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LOCUS XM_013249585 4219 bp mRNA linear INV 02-SEP-2023 protein-binding family B member 1-interacting protein (LOC106085358), transcript variant X2, mRNA. ACCESSION XM_013249585 VERSION XM_013249585.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249585.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4219 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4219 /gene="LOC106085358" /note="amyloid beta A4 precursor protein-binding family B member 1-interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:106085358" CDS 559..3555 /gene="LOC106085358" /codon_start=1 /product="amyloid beta A4 precursor protein-binding family B member 1-interacting protein isoform X2" /protein_id="XP_013105039.1" /db_xref="GeneID:106085358" /translation="MANLEETQESELDVILGELSLLEAQIATGDANFLPAAGAPGGMC TPSSTRTHSRTNSTISGATSISGSSEGGSSSTSHSLCSSSGISENGSHASHNPSLQST NNGPTTQLREPRTESPDNDSAFSDTVSLLSSESSASSGMSSALHHKRLMHHQHQPVLP LSGNTKAAKIQLALHKLETAPIRRLFVKAFTSDGASKSLLVDERMTCGHVTRLLADKN HVQMQPQWALVENLGDLQMERLFEDHEQLVDNLMTWNSDAGNRVLFQQRSDKISLFIR PELYLPGPQMAPGSQHDEHTRSMLLEEFFETNAEIQVDGPLYMKADPKKGWKRYHFVL RSSGLYYFPKEKTKNVRDLLCLTLFNGYNVYRGLGWRKKWKAPTDYTFGFKSAVDSSL GKSCRTLKMLCAEDLETMEKWLTAIRVAKYGKQLWDNHKALMDELTMGSDGISQSSFA VSMRSESISSISSAVPSQCGSVSSAISSMSASSSGGRVSRASSSSSSGCLSDDNNGFD SEFTTGTIKRKPSMKPNLPLTTMTRQLKEVGEITQADNDELNTSPEHSGTLTRRHSRR KSQESNGSGTLKRRPAGASAAAVMMTGLTKRGSAESMNANNSSGSSNSTPTPTPSICA KPLVAASSVYQDSQLPPPPPSVLNSVGGVDAMSSSTLSLDSLPPPPPPAALNESEHDV YGSQLSLVSLPPPPPPEEVAMTPTTPTAAPPSSIMYTTATVHKMPPPAVPAKPIKPAV KTAPPYKNPPDYKGNQCNQMSNNQPPPPPPTQKKVSFADSPVLLRRKMHSPEPQHQEP FYAPGPLPPPRNDLTRLSNCSSTISSVSQQDYGSPKRLQESQSNPPRDFLKDLQRVMR KKWQVAQKCKLEPATTPHEVLGFRDFSSEELLAHNLNSNSHFYRETANVSNWVQEHYG AGVACEPPPLNEYALYENIHTNSANNGVVEGQQYGHAPATMQAPPPPQMATASAAAHN DMAKRNKRPPPPPPKRSDSTHLTHRV" misc_feature 1105..1359 /gene="LOC106085358" /note="Ras-associating (RA) domain found in Caenorhabditis elegans abnormal cell migration protein 10 (MIG-10) and similar proteins; Region: RA_MRL_MIG10; cd16138" /db_xref="CDD:340555" misc_feature order(1120..1122,1135..1158,1204..1215,1258..1260, 1312..1317,1324..1326) /gene="LOC106085358" /note="RA-PH-RAP1 interaction site [polypeptide binding]; other site" /db_xref="CDD:340555" misc_feature 1492..1851 /gene="LOC106085358" /note="Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain; Region: PH_APBB1IP; cd01259" /db_xref="CDD:269961" ORIGIN 1 cattccaaaa agacggcggc ggctggctac acccaaaacg aagttcttgc agatcgacag 61 tcgtcatcat catcatcaac atcgtcgtca tcttcaacgc cacaagttct aaacaaccat 121 aatcatcatc aacagcagca gcagacacag cataatcatc aactaccaca ccaatcggtt 181 cattatctgg acgaaacgat taaaaatctc accaatctag ccgatacttg ccagagtatt 241 ggcaaaagtg ccattgcaac tactgctggt ggccagagca acagttgcta ttccagtccc 301 tccaaattgc aggcagtagg tggtgattat tatcaaaatt ttctcaactc ccaattgccg 361 gccacattgt ctggaggcgc cagcagcagc ggcggcggct tgttgtcctc ctcgccagtt 421 gtagctgggg cagctggagt taagttacgc aaatattctg atcgctgtct gaacttgtca 481 tcttcccccg gcggtgttgg tgagggtggt ggtgttggct cctcctcctc gtcatcctca 541 cattcatatc gcatttcaat ggccaatctg gaagaaacac aagagtccga acttgatgtc 601 atattgggcg agctaagtct gctcgaagca caaatagcca caggtgatgc aaattttctg 661 ccggctgcag gagcgcccgg aggcatgtgc actccctcct ccacacgcac acattcacgc 721 acaaattcca caatttcggg ggccacctca atatctggct cctcagaggg cggcagcagc 781 agtacttcac attctttatg ttcctcatcg ggtatatcgg aaaacggtag ccatgctagc 841 cataatcctt ccttgcaatc aacaaacaat ggtcctacaa cacaactgag agaaccccgc 901 accgaatcgc ccgacaatga ttcggctttc agtgataccg tgtcgctgtt gtccagcgaa 961 tcttcggcct cctcgggcat gagttcggcg ctgcatcata agcgtcttat gcatcatcag 1021 catcaaccgg tgctgccgct gtcgggcaac acaaaggcgg ccaaaataca attggccttg 1081 cataagttgg agacggcacc cattagacgg ctgtttgtga aggccttcac ctcggatgga 1141 gcttccaaat cattgttggt cgatgagcgt atgacgtgcg ggcatgtgac acgtttattg 1201 gccgataaaa atcatgtaca aatgcaaccg caatgggctt tagtagagaa tctaggcgat 1261 ttacaaatgg aacgtctctt cgaagatcac gaacaattgg tggacaatct aatgacctgg 1321 aattccgatg ctggcaatcg tgtactcttc caacaacgct ccgataaaat atccctcttc 1381 atacgtcctg agctgtattt acccggtcca caaatggccc ctggcagtca gcatgatgag 1441 cacacgcgct ccatgctttt ggaggaattt tttgagacca atgccgagat acaggtcgat 1501 gggcctttgt acatgaaggc cgatcccaaa aagggttgga aacgctatca ctttgtattg 1561 cgcagttccg gcctttacta ttttcccaaa gaaaaaacta aaaatgtgcg tgatttgcta 1621 tgtctcactc tgttcaatgg ctacaatgtc tacaggggtt tgggttggcg caaaaaatgg 1681 aaagccccta ccgattacac ctttggtttt aagtctgccg tagactccag cttgggcaaa 1741 tcgtgtcgta ctttgaaaat gctatgtgcc gaggatttgg aaaccatgga gaaatggttg 1801 actgccatac gagtggccaa atatggcaaa caattgtggg ataatcacaa agccttaatg 1861 gacgaattga ccatgggcag tgatggcatt tctcaaagta gttttgctgt gtccatgcgt 1921 tccgagtcca taagcagcat ttcttcggca gtaccttctc aatgcggcag tgtttcttcg 1981 gccatttcca gcatgtcagc ctcctccagt gggggacgag tatcgcgggc ttcttcctcc 2041 tcctccagcg gttgtttgtc ggatgacaat aatggtttcg attcggaatt caccacaggc 2101 accataaaac gcaagccctc catgaagccc aatctgcctt tgactaccat gaccaggcaa 2161 ttgaaggaag tgggcgaaat tacccaggcc gacaatgatg aattgaatac ctcgcccgag 2221 cacagtggca ctttgaccag gcgccacagc cggcgaaagt cacaggaatc caatggcagt 2281 ggcacgctga agcgacgccc tgccggtgcc agtgctgctg cggtaatgat gactggcctc 2341 accaagcgcg gttcggcgga gagcatgaat gccaataatt cctcgggctc ttcgaattcc 2401 actcccacac caacgcccag catatgtgca aaacctttgg tggctgcatc atcagtttat 2461 caggacagtc agttgccccc acctccgcct tcggtcttga acagtgtggg cggagtagat 2521 gcgatgagct cttctacttt gtccttggac tctctgcctc caccacctcc cccagcagcc 2581 ttaaacgaga gtgaacatga tgtctatgga tcacaattgt cattggtctc attacctcca 2641 ccaccgccac ctgaagaggt ggccatgaca ccgaccacac ccacggcggc gccccctagc 2701 agcataatgt acacaacggc aacggtgcac aaaatgccac cgcctgcggt accagccaag 2761 cccattaagc cggcggtgaa gacagcacca ccctacaaga atcctcccga ttacaaaggc 2821 aatcagtgca accaaatgag caataaccag ccaccaccac cacctcccac acaaaagaag 2881 gtctcctttg ccgattcgcc ggtgcttctg agaaggaaaa tgcattcgcc cgaaccgcag 2941 caccaggagc ctttctatgc cccggggccg ctgccaccgc caagaaacga tctcaccaga 3001 ctttcaaact gttcttcgac catctcatca gtgtcgcagc aggactatgg gtctcccaag 3061 cgcttgcagg agtctcaatc aaatcctccc agggatttcc taaaggattt gcaaagagta 3121 atgcgcaaaa aatggcaggt ggcccaaaaa tgcaaactag agccggccac cacaccccac 3181 gaggtcttgg gcttccgaga cttttcctcc gaagagctgt tggcccataa tctaaactca 3241 aattcccatt tctatagaga aactgctaat gtcagcaatt gggtgcaaga acactatgga 3301 gcgggtgtgg cctgtgaacc tccaccactc aatgaatatg cactctatga aaatatacac 3361 acaaactccg ccaataatgg ggtagttgaa ggacaacaat atggccatgc tcccgcaaca 3421 atgcaggcac cacctcctcc acaaatggca acggcgtcag cggcggcgca caatgatatg 3481 gccaagcgaa acaagcgacc tccaccaccg ccaccaaaac gcagcgattc cacgcatttg 3541 acgcatcgcg tttagtcttt tctgggcacg tgctttaggg cacgaggctt ctggcagaaa 3601 tgagcagcaa ctagttgtag aaaaattgca aagcagcagc cgccaaaaaa caaaaacaga 3661 acagagtagc agcatcaaaa tttcgaataa taatatattt ccatatttgg cgatcactac 3721 tacctactac cactaccaca aaaacaacta ctatacatat acataaatat ttcaaaaatt 3781 aactaaaagc ctagactcca tatatagaaa tttttttaaa agaattttgt tttgtgtgta 3841 atttaaattt taagtattta aaaagtgctt ttaaaaatat ttcgtcataa gttttatctc 3901 aaaaacaaaa aagcaaatca aaacaaaaac cggcattcat taaataattc attgcgtcta 3961 gtttcttaag ctaagttcct ttgtttatga attgtaaact aacagtgttt tcttattttt 4021 tctttctttc ttgtaaaatg tttgttatac atatatacaa aattatacac atacacacat 4081 ttatacactt ctctttatac gtttagttta tatatacata cataaatata tgcaatgaat 4141 ttcgattatt cgctactgcc ttaaagtatg caataaattt tatttaaact aaaaatacaa 4201 aaaaaaacac aaaattctg