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PREDICTED: Stomoxys calcitrans ubiquitin-conjugating enzyme E2 N


LOCUS       XM_013249502            1559 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106085301), transcript variant X1, mRNA.
ACCESSION   XM_013249502
VERSION     XM_013249502.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249502.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1559
                     /gene="LOC106085301"
                     /note="ubiquitin-conjugating enzyme E2 N; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:106085301"
     CDS             361..816
                     /gene="LOC106085301"
                     /codon_start=1
                     /product="ubiquitin-conjugating enzyme E2 N"
                     /protein_id="XP_013104956.1"
                     /db_xref="GeneID:106085301"
                     /translation="MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPTD
                     SPFEGGIFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIR
                     TILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIKNAREWTQKYAVED"
     misc_feature    370..801
                     /gene="LOC106085301"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 N and related
                     proteins; Region: UBCc_UBE2N; cd23813"
                     /db_xref="CDD:467433"
     polyA_site      1559
                     /gene="LOC106085301"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacacacact ctcactgggg ttgacagcca gcaaaataca aaaagaataa aggaaaaaag
       61 taattcgtgg tgcgttcgtg aaattaaaaa aacgtccatt tgttaagtga aagaatattc
      121 cgaaattatt ttaataagtt catatttatt tgcggcaaaa gttaatagca aaaagccaca
      181 ataaatagtg agttttccac attaattaag cagtcactgc tacagtgcat cgatcggaaa
      241 aggcgtaaag aaagaaacat tgtaaaggca ttaaaaacag aacgcattaa gtgcttgttt
      301 gaaatcaatc gttgaacaaa acgaaagaga gcgtgtaata cctaagccca accagtcaac
      361 atgtccagcc taccccgtcg catcatcaag gaaacacaac gtttaatgca ggagcctgta
      421 ccgggtatca atgccattcc agacgaaaat aatgcacgat atttccatgt cattgtcact
      481 ggtcctaccg attcgccatt cgaaggcggt atctttaagt tagaactatt tttgcccgaa
      541 gactatccaa tgtccgcacc caaagttaga tttattacga aaatctacca tcccaacata
      601 gatcgtctgg gtcgcatctg tttggacgtg ctgaaggata agtggagtcc agccttacaa
      661 attcgcacta ttttgttatc gatccaggca ttactaagcg cccccaatcc cgatgatcct
      721 ttggccaatg atgtcgctga gttatggaaa gtcaatgagg ctgaggccat aaagaatgct
      781 cgtgaatgga ctcagaaata tgccgtcgaa gactgaagta ctaatgccgg agatgtgttg
      841 aaaggaaatg taatgtgaaa agaaaatgtg ctggtctgct ggtcgggggt gaagattcat
      901 gtgtttatat gggagtggga gaaaagaaga cggcatttgg taattgcagc attattagta
      961 atgaaatggg gggtcatttt tgtagattct taattttttg atttataaca aatgaaggag
     1021 gcgcgcaggg tgtttcataa ataattaaaa aaaaactaaa acaaatgcga aaaccctaag
     1081 aaagaattga aaggaaagta gagaaagttg attacaaaat gtcttggtga aataaaagaa
     1141 agaagaacaa caaaagcaaa gaaggcaatt gtattttatt tattttcttc cctcacacct
     1201 ggagatatat ttcattttac tgtcttgttt tttgcttaca acaacaacaa cgttttacct
     1261 tttgaactca gtcagattta cttacaacca tcgaaacctt tctccttcgc taatctccca
     1321 aaaactactc ttctcatttt ttattattac ttttttcagt tttagttttc atttcaagaa
     1381 acgaaataat aaatccatga aatttagtat ttagattgtg tattcaatta tgtatgtata
     1441 atttgtcttc tgttttttga ttttcattac acttaaaaca actacaacaa aacaatctta
     1501 aaattattaa ttaaaacaaa atatttaaat aataaaacaa ttaaaaaaca taaacctca