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PREDICTED: Stomoxys calcitrans amyloid beta A4 precursor


LOCUS       XM_013249577            5356 bp    mRNA    linear   INV 02-SEP-2023
            protein-binding family B member 1-interacting protein
            (LOC106085358), transcript variant X1, mRNA.
ACCESSION   XM_013249577
VERSION     XM_013249577.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249577.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5356
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5356
                     /gene="LOC106085358"
                     /note="amyloid beta A4 precursor protein-binding family B
                     member 1-interacting protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:106085358"
     CDS             1171..4692
                     /gene="LOC106085358"
                     /codon_start=1
                     /product="ras-associated and pleckstrin homology
                     domains-containing protein 1 isoform X1"
                     /protein_id="XP_013105031.2"
                     /db_xref="GeneID:106085358"
                     /translation="MDCSLADRQSSSSSSTSSSSSTPQVLNNHNHHQQQQQTQHNHQL
                     PHQSVHYLDETIKNLTNLADTCQSIGKSAIATTAGGQSNSCYSSPSKLQAVGGDYYQN
                     FLNSQLPATLSGGASSSGGGLLSSSPVVAGAAGVKLRKYSDRCLNLSSSPGGVGEGGG
                     VGSSSSSSSHSYRISMANLEETQESELDVILGELSLLEAQIATGDANFLPAAGAPGGM
                     CTPSSTRTHSRTNSTISGATSISGSSEGGSSSTSHSLCSSSGISENGSHASHNPSLQS
                     TNNGPTTQLREPRTESPDNDSAFSDTVSLLSSESSASSGMSSALHHKRLMHHQHQPVL
                     PLSGNTKAAKIQLALHKLETAPIRRLFVKAFTSDGASKSLLVDERMTCGHVTRLLADK
                     NHVQMQPQWALVENLGDLQMERLFEDHEQLVDNLMTWNSDAGNRVLFQQRSDKISLFI
                     RPELYLPGPQMAPGSQHDEHTRSMLLEEFFETNAEIQVDGPLYMKADPKKGWKRYHFV
                     LRSSGLYYFPKEKTKNVRDLLCLTLFNGYNVYRGLGWRKKWKAPTDYTFGFKSAVDSS
                     LGKSCRTLKMLCAEDLETMEKWLTAIRVAKYGKQLWDNHKALMDELTMGSDGISQSSF
                     AVSMRSESISSISSAVPSQCGSVSSAISSMSASSSGGRVSRASSSSSSGCLSDDNNGF
                     DSEFTTGTIKRKPSMKPNLPLTTMTRQLKEVGEITQADNDELNTSPEHSGTLTRRHSR
                     RKSQESNGSGTLKRRPAGASAAAVMMTGLTKRGSAESMNANNSSGSSNSTPTPTPSIC
                     AKPLVAASSVYQDSQLPPPPPSVLNSVGGVDAMSSSTLSLDSLPPPPPPAALNESEHD
                     VYGSQLSLVSLPPPPPPEEVAMTPTTPTAAPPSSIMYTTATVHKMPPPAVPAKPIKPA
                     VKTAPPYKNPPDYKGNQCNQMSNNQPPPPPPTQKKVSFADSPVLLRRKMHSPEPQHQE
                     PFYAPGPLPPPRNDLTRLSNCSSTISSVSQQDYGSPKRLQESQSNPPRDFLKDLQRVM
                     RKKWQVAQKCKLEPATTPHEVLGFRDFSSEELLAHNLNSNSHFYRETANVSNWVQEHY
                     GAGVACEPPPLNEYALYENIHTNSANNGVVEGQQYGHAPATMQAPPPPQMATASAAAH
                     NDMAKRNKRPPPPPPKRSDSTHLTHRV"
ORIGIN      
        1 gtgttgtgta taatttttta cactcttttt ttgttatttt attgattgta ttgtgtgtgt
       61 tgcagtagaa gaagaaaacg ggtcttttgt gtgtttattg ttgttgtctt cgcgtcatct
      121 tgttgttggt ggtaaaggaa ataatcttaa gagttgtgtt tatatgtggg tgggtgtaag
      181 gaaacactct gttcgttcgt tcgtgtgcat aaacaacaat agcagcacca aaaacaacaa
      241 acgatacgaa aagaagcgaa acagcgaaac acaaacgtaa agccgtaaat tttttctgaa
      301 acaaatgtga aaattgccca gaaaaattgt gggtcgttaa atacaaaaac aaagatccat
      361 tgaggattta aaaacgccta cgcgcaaaaa attaatgcat ccgaaaaaaa ttgagaaaat
      421 aaccagaaat atactcgttt tcgggtgtta aaacaagtca taataaatac acataaaaaa
      481 tacagtgcaa gcaattgaaa agaatcgttc gtttggtcgg tcggtcgaaa aagaaatgag
      541 attttgtatc ggcttttttt tgcaggcatt attaagttgt tgttgtgtgg tgtgtgtgca
      601 aagtgcatta tcatactttt acaaatttac tctactactc caatctcctt gtcagcagta
      661 acgcataaaa cttgcataca catatcgttt ttcaatttta tcgcttgagt tgcgggttct
      721 tggtgaatga ctgtgctatc tatcccaaac cccgtccctt agtcgatatt tactttgtct
      781 gctgaacaac gtttggggcg ctcgctctca tttgcataca cttaggtaag aagagtgagt
      841 gtatgcgcct ccttcctcgt tctcgtccct cgcaagtgtg acttttgcac aacaaagtaa
      901 tattgtgcca tcatcagtaa ccgtgtgctg gggccttaag tgagtagaga gtgagtgaat
      961 gagtgttgca tagctgtgcc attctgctgt cttgtatgtc tcttcatcgt ccatctctat
     1021 cagaacatca gtcatcagta gtagagttat tgtgttgtag tttgttgttg tcgcctactg
     1081 cttgtgcttg tgaccagaaa ccaaccaaca tcatataaac gactttgatg ttattattgc
     1141 ctgtggctta aagcaaaaat caaatgtaat atggattgca gtcttgcaga tcgacagtcg
     1201 tcatcatcat catcaacatc gtcgtcatct tcaacgccac aagttctaaa caaccataat
     1261 catcatcaac agcagcagca gacacagcat aatcatcaac taccacacca atcggttcat
     1321 tatctggacg aaacgattaa aaatctcacc aatctagccg atacttgcca gagtattggc
     1381 aaaagtgcca ttgcaactac tgctggtggc cagagcaaca gttgctattc cagtccctcc
     1441 aaattgcagg cagtaggtgg tgattattat caaaattttc tcaactccca attgccggcc
     1501 acattgtctg gaggcgccag cagcagcggc ggcggcttgt tgtcctcctc gccagttgta
     1561 gctggggcag ctggagttaa gttacgcaaa tattctgatc gctgtctgaa cttgtcatct
     1621 tcccccggcg gtgttggtga gggtggtggt gttggctcct cctcctcgtc atcctcacat
     1681 tcatatcgca tttcaatggc caatctggaa gaaacacaag agtccgaact tgatgtcata
     1741 ttgggcgagc taagtctgct cgaagcacaa atagccacag gtgatgcaaa ttttctgccg
     1801 gctgcaggag cgcccggagg catgtgcact ccctcctcca cacgcacaca ttcacgcaca
     1861 aattccacaa tttcgggggc cacctcaata tctggctcct cagagggcgg cagcagcagt
     1921 acttcacatt ctttatgttc ctcatcgggt atatcggaaa acggtagcca tgctagccat
     1981 aatccttcct tgcaatcaac aaacaatggt cctacaacac aactgagaga accccgcacc
     2041 gaatcgcccg acaatgattc ggctttcagt gataccgtgt cgctgttgtc cagcgaatct
     2101 tcggcctcct cgggcatgag ttcggcgctg catcataagc gtcttatgca tcatcagcat
     2161 caaccggtgc tgccgctgtc gggcaacaca aaggcggcca aaatacaatt ggccttgcat
     2221 aagttggaga cggcacccat tagacggctg tttgtgaagg ccttcacctc ggatggagct
     2281 tccaaatcat tgttggtcga tgagcgtatg acgtgcgggc atgtgacacg tttattggcc
     2341 gataaaaatc atgtacaaat gcaaccgcaa tgggctttag tagagaatct aggcgattta
     2401 caaatggaac gtctcttcga agatcacgaa caattggtgg acaatctaat gacctggaat
     2461 tccgatgctg gcaatcgtgt actcttccaa caacgctccg ataaaatatc cctcttcata
     2521 cgtcctgagc tgtatttacc cggtccacaa atggcccctg gcagtcagca tgatgagcac
     2581 acgcgctcca tgcttttgga ggaatttttt gagaccaatg ccgagataca ggtcgatggg
     2641 cctttgtaca tgaaggccga tcccaaaaag ggttggaaac gctatcactt tgtattgcgc
     2701 agttccggcc tttactattt tcccaaagaa aaaactaaaa atgtgcgtga tttgctatgt
     2761 ctcactctgt tcaatggcta caatgtctac aggggtttgg gttggcgcaa aaaatggaaa
     2821 gcccctaccg attacacctt tggttttaag tctgccgtag actccagctt gggcaaatcg
     2881 tgtcgtactt tgaaaatgct atgtgccgag gatttggaaa ccatggagaa atggttgact
     2941 gccatacgag tggccaaata tggcaaacaa ttgtgggata atcacaaagc cttaatggac
     3001 gaattgacca tgggcagtga tggcatttct caaagtagtt ttgctgtgtc catgcgttcc
     3061 gagtccataa gcagcatttc ttcggcagta ccttctcaat gcggcagtgt ttcttcggcc
     3121 atttccagca tgtcagcctc ctccagtggg ggacgagtat cgcgggcttc ttcctcctcc
     3181 tccagcggtt gtttgtcgga tgacaataat ggtttcgatt cggaattcac cacaggcacc
     3241 ataaaacgca agccctccat gaagcccaat ctgcctttga ctaccatgac caggcaattg
     3301 aaggaagtgg gcgaaattac ccaggccgac aatgatgaat tgaatacctc gcccgagcac
     3361 agtggcactt tgaccaggcg ccacagccgg cgaaagtcac aggaatccaa tggcagtggc
     3421 acgctgaagc gacgccctgc cggtgccagt gctgctgcgg taatgatgac tggcctcacc
     3481 aagcgcggtt cggcggagag catgaatgcc aataattcct cgggctcttc gaattccact
     3541 cccacaccaa cgcccagcat atgtgcaaaa cctttggtgg ctgcatcatc agtttatcag
     3601 gacagtcagt tgcccccacc tccgccttcg gtcttgaaca gtgtgggcgg agtagatgcg
     3661 atgagctctt ctactttgtc cttggactct ctgcctccac cacctccccc agcagcctta
     3721 aacgagagtg aacatgatgt ctatggatca caattgtcat tggtctcatt acctccacca
     3781 ccgccacctg aagaggtggc catgacaccg accacaccca cggcggcgcc ccctagcagc
     3841 ataatgtaca caacggcaac ggtgcacaaa atgccaccgc ctgcggtacc agccaagccc
     3901 attaagccgg cggtgaagac agcaccaccc tacaagaatc ctcccgatta caaaggcaat
     3961 cagtgcaacc aaatgagcaa taaccagcca ccaccaccac ctcccacaca aaagaaggtc
     4021 tcctttgccg attcgccggt gcttctgaga aggaaaatgc attcgcccga accgcagcac
     4081 caggagcctt tctatgcccc ggggccgctg ccaccgccaa gaaacgatct caccagactt
     4141 tcaaactgtt cttcgaccat ctcatcagtg tcgcagcagg actatgggtc tcccaagcgc
     4201 ttgcaggagt ctcaatcaaa tcctcccagg gatttcctaa aggatttgca aagagtaatg
     4261 cgcaaaaaat ggcaggtggc ccaaaaatgc aaactagagc cggccaccac accccacgag
     4321 gtcttgggct tccgagactt ttcctccgaa gagctgttgg cccataatct aaactcaaat
     4381 tcccatttct atagagaaac tgctaatgtc agcaattggg tgcaagaaca ctatggagcg
     4441 ggtgtggcct gtgaacctcc accactcaat gaatatgcac tctatgaaaa tatacacaca
     4501 aactccgcca ataatggggt agttgaagga caacaatatg gccatgctcc cgcaacaatg
     4561 caggcaccac ctcctccaca aatggcaacg gcgtcagcgg cggcgcacaa tgatatggcc
     4621 aagcgaaaca agcgacctcc accaccgcca ccaaaacgca gcgattccac gcatttgacg
     4681 catcgcgttt agtcttttct gggcacgtgc tttagggcac gaggcttctg gcagaaatga
     4741 gcagcaacta gttgtagaaa aattgcaaag cagcagccgc caaaaaacaa aaacagaaca
     4801 gagtagcagc atcaaaattt cgaataataa tatatttcca tatttggcga tcactactac
     4861 ctactaccac taccacaaaa acaactacta tacatataca taaatatttc aaaaattaac
     4921 taaaagccta gactccatat atagaaattt ttttaaaaga attttgtttt gtgtgtaatt
     4981 taaattttaa gtatttaaaa agtgctttta aaaatatttc gtcataagtt ttatctcaaa
     5041 aacaaaaaag caaatcaaaa caaaaaccgg cattcattaa ataattcatt gcgtctagtt
     5101 tcttaagcta agttcctttg tttatgaatt gtaaactaac agtgttttct tattttttct
     5161 ttctttcttg taaaatgttt gttatacata tatacaaaat tatacacata cacacattta
     5221 tacacttctc tttatacgtt tagtttatat atacatacat aaatatatgc aatgaatttc
     5281 gattattcgc tactgcctta aagtatgcaa taaattttat ttaaactaaa aatacaaaaa
     5341 aaaacacaaa attctg