacaa taataactac aacaacaaca aaaatataaa 3121 ctttaaataa ttcgcacaca tttgtagaac taactatcga attttcaaca ccctctgtag 3181 aattatataa ttttgtatga taattaccat ttaatattac taaagaacta tgaacaaaac 3241 aaaacaatat ttcaacaata aacgtaataa tgacaaaagg tcaatctcta caatttcaaa 3301 tcgcatgcac catttttagt ttgtttttat atacatacat atatacgagt gtgtatgtat 3361 attttttgta gcataatttt tttctcgcta atttaatatc ttagttgtac gttcatatat 3421 actgcttaga tattacttag aatttataat tgtttgaatt ttagtttatt taatatataa 3481 atatgcatcg tttttgttcg taatttatat tatgtatgtt aatattatta atagcaagca 3541 atgtttcctc ttatgtttta aatttttcct aaatatttgc aaccgaggca acttccgtat 3601 tcaatctaat taagttcaat ttgttaaaca tatagcaaga attttgaagt acacaattta 3661 tgaagattat gacgaagaag aatagatatt ttatcaaata catccataac gcacccactc 3721 gaacatactt tgtgtacgtg aaatatccaa atgccgtgat ataaagattt tcttattttt 3781 aagcaggagg ttaaatcaaa aataaaatta aaacattttg ttgagaaatg ttcttcaatt 3841 acaattttaa acgaaatttg tattatttta ttcctttgct gtttgtaaaa aatgtgtcca 3901 ttttacataa atgtattttt gctgtagttc agaatttgcc aaaaaaaaaa atgttttgaa 3961 tattttaact ttgcacctct tttatggatg atattattca ataactctgc atcattggtg 4021 ctgtctcgtc tcctctattt tccttcttca atgcctgtaa gaaaaaaaca atctgtcata 4081 aaactgtgca tttcgaacac ttccgcaaca tctaacgacg ataacatgat cggggaatct 4141 atgtcgattt actgtattac ttgtacctac cataggattt gtcctacaaa tgtgatctac 4201 aattcaaatt tattagccaa aaatgtttag atttttttct agttgtgtaa aagaacccgc 4261 ttgtcgacag ggactcatgc catttctatg aacatgaatt gattgattga ctacatgtta 4321 tttaaagcct atctgatggc ccatatgaac ataaattaca aaattatcta cagagatatt 4381 aacggcctta ttcacaataa cattttatta tgagtttaaa atctcattaa actattcgca 4441 tacctagtta tggcctaaaa cttggactgc cttgaaaggc tacacattca ccaaatttat 4501 tgatagcagt tctctagctc ttacagtcaa gaggtcatta ctccactatt gcccagcacc 4561 aaatcgttgg ggatttggca ttccccggga aggaaagaac tccaagacag tgcgtgtcac 4621 catcttagtc ccggcacgtg aacattgagg tccgatctgt ttggcgttct tcgctgtcac 4681 gagaagcttc gctgcgaaca atcagcggta tcgagcggag agtcgcagtg aaaagtcgga 4741 tgggaccggc tcttccaaaa atattgagtg ccgatgatcc tcgatatgac aaggcgagtt 4801 attgacgtaa ccatcttggt tgttatttcc ctattggtta actaactgtc cataaaaacg 4861 ttcaccctcg attttgcgtt gacactgcac catctcaggt ttgtaagatt ttcgcgtcca 4921 caggtcgtcg cggacaatca ggtatcgagc ggagtctcag tgagaggtcg gatggcatcg 4981 gctcttccaa aatattgagt gcctatgatc ctcgatatga cacggcgaat tattggcgca 5041 accatattgg atgttatttc cctattggat aactaactgt ccataaaaac gttcaccctc 5101 gatgtttttg cgttgacact gcaccatctc aggttattgg cggtggtttg taagatttct 5161 taaaatatta tgataatgtc atgttcagaa aatgcgtcaa tttcctcctt aagccaattt 5221 cctccttagg aatagtcgcg gaaattttaa ttgttccacg agcccaattt aacagcaatc 5281 aaatattttt gtttccatac caaaacactt ttttctgcac tttttgtttt ctctacttaa 5341 ttttttttgc acataaagaa agaagaacga acagttgaaa tcaataaaac atacaaatat 5401 ggttacaatg gtacaatggt ttcaagtgtt gccactttgc tttttttttg tcattttcct 5461 cacgataagc agagtactat tacttttccg cctgttttta gccaacgttt cgccgacgtt 5521 tttttatttg gagtttgaca gcattccgct caaaaagctg aacataatac tcagctttac 5581 actctaggcc tgttcttggt tttaccgtct tgattgtaat ggccctaagg gccgagaaga 5641 tattcacact cggcaatctc gcattaaaac cgtaccacca gacacgtttc tgctatggtc 5701 agcgagagga aacagaactc ggtccatgag ttcgcaatac aggcgactag acgagttctt 5761 tcttctagct ttgatccgtc cgcgaaatat taactattag atttcaatca acagttgatt 5821 gtgatgctag aaaaaatgtc tcaaactcga cctcaattgt ggttcttatt gtcgctagat 5881 tcgtttgtgg tcctcgtcaa gcatgcttat tccggtcgat acgaacgcaa tgactgcatt 5941 atagccattg gttatttaaa gacgccaata actcgccatg cacagaaaaa tataactctt 6001 agaaaaaacc aactacccaa tttctgtgtg aaattttaaa ttctcatcaa atttttgcat 6061 tgaatcgaag acaactcaaa cacaacacaa aaactcccat ggcattcacg acttgcaaac 6121 acaggttcaa gtcccccgac aagacaaaat aaattaatat ttattcatta aacttgtttt 6181 cgaaaatttg gcataaaaaa tatgtatttc gtattcacag aaaaatttta gagtggtttt 6241 tacctttttt taaattaaat aaattgagat acttattact gtgcagcagt acttaacgag 6301 ttatttcatt ataaagaaga tgatgttggt aggctagtgg atgcgtacaa gactaccaaa 6361 catgcgtcac caaaattatc gaaattttta agggtaataa tagagagagt ggcagagagt 6421 agcgaacgaa tcggacaaag aaaataaaaa cacaccagca gccgaagcaa agcacatgcg 6481 gcgggctggt agatgttttt tttgtcttgc ttatggatgc tgtttttgtt gttatatgat 6541 ggcttgaaaa gagtgccttt caacaacaaa tttgtacttt gggtcgttgg gattcaaaat 6601 aaattattgc aggaaaactg ccaacttccg tagatgtttt ttccaccaaa gttgctgctt 6661 ttcaaaatta tttttatctg tgtgtcatat cgagtatcac aggcagtcag tatttaggca 6721 ggagtctgcc ggccgacctc atactgagaa tatctcctcg atatcgttga ttgttcgcga 6781 ctgcagttgt aaatcacaca aaacgaagcg tagaattcca acccgtgtgg tgcttccgtg 6841 tcggtttgga tcatcataat tttttttagc accacgagcc taagtgagag caacactacc 6901 gttgatttta taaatcttta aattgatggt ccaggcttaa aaacgggtcc actctttgta 6961 aaatctgagt cggagttacg gagttaacag tttaaaaatt ggctggaaat tggaacgcag 7021 agtacactta tgttatggaa caaccacatc aagcaacgta caggtataac aacttaaata 7081 aagaacatca agaataacat atttcgtagc tacctacaca accactgtga tacagggaat 7141 tataacttaa tgattttttt tgtaacgaga gagatggaac gagaacgaga aaagatggac 7201 ccattaataa tcgatgatcg actcgtaatc attttttgat tccaactagc catgtagttt 7261 gtctaccaaa ggcctgcaca agataatttc caaaacacac ttttttatat gagacagaca 7321 cgacaacgat ttttgtgatc agttcatctt ttgaaaatga cagcgagacg ctttcatatg 7381 actcagtgtg cggcgtgtta tgaccctccc ccttttgcta aaaacacaac acaaaatcaa 7441 aagtggaccg atctggacat caaatgaaag atattggaga gtagaatacg aatatggcat 7501 taaaatatca gtctaagtac ctatcgggcc gccccaaccc aaaactcccc caaacagaca 7561 tattggggct caaatgaaag gtattcggga gtagattacg ggcatatgcc caatcataac 7621 tatatgggac tccgttagtt tgtttgttcc gtagaatcaa aaacgactga accgattttc 7681 ttaaaatttt cacagattgt gtaggtttgt ctggaagaaa acataagctt tataattctt 7741 agatatcgga cgtgggcgga cccttcacct taccacaaaa acgccaccca aaaccaatag 7801 tgaactggta ggcacaatat gggtatcgaa tggaaggtat tgactagaaa acgaacatcg 7861 tattaaaatt tgatccaagt acccagaaag tcggatacaa tcgactttca tgtcactatg 7921 ggactcaaat gataagtatt ccgcagaaga ttacaaatat ggcatacaaa attaggtcca 7981 agtaatggga ggtcgaccca cccccaactg accatggcta tatgagactc aaatgaaagg 8041 tatttggcag tagattacga atatgaatat gagattgaga gtaaaggaac gaatttgata 8101 tttgttttca ggacaatgtg ccggtggccg ccccagcccc aaaacaccct ccaaacgctt 8161 catatttacc aaacatggca atatggggct taaattaaag ggatttgtga gtcgagaacg 8221 aatttgatat ccacatttga gtcgtaatga ctgaggttcc ttcaaaatca cttctttcct 8281 taaaatcact tttcattgcc ataattttca aaaacagtag atctcggaga ttggtaatgt 8341 aatactttcg aaatattttt gcactctcac agtcaccata accaaaacat ggtttctatt 8401 ggtgaggtcg ggtgccttgg gggccgccca aaacccgcca aatggatgta tagatcaatc 8461 acgacaattt agcattgcga cacctctttg gggagaattt tgtataggac catgcatgac 8521 atggcacctc gcaaatgtcg ccagcattaa gagggggtaa aaacagcttt aaattttgtc 8581 cgatgttctc gccagacttc aaacgcatgc gttcaacgtc ataggctaca gtggcacgaa 8641 ttcgatatcc acattcgaat ttgatatcca cattcagggc caagt