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LOCUS XM_013249497 7282 bp mRNA linear INV 02-SEP-2023 (LOC106085249), transcript variant X10, mRNA. ACCESSION XM_013249497 VERSION XM_013249497.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249497.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7282 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7282 /gene="LOC106085249" /note="uncharacterized LOC106085249; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106085249" CDS 25..7158 /gene="LOC106085249" /codon_start=1 /product="uncharacterized protein LOC106085249 isoform X9" /protein_id="XP_013104951.2" /db_xref="GeneID:106085249" /translation="MSWVHHHKPSTSSTNNTSSLLTSSSSLSSLAKTANPCSTAQQNF NINASTMPTSPMAAANVAQKQVLPPPTRPPFSSSSSASSLTATSVLRSQATSNNSSLL MTSQQYPNKTNLHTTTNSTMPSMRLSNTSNAPYTLAQQPQQQQRQQYIPPTATPQYGT PNNNTSTTNNHLVQGPFNNNQQNSWQTHSVTSQNYLPTSKMMPQMQPPLPTVGATNAG ANNNWQSGQQNYQSSNMMYQQHAGGVAPQQHQQHQQQQWPQQNSAVNQQMYDNSFNHQ QQQVSNNAYQQQQQQQAAAASYFQQAAAPQPQQQQQPLQTSLTNMSQTTTTNAVNFFD NANNNNNNNQSTGDGWGDWDWNDNSTIEANESAIQHQQQQQQQQISTQMHHPPQSQQQ TQPPPPTAVAAPPPLPAVANDHNQAFNSSNIIADSFNQQSNDTWNWNATNAAVENVPA HVENKTALAKVEQQHNDNWNWTTTNEEDTQPQQQQQQQQTVVTNDHASNDNWNWSSNE TNQQQIAQTTSTVQDIKQAVQPASKSVEAAAIMPLAPPPTEFSSSAVSENHNYNTNAA PQTSTSTNIPNTVFVSQAKPVTLPSRQYASPPMGNTPVSENPPTEGTALMPPQAFQNA EEAAVSRPTNLQSPALPPPTTTVPPPAGLPPAATAAAAGNPFKRSGLAQHHRATALMP TMPQASPAVFNMPPPPPADFANPSSSSNVTLMEPENNEIPSQENQEILAPPAAIMQPS LQPPTSTISLPNAATVAQPPNDERNQYLQTSHLSENSEDQQPEADGLLPPPGLSRLVL GEPELEASQRMVMGTDAPVLGSNATVADVMHLEERHADGEDTASENAVPVISGAMGGV GGQGSPPSTSDRNLYLVPGESNVNNQQRVVTGVELQEQREIEMDGENLEDQQQQQQQQ QQQNHHHQQPQQQQHHNHHQPSPQTHQTLSPEARNEPPVEGAADIIEPSVPAPSVSQP LEQASDAHHHPHQPSKTKESHNNISSPNDDDDSDERLLNERAMDHSTAGSSKSRTKYD NERYGGRVRRSLNRYAAYASDEYVNSDGDGDYSSDREERERRERNDRRRNYREGSVRS DRGGDEDESKRNRRQQRDKRDKYYYEGEERPRAGERSKTDSRRSQRQRGYENDSRYET EESTRFDARKESSRRSMRHSEAAERNRRGDRSDQGGEYEDYPRKGQGYRSSKRSGENY ESDRRDRRRGGDDYDNTIERRRRSDKHRDRDPRYNDPRYDPREYEEYRKHSSRNARDS DLEKEGGGGGGPPRSGRMHHDGRHAAAMYGGYPGGGYYDPYTAYYYQQMARNNPQAYA EWYKKYYGQHAAAVTAGSTQAMPASADTSLTAAANDGRESVHSGRSSAHNDLKDRYTH AYITQANEYHRHYHHHQQQQQHHHQQLQQHHHHQHHLQQMAFNQTHNSTMLVDEDSLN QSTSLYSGIGGGGGLSQAHSQTNLSQIHGGYYVTPSVLQTAAAAGAHATPSLYYARSD YAESRSGAISVRDPDPIASEPQRLTPCKFINEHAVVSFGSGILVTVKPKYTPHGQISN IVKLLKFKPNDETRKLFKVFPGPLVRGLTHKKTVIEFCQEQIRLGPMETTIYAKQLIS NNAEKYRASYTLMWNLLILLLKQNGMVVGTDIAELLLKNQQQFAYQTPNNSMNNSLKS KSGSTSPVAEDNEAIKDDADIANNEESKEDKDQELRESSEEKMPSSSSNALSETEITE KFRNYLLYGNVNEALEWATDNNLWGHALFLASKLDRRSHANVMMKFANKLALNDPLQT LYQLMSGRSPSSVTCVQDEKWGDWRPHLSMILSNTSQKPELDRKAITTLGDSLFNRGD LYAAHFCYLMAQVGFGRYQESATQENTLQQHLPKLVLLGSSHYKQFQEFAHNEAIVMT EIYEYACSLNDDKFSIVEFQPYKFILATRLLDYGFHLKSLMYLEQISVHIARDPTKYE SSFINKVYEMADRLKYYDPVLEKTIDDQQQLGNEEGDNALNTSQQQLEEQKWLQSLRQ MAQQYKIDYAVPANSAVDSQQQQVMDPSFGYQQQHIDQQFMEINKQFSELNLQYQDQQ QQQPQPQQQPTFYNPDLMQQQPQQTQNSMLATDAQQQPLSLDPYQTQNEMPAMQANEQ QQTLDANQSSTTAQTDVYHQQTAAYMQPDMTSYGQNYYDPTQQQQGLQNYNNEGGHMD ATQTTDSGSYDYWAQQQQQVTTAQPYGLDEQHESPPHAQTQALEGQKSAATPKNSTNN SQGEAVRAAAATPKATLLLNNKKSQLKMKTNHNMMMHASPGHLSSQYNKAKLEKVSKL TTTILANTNSSKTNFPVKKSPEVSTKQAFNKLLEYETSSTPSNTQTTLAATATTTTPF SINNPTARKKPPT" polyA_site 7282 /gene="LOC106085249" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 actttgattt tgaataaggc caacatgtct tgggtacatc atcacaaacc atctacatca 61 tcaacaaaca acacatcatc acttttaaca tcatcatcat cattatcctc tttagcgaaa 121 actgcaaatc cttgttcaac agctcagcaa aatttcaata ttaatgcctc aaccatgcct 181 acttctccca tggctgctgc aaatgtagcc cagaaacagg tgttgccgcc accaacgcgt 241 ccaccttttt cctcgtcgtc atctgcatca tcattaacag caacatctgt actgaggtct 301 caggctactt cgaataattc ttctctcttg atgacgtcac aacaatatcc aaataaaacg 361 aatttacata cgaccacaaa tagcaccatg ccgtcaatgc gtttaagtaa tacttcaaat 421 gctccttata cgctggcaca acaaccgcaa cagcagcagc gtcaacagta tataccaccc 481 actgctacac cacaatatgg tactcccaat aacaatacca gcacaaccaa caatcatctg 541 gtacaagggc catttaataa taatcaacag aattcgtggc aaacacattc tgtaacttca 601 caaaattatt tgccaacatc aaaaatgatg ccacaaatgc aacctccatt gccaacagtg 661 ggagcaacaa atgctggggc aaataacaat tggcaaagtg gacagcaaaa ttatcagagc 721 agtaatatga tgtatcaaca gcatgcaggt ggtgtagcgc cacaacaaca ccagcaacat 781 caacagcaac aatggccgca gcaaaattcg gctgtcaatc agcagatgta tgataattca 841 ttcaatcatc agcagcaaca ggtcagcaat aatgcgtatc aacaacaaca acagcaacaa 901 gcagctgcag cctcatattt tcaacaagct gcagcaccac aaccccaaca acagcaacaa 961 ccactacaaa catcattaac caacatgtca caaacaacaa caacaaatgc agtcaatttc 1021 tttgacaatg ccaataataa caacaacaac aaccaatcta ccggtgatgg ttggggtgat 1081 tgggattgga atgataactc tactatagaa gccaatgaga gcgctattca acatcagcag 1141 cagcagcagc agcagcaaat ctctactcaa atgcatcatc caccacaatc acagcaacaa 1201 actcaaccac cacccccaac agcagtagcc gcaccaccac cactacctgc tgttgctaac 1261 gaccacaatc aggcatttaa ttcttctaac attattgctg atagttttaa tcagcaatca 1321 aatgatactt ggaattggaa tgctaccaat gctgcagttg agaatgtgcc agctcatgtt 1381 gagaataaaa cggcactggc aaaggtagag cagcagcata atgacaattg gaattggaca 1441 accacgaacg aggaggacac tcagcctcag cagcaacaac aacaacaaca aacagttgtt 1501 acgaacgatc acgccagcaa cgataattgg aattggtcat cgaacgaaac gaatcagcaa 1561 caaattgcac aaacaacatc tacggtgcag gatatcaagc aagctgttca gccagcttca 1621 aaatctgtag aagccgccgc catcatgccc ttagcaccac ctccaacgga attttcttcg 1681 agtgctgtat cggaaaatca caactataac acaaatgcag cacctcaaac atcgacatca 1741 actaacattc caaacacagt atttgtgtcg caagccaaac cggtgacctt gccctctcgg 1801 caatatgcct cgcctcccat gggcaatact ccggtcagtg aaaaccctcc cacagagggt 1861 actgcattaa tgcctcccca ggccttccaa aatgccgagg aggcagctgt tagcagacca 1921 actaatttgc aatcacctgc tttgccgcca ccaacaacca ctgttcctcc acccgccggt 1981 ttgcctcctg cagcaacagc ggctgcagct ggaaatccat ttaaacgttc gggtttggct 2041 caacatcatc gtgctactgc tttaatgccc actatgccac aagctagtcc tgctgttttt 2101 aatatgccgc cgccaccgcc agcagatttt gcgaatccct catcatcgtc caatgtaaca 2161 ctgatggagc ccgaaaacaa tgaaattccc tcacaagaaa atcaagaaat tttggctccc 2221 cctgcagcca taatgcaacc gtcattgcaa ccaccaacct ccaccattag tttgccaaat 2281 gctgctacag tggcacagcc tcctaatgat gaacgcaatc aatatctgca gaccagtcat 2341 ctatcggaaa attccgaaga tcaacagcct gaagcggatg gccttttacc acctccaggt 2401 ttatcgcgtt tggttttggg cgaaccagaa ttggaggcct cacaaaggat ggttatgggt 2461 actgatgcgc ctgtgctggg tagtaatgcc accgtggcag atgttatgca tttggaagag 2521 cgtcatgcag atggcgagga tacagcttca gaaaatgcag tgcctgttat aagtggtgcg 2581 atgggtggtg ttggcggaca aggttctccc ccctccacat ccgatcgtaa tctgtatttg 2641 gtccctggcg aaagcaatgt caataaccaa caacgagttg tcactggagt ggagttgcaa 2701 gagcaaagag aaatcgaaat ggatggtgaa aatcttgaag atcagcaaca acaacaacaa 2761 caacagcagc agcaaaacca tcatcatcag cagccgcaac aacagcagca tcataaccat 2821 catcagccat ctccccaaac tcatcaaact ctatcgcctg aagctcgcaa tgaacctcct 2881 gttgagggag ccgctgacat tattgagcct tctgtgcctg cacctagcgt aagtcaacct 2941 ttggagcaag cctccgatgc acatcatcat ccccatcagc cctcaaaaac caaggaatcg 3001 cataataata tttcttcgcc caatgatgac gatgacagcg atgagcgcct tctcaatgaa 3061 cgagccatgg accatagcac tgccggttct tcaaagtctc gcacgaaata tgacaatgaa 3121 cgctacgggg gtcgcgttag acgttccttg aatcgttatg cagcttatgc atctgacgaa 3181 tatgtgaata gcgatggtga tggtgactat tccagtgacc gcgaagaacg tgaacgtagg 3241 gaaagaaatg atcgtcgtcg taattatcgt gagggtagtg tacgcagtga tcgcggcgga 3301 gacgaagacg agagcaaacg taatcgccgt cagcaacgtg ataaacgtga caaatactat 3361 tacgaaggcg aggaacgccc aagggcaggc gaacgttcca agaccgactc cagacgttcc 3421 caacggcagc ggggctatga gaatgattca cgctatgaaa ccgaagagtc tacacgtttt 3481 gatgcgcgca aagaatcatc tcgccgcagc atgcgtcatt cggaggccgc ggagcgtaat 3541 cgtcgtggtg atcgcagtga tcaaggtggc gaatatgagg attatcctcg caaaggacaa 3601 ggctatcgtt cttctaagcg ttctggcgaa aactatgaat ctgatcgtag ggacagaaga 3661 cgcggcggcg atgactatga caatacaatc gaaagacggc gtcgcagcga taaacatcgt 3721 gaccgtgatc cccgttacaa tgatcctcgc tatgatccac gcgaatatga agaatatcgc 3781 aaacatagtt cgcgtaatgc tcgtgacagt gatttggaga aagaaggtgg cggcggtgga 3841 ggaccaccac gttctggcag aatgcatcat gatggccgtc atgctgctgc catgtatggt 3901 ggttaccctg gcggaggata ctatgatcca tataccgcct actactatca acaaatggca 3961 cgcaacaatc cccaagccta tgccgaatgg tataagaaat actatggcca acatgctgct 4021 gccgtgacag ctggttctac gcaggcaatg ccagccagcg cagacacctc attgaccgct 4081 gcagccaatg atggacgtga atcggtgcac tctggacgca gttcagctca taatgattta 4141 aaagataggt atacccatgc ctacataaca caagccaatg aatatcatcg ccattaccac 4201 catcaccaac aacaacaaca gcatcatcat caacaattgc aacaacatca tcaccaccaa 4261 caccatctcc aacaaatggc attcaatcag acacacaatt cgaccatgtt ggtggatgag 4321 gactcattga atcaaagcac tagtttatat agtggcattg gcggcggtgg tggcctttca 4381 caggcccatt cccaaacgaa tctttcgcaa attcatggcg gttactatgt aacgccctcg 4441 gtcctacaaa cagcagcagc agcaggagct catgcaacgc catctctcta ttatgcacgt 4501 tctgattatg cggaatcaag atctggtgct atatccgtgc gcgatccaga tcccatagca 4561 tcggagccac aacgtttaac accttgcaaa tttatcaatg agcatgcagt ggtgagtttt 4621 ggctcaggca ttttggtaac ggtcaaacca aaatacacac cacatggtca gatcagtaac 4681 atagtgaagc tgttgaagtt taagcccaat gatgagacca gaaaattatt caaagtcttc 4741 ccaggacctt tggtcagagg tttaacacac aagaaaacgg ttatagaatt ttgccaggag 4801 caaatacgtt tgggacccat ggagacaacc atatatgcca aacaattgat tagcaataat 4861 gcagagaaat atagggcctc ctatacctta atgtggaatc tattgatatt gctgttgaaa 4921 cagaatggga tggttgtggg cactgacatt gctgaattgc tattgaaaaa tcaacaacaa 4981 tttgcctatc aaacacccaa caattctatg aacaattctc taaaatctaa atcgggtagc 5041 acttcccctg tggcggagga caatgaggca atcaaagatg atgctgatat tgcaaataat 5101 gaagagtcta aagaagataa agaccaagag ttacgagaat cctcggaaga aaaaatgccc 5161 tcctccagct caaacgcttt gagtgaaaca gaaattaccg agaaatttag aaactatttg 5221 ttgtatggca atgtcaatga ggccttggaa tgggccaccg ataataattt gtggggtcat 5281 gcattattct tggcctctaa attggatcgt cgttcgcatg ccaatgttat gatgaagttt 5341 gccaataaat tggctttaaa tgaccctctg cagacgctct atcaattgat gagtggtcgt 5401 tcaccttcaa gtgtgacctg tgtacaggat gaaaaatggg gtgattggcg tcctcatcta 5461 tccatgattt tatcgaatac ttcacaaaaa ccagaattgg atcgtaaggc cattacgact 5521 ttgggtgatt ccctattcaa tcgtggcgat ttgtatgcag cccatttttg ttatctaatg 5581 gcgcaagttg gttttggacg ctatcaggag tcggcaacac aggagaatac attgcaacag 5641 catttgccaa aattggtttt gttgggctcc tctcactaca aacaattcca agagtttgct 5701 cacaacgaag cgattgtcat gactgaaatc tatgaatatg cctgttcctt gaatgatgat 5761 aaattttcaa ttgtagagtt tcagccttat aaattcattt tggccacacg tttattggac 5821 tatggtttcc atttgaagag tttaatgtat ttggaacaaa tttctgtaca cattgcacgg 5881 gatccaacga aatatgagag tagtttcatc aacaaggtct atgaaatggc agatcgtttg 5941 aagtactacg atccagtctt agaaaaaacc atagatgatc agcaacaact aggcaacgag 6001 gaaggagata atgccctaaa cacctcacaa caacaattgg aggaacaaaa atggttgcaa 6061 agtctaaggc aaatggctca acaatataaa attgattatg ctgtgccagc gaactcggct 6121 gtggacagtc agcagcaaca agtgatggat cccagttttg gttatcaaca acaacatata 6181 gatcaacaat ttatggaaat caataaacaa ttcagtgaat tgaatctgca atatcaagat 6241 cagcagcagc aacaaccaca accacaacaa cagccaacat tttacaatcc agacttaatg 6301 caacaacaac cgcagcaaac ccaaaatagc atgttggcca cggatgccca acaacaacca 6361 ttatctttgg atccctatca gacacaaaac gaaatgcctg ccatgcaggc caatgaacag 6421 caacagacat tagatgccaa ccaatcatca acaacggctc aaactgatgt ttatcatcag 6481 cagacggccg cctatatgca gcccgatatg acaagctatg gtcaaaatta ttatgatccc 6541 actcagcagc agcaaggact acaaaactac aataatgaag gcggccatat ggatgcaaca 6601 caaacgactg atagtggctc ttatgattat tgggctcaac agcaacaaca agttactaca 6661 gcacagcctt acggcttgga tgagcagcat gaatcacctc ctcatgcaca aacccaagct 6721 ttggaaggcc aaaagtcagc tgccaccccc aaaaacagca ccaacaacag ccaaggggag 6781 gcggtaaggg cagcagctgc aacacctaaa gccactttac ttttgaataa taaaaaatcc 6841 caattgaaaa tgaaaactaa ccataatatg atgatgcatg cctcacccgg tcatttgagt 6901 tcccaatata ataaggccaa attggaaaag gtctcgaaat taacaacgac gatattggcc 6961 aacaccaaca gctctaaaac taatttccct gttaagaaat ccccagaggt gtcaaccaaa 7021 caagcattta ataaattatt agaatatgaa acctcctcaa ccccctccaa cacacagacc 7081 accttggcag caacagcaac gactacaact cctttttcca taaacaatcc cacagccaga 7141 aagaaacccc ctacttaagc caggctacaa gtttaacagc gacagctagc gctaactcta 7201 agacttcctt aaaatttcct caaaaagctt ataataccac tactactact actactactc 7261 agcatcacaa tacaatttta aa