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PREDICTED: Stomoxys calcitrans ubiquitin-conjugating enzyme E2 N


LOCUS       XM_013249504            1475 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106085301), transcript variant X3, mRNA.
ACCESSION   XM_013249504
VERSION     XM_013249504.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249504.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1475
                     /gene="LOC106085301"
                     /note="ubiquitin-conjugating enzyme E2 N; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:106085301"
     CDS             277..732
                     /gene="LOC106085301"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 N"
                     /protein_id="XP_013104958.1"
                     /db_xref="GeneID:106085301"
                     /translation="MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPTD
                     SPFEGGIFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIR
                     TILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIKNAREWTQKYAVED"
     misc_feature    286..717
                     /gene="LOC106085301"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; Region: UBCc_UBE2N; cd23813"
                     /db_xref="CDD:467433"
     polyA_site      1475
                     /gene="LOC106085301"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tagtacaacg agtgtgattg tagagtgatg tttttttatt tgttctgtga aagtgccgtg
       61 cgctggaatt acacctaaat tctttttgtt ttgttctgcc agtgttagtt ttccacatta
      121 attaagcagt cactgctaca gtgcatcgat cggaaaaggc gtaaagaaag aaacattgta
      181 aaggcattaa aaacagaacg cattaagtgc ttgtttgaaa tcaatcgttg aacaaaacga
      241 aagagagcgt gtaataccta agcccaacca gtcaacatgt ccagcctacc ccgtcgcatc
      301 atcaaggaaa cacaacgttt aatgcaggag cctgtaccgg gtatcaatgc cattccagac
      361 gaaaataatg cacgatattt ccatgtcatt gtcactggtc ctaccgattc gccattcgaa
      421 ggcggtatct ttaagttaga actatttttg cccgaagact atccaatgtc cgcacccaaa
      481 gttagattta ttacgaaaat ctaccatccc aacatagatc gtctgggtcg catctgtttg
      541 gacgtgctga aggataagtg gagtccagcc ttacaaattc gcactatttt gttatcgatc
      601 caggcattac taagcgcccc caatcccgat gatcctttgg ccaatgatgt cgctgagtta
      661 tggaaagtca atgaggctga ggccataaag aatgctcgtg aatggactca gaaatatgcc
      721 gtcgaagact gaagtactaa tgccggagat gtgttgaaag gaaatgtaat gtgaaaagaa
      781 aatgtgctgg tctgctggtc gggggtgaag attcatgtgt ttatatggga gtgggagaaa
      841 agaagacggc atttggtaat tgcagcatta ttagtaatga aatggggggt catttttgta
      901 gattcttaat tttttgattt ataacaaatg aaggaggcgc gcagggtgtt tcataaataa
      961 ttaaaaaaaa actaaaacaa atgcgaaaac cctaagaaag aattgaaagg aaagtagaga
     1021 aagttgatta caaaatgtct tggtgaaata aaagaaagaa gaacaacaaa agcaaagaag
     1081 gcaattgtat tttatttatt ttcttccctc acacctggag atatatttca ttttactgtc
     1141 ttgttttttg cttacaacaa caacaacgtt ttaccttttg aactcagtca gatttactta
     1201 caaccatcga aacctttctc cttcgctaat ctcccaaaaa ctactcttct cattttttat
     1261 tattactttt ttcagtttta gttttcattt caagaaacga aataataaat ccatgaaatt
     1321 tagtatttag attgtgtatt caattatgta tgtataattt gtcttctgtt ttttgatttt
     1381 cattacactt aaaacaacta caacaaaaca atcttaaaat tattaattaa aacaaaatat
     1441 ttaaataata aaacaattaa aaaacataaa cctca