Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans ubiquitin-conjugating enzyme E2 N


LOCUS       XM_013249503            1468 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106085301), transcript variant X2, mRNA.
ACCESSION   XM_013249503
VERSION     XM_013249503.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249503.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1468
                     /gene="LOC106085301"
                     /note="ubiquitin-conjugating enzyme E2 N; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:106085301"
     CDS             270..725
                     /gene="LOC106085301"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 N"
                     /protein_id="XP_013104957.1"
                     /db_xref="GeneID:106085301"
                     /translation="MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPTD
                     SPFEGGIFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIR
                     TILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIKNAREWTQKYAVED"
     misc_feature    279..710
                     /gene="LOC106085301"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; Region: UBCc_UBE2N; cd23813"
                     /db_xref="CDD:467433"
     polyA_site      1468
                     /gene="LOC106085301"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acaagtttgt gagtagcttg ctgcgacgag tgagtcggtc ggtaatgtgt gtgtttgttt
       61 cgtttttggg aaaccaagaa taattcttga acaaaagaga gttttccaca ttaattaagc
      121 agtcactgct acagtgcatc gatcggaaaa ggcgtaaaga aagaaacatt gtaaaggcat
      181 taaaaacaga acgcattaag tgcttgtttg aaatcaatcg ttgaacaaaa cgaaagagag
      241 cgtgtaatac ctaagcccaa ccagtcaaca tgtccagcct accccgtcgc atcatcaagg
      301 aaacacaacg tttaatgcag gagcctgtac cgggtatcaa tgccattcca gacgaaaata
      361 atgcacgata tttccatgtc attgtcactg gtcctaccga ttcgccattc gaaggcggta
      421 tctttaagtt agaactattt ttgcccgaag actatccaat gtccgcaccc aaagttagat
      481 ttattacgaa aatctaccat cccaacatag atcgtctggg tcgcatctgt ttggacgtgc
      541 tgaaggataa gtggagtcca gccttacaaa ttcgcactat tttgttatcg atccaggcat
      601 tactaagcgc ccccaatccc gatgatcctt tggccaatga tgtcgctgag ttatggaaag
      661 tcaatgaggc tgaggccata aagaatgctc gtgaatggac tcagaaatat gccgtcgaag
      721 actgaagtac taatgccgga gatgtgttga aaggaaatgt aatgtgaaaa gaaaatgtgc
      781 tggtctgctg gtcgggggtg aagattcatg tgtttatatg ggagtgggag aaaagaagac
      841 ggcatttggt aattgcagca ttattagtaa tgaaatgggg ggtcattttt gtagattctt
      901 aattttttga tttataacaa atgaaggagg cgcgcagggt gtttcataaa taattaaaaa
      961 aaaactaaaa caaatgcgaa aaccctaaga aagaattgaa aggaaagtag agaaagttga
     1021 ttacaaaatg tcttggtgaa ataaaagaaa gaagaacaac aaaagcaaag aaggcaattg
     1081 tattttattt attttcttcc ctcacacctg gagatatatt tcattttact gtcttgtttt
     1141 ttgcttacaa caacaacaac gttttacctt ttgaactcag tcagatttac ttacaaccat
     1201 cgaaaccttt ctccttcgct aatctcccaa aaactactct tctcattttt tattattact
     1261 tttttcagtt ttagttttca tttcaagaaa cgaaataata aatccatgaa atttagtatt
     1321 tagattgtgt attcaattat gtatgtataa tttgtcttct gttttttgat tttcattaca
     1381 cttaaaacaa ctacaacaaa acaatcttaa aattattaat taaaacaaaa tatttaaata
     1441 ataaaacaat taaaaaacat aaacctca