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LOCUS XM_013249472 7667 bp mRNA linear INV 02-SEP-2023 (LOC106085249), transcript variant X9, mRNA. ACCESSION XM_013249472 VERSION XM_013249472.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249472.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7667 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7667 /gene="LOC106085249" /note="uncharacterized LOC106085249; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085249" CDS 216..7613 /gene="LOC106085249" /codon_start=1 /product="uncharacterized protein LOC106085249 isoform X8" /protein_id="XP_013104926.2" /db_xref="GeneID:106085249" /translation="MMPQMQPPLPTVGATNAGANNNWQSGQQNYQSSNMMYQQHAGGV APQQHQQHQQQQWPQQNSAVNQQMYDNSFNHQQQQVSNNAYQQQQQQQAAAASYFQQA AAPQPQQQQQPLQTSLTNMSQTTTTNAVNFFDNANNNNNNNQSTGDGWGDWDWNDNST IEANESAIQHQQQQQQQQISTQMHHPPQSQQQTQPPPPTAVAAPPPLPAVANDHNQAF NSSNIIADSFNQQSNDTWNWNATNAAVENVPAHVENKTALAKVEQQHNDNWNWTTTNE EDTQPQQQQQQQQTVVTNDHASNDNWNWSSNETNQQQIAQTTSTVQDIKQAVQPASKS VEAAAIMPLAPPPTEFSSSAVSENHNYNTNAAPQTSTSTNIPNTVFVSQAKPVTLPSR QYASPPMGNTPVSENPPTEGTALMPPQAFQNAEEAAVSRPTNLQSPALPPPTTTVPPP AGLPPAATAAAAGNPFKRSGLAQHHRATALMPTMPQASPAVFNMPPPPPADFANPSSS SNVTLMEPENNEIPSQENQEILAPPAAIMQPSLQPPTSTISLPNAATVAQPPNDERNQ YLQTSHLSENSEDQQPEADGLLPPPGLSRLVLGEPELEASQRMVMGTDAPVLGSNATV ADVMHLEERHADGEDTASENAVPVISGAMGGVGGQGSPPSTSDRNLYLVPGESNVNNQ QRVVTGVELQEQREIEMDGENLEDQQQQQQQQQQQNHHHQQPQQQQHHNHHQPSPQTH QTLSPEARNEPPVEGAADIIEPSVPAPSVSQPLEQASDAHHHPHQPSKTKESHNNISS PNDDDDSDERLLNERAMDHSTAGSSKSRTKYDNERYGGRVRRSLNRYAAYASDEYVNS DGDGDYSSDREERERRERNDRRRNYREGSVRSDRGGDEDESKRNRRQQRDKRDKYYYE GEERPRAGERSKTDSRRSQRQRGYENDSRYETEESTRFDARKESSRRSMRHSEAAERN RRGDRSDQGGEYEDYPRKGQGYRSSKRSGENYESDRRDRRRGGDDYDNTIERRRRSDK HRDRDPRYNDPRYDPREYEEYRKHSSRNARDSDLEKEGGGGGGPPRSGRMHHDGRHAA AMYGGYPGGGYYDPYTAYYYQQMARNNPQAYAEWYKKYYGQHAAAVTAGSTQAMPASA DTSLTAAANDGRESVHSGRSSAHNDLKDRYTHAYITQANEYHRHYHHHQQQQQHHHQQ LQQHHHHQHHLQQMAFNQTHNSTMLVDEDSLNQSTSLYSGIGGGGGLSQAHSQTNLSQ IHGGYYVTPSVLQTAAAAGAHATPSLYYARSDYAESRSGAISVRDPDPIASEPQRLTP CKFINEHAVVSFGSGILVTVKPKYTPHGQISNIVKLLKFKPNDETRKLFKVFPGPLVR GLTHKKTVIEFCQEQIRLGPMETTIYAKQLISNNAEKYRASYTLMWNLLILLLKQNGM VVGTDIAELLLKNQQQFAYQTPNNSMNNSLKSKSGSTSPVAEDNEAIKDDADIANNEE SKEDKDQELRESSEEKMPSSSSNALSETEITEKFRNYLLYGNVNEALEWATDNNLWGH ALFLASKLDRRSHANVMMKFANKLALNDPLQTLYQLMSGRSPSSVTCVQDEKWGDWRP HLSMILSNTSQKPELDRKAITTLGDSLFNRGDLYAAHFCYLMAQVGFGRYQESATQEN TLQQHLPKLVLLGSSHYKQFQEFAHNEAIVMTEIYEYACSLNDDKFSIVEFQPYKFIL ATRLLDYGFHLKSLMYLEQISVHIARDPTKYESSFINKVYEMADRLKYYDPVLEKTID DQQQLGNEEGDNALNTSQQQLEEQKWLQSLRQMAQQYKIDYAVPANSAVDSQQQQVMD PSFGYQQQHIDQQFMEINKQFSELNLQYQDQQQQQPQPQQQPTFYNPDLMQQQPQQTQ NSMLATDAQQQPLSLDPYQTQNEMPAMQANEQQQTLDANQSSTTAQTDVYHQQTAAYM QPDMTSYGQNYYDPTQQQQGLQNYNNEGGHMDATQTTDSGSYDYWAQQQQQVTTAQPY GLDEQHESPPHAQTQALEGQKSAATPKNSTNNSQGEAVRAAAATPKATLLLNNKKSQL KMKTNHNMMMHASPGHLSSQYNKAKLEKVSKLTTTILANTNSSKTNFPVKKSPEVSTK QAFNKLLEYETSSTPSNTQTTLAATATTTTPFSINNNARPTISMPKSKTYDTDDESSG KKQQAIGGGQKSTTGSEGKIMQQQTAQKNKENKNNAAGNQNSGWFGGIWNKFSLKPKN QMILPDDKNPSIVWDPEKKKWVNTDGDEQEEESFKPPPKMGDMMMMSQANLAPPQSQP QQNQMPSFMDPQQQQQQQYVPTSLPNSASSPNPMQQQQQQQTSAQSNVTAATNPNAPG PTKTPTLQSNMFKMQRNRTLKNAYVDVFNPSGAPVNKAAENVLAPALPPAAVPQSGFF IPGGSGSTAGGVSQDNNGYQQQQQPQDTPQFYNPNQYGTGTGY" polyA_site 7667 /gene="LOC106085249" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgttttattt gttagctaat aagcttttta aagtcatgaa ccaattgagt atttagtttt 61 ggagctacat tgaaaaaaaa gcttacaata atgtacggga cacgacgatt ttgggtttta 121 tggtactact attaaccatg acttgaacca gatatttaaa gaattcgtgg caaacacatt 181 ctgtaacttc acaaaattat ttgccaacat caaaaatgat gccacaaatg caacctccat 241 tgccaacagt gggagcaaca aatgctgggg caaataacaa ttggcaaagt ggacagcaaa 301 attatcagag cagtaatatg atgtatcaac agcatgcagg tggtgtagcg ccacaacaac 361 accagcaaca tcaacagcaa caatggccgc agcaaaattc ggctgtcaat cagcagatgt 421 atgataattc attcaatcat cagcagcaac aggtcagcaa taatgcgtat caacaacaac 481 aacagcaaca agcagctgca gcctcatatt ttcaacaagc tgcagcacca caaccccaac 541 aacagcaaca accactacaa acatcattaa ccaacatgtc acaaacaaca acaacaaatg 601 cagtcaattt ctttgacaat gccaataata acaacaacaa caaccaatct accggtgatg 661 gttggggtga ttgggattgg aatgataact ctactataga agccaatgag agcgctattc 721 aacatcagca gcagcagcag cagcagcaaa tctctactca aatgcatcat ccaccacaat 781 cacagcaaca aactcaacca ccacccccaa cagcagtagc cgcaccacca ccactacctg 841 ctgttgctaa cgaccacaat caggcattta attcttctaa cattattgct gatagtttta 901 atcagcaatc aaatgatact tggaattgga atgctaccaa tgctgcagtt gagaatgtgc 961 cagctcatgt tgagaataaa acggcactgg caaaggtaga gcagcagcat aatgacaatt 1021 ggaattggac aaccacgaac gaggaggaca ctcagcctca gcagcaacaa caacaacaac 1081 aaacagttgt tacgaacgat cacgccagca acgataattg gaattggtca tcgaacgaaa 1141 cgaatcagca acaaattgca caaacaacat ctacggtgca ggatatcaag caagctgttc 1201 agccagcttc aaaatctgta gaagccgccg ccatcatgcc cttagcacca cctccaacgg 1261 aattttcttc gagtgctgta tcggaaaatc acaactataa cacaaatgca gcacctcaaa 1321 catcgacatc aactaacatt ccaaacacag tatttgtgtc gcaagccaaa ccggtgacct 1381 tgccctctcg gcaatatgcc tcgcctccca tgggcaatac tccggtcagt gaaaaccctc 1441 ccacagaggg tactgcatta atgcctcccc aggccttcca aaatgccgag gaggcagctg 1501 ttagcagacc aactaatttg caatcacctg ctttgccgcc accaacaacc actgttcctc 1561 cacccgccgg tttgcctcct gcagcaacag cggctgcagc tggaaatcca tttaaacgtt 1621 cgggtttggc tcaacatcat cgtgctactg ctttaatgcc cactatgcca caagctagtc 1681 ctgctgtttt taatatgccg ccgccaccgc cagcagattt tgcgaatccc tcatcatcgt 1741 ccaatgtaac actgatggag cccgaaaaca atgaaattcc ctcacaagaa aatcaagaaa 1801 ttttggctcc ccctgcagcc ataatgcaac cgtcattgca accaccaacc tccaccatta 1861 gtttgccaaa tgctgctaca gtggcacagc ctcctaatga tgaacgcaat caatatctgc 1921 agaccagtca tctatcggaa aattccgaag atcaacagcc tgaagcggat ggccttttac 1981 cacctccagg tttatcgcgt ttggttttgg gcgaaccaga attggaggcc tcacaaagga 2041 tggttatggg tactgatgcg cctgtgctgg gtagtaatgc caccgtggca gatgttatgc 2101 atttggaaga gcgtcatgca gatggcgagg atacagcttc agaaaatgca gtgcctgtta 2161 taagtggtgc gatgggtggt gttggcggac aaggttctcc cccctccaca tccgatcgta 2221 atctgtattt ggtccctggc gaaagcaatg tcaataacca acaacgagtt gtcactggag 2281 tggagttgca agagcaaaga gaaatcgaaa tggatggtga aaatcttgaa gatcagcaac 2341 aacaacaaca acaacagcag cagcaaaacc atcatcatca gcagccgcaa caacagcagc 2401 atcataacca tcatcagcca tctccccaaa ctcatcaaac tctatcgcct gaagctcgca 2461 atgaacctcc tgttgaggga gccgctgaca ttattgagcc ttctgtgcct gcacctagcg 2521 taagtcaacc tttggagcaa gcctccgatg cacatcatca tccccatcag ccctcaaaaa 2581 ccaaggaatc gcataataat atttcttcgc ccaatgatga cgatgacagc gatgagcgcc 2641 ttctcaatga acgagccatg gaccatagca ctgccggttc ttcaaagtct cgcacgaaat 2701 atgacaatga acgctacggg ggtcgcgtta gacgttcctt gaatcgttat gcagcttatg 2761 catctgacga atatgtgaat agcgatggtg atggtgacta ttccagtgac cgcgaagaac 2821 gtgaacgtag ggaaagaaat gatcgtcgtc gtaattatcg tgagggtagt gtacgcagtg 2881 atcgcggcgg agacgaagac gagagcaaac gtaatcgccg tcagcaacgt gataaacgtg 2941 acaaatacta ttacgaaggc gaggaacgcc caagggcagg cgaacgttcc aagaccgact 3001 ccagacgttc ccaacggcag cggggctatg agaatgattc acgctatgaa accgaagagt 3061 ctacacgttt tgatgcgcgc aaagaatcat ctcgccgcag catgcgtcat tcggaggccg 3121 cggagcgtaa tcgtcgtggt gatcgcagtg atcaaggtgg cgaatatgag gattatcctc 3181 gcaaaggaca aggctatcgt tcttctaagc gttctggcga aaactatgaa tctgatcgta 3241 gggacagaag acgcggcggc gatgactatg acaatacaat cgaaagacgg cgtcgcagcg 3301 ataaacatcg tgaccgtgat ccccgttaca atgatcctcg ctatgatcca cgcgaatatg 3361 aagaatatcg caaacatagt tcgcgtaatg ctcgtgacag tgatttggag aaagaaggtg 3421 gcggcggtgg aggaccacca cgttctggca gaatgcatca tgatggccgt catgctgctg 3481 ccatgtatgg tggttaccct ggcggaggat actatgatcc atataccgcc tactactatc 3541 aacaaatggc acgcaacaat ccccaagcct atgccgaatg gtataagaaa tactatggcc 3601 aacatgctgc tgccgtgaca gctggttcta cgcaggcaat gccagccagc gcagacacct 3661 cattgaccgc tgcagccaat gatggacgtg aatcggtgca ctctggacgc agttcagctc 3721 ataatgattt aaaagatagg tatacccatg cctacataac acaagccaat gaatatcatc 3781 gccattacca ccatcaccaa caacaacaac agcatcatca tcaacaattg caacaacatc 3841 atcaccacca acaccatctc caacaaatgg cattcaatca gacacacaat tcgaccatgt 3901 tggtggatga ggactcattg aatcaaagca ctagtttata tagtggcatt ggcggcggtg 3961 gtggcctttc acaggcccat tcccaaacga atctttcgca aattcatggc ggttactatg 4021 taacgccctc ggtcctacaa acagcagcag cagcaggagc tcatgcaacg ccatctctct 4081 attatgcacg ttctgattat gcggaatcaa gatctggtgc tatatccgtg cgcgatccag 4141 atcccatagc atcggagcca caacgtttaa caccttgcaa atttatcaat gagcatgcag 4201 tggtgagttt tggctcaggc attttggtaa cggtcaaacc aaaatacaca ccacatggtc 4261 agatcagtaa catagtgaag ctgttgaagt ttaagcccaa tgatgagacc agaaaattat 4321 tcaaagtctt cccaggacct ttggtcagag gtttaacaca caagaaaacg gttatagaat 4381 tttgccagga gcaaatacgt ttgggaccca tggagacaac catatatgcc aaacaattga 4441 ttagcaataa tgcagagaaa tatagggcct cctatacctt aatgtggaat ctattgatat 4501 tgctgttgaa acagaatggg atggttgtgg gcactgacat tgctgaattg ctattgaaaa 4561 atcaacaaca atttgcctat caaacaccca acaattctat gaacaattct ctaaaatcta 4621 aatcgggtag cacttcccct gtggcggagg acaatgaggc aatcaaagat gatgctgata 4681 ttgcaaataa tgaagagtct aaagaagata aagaccaaga gttacgagaa tcctcggaag 4741 aaaaaatgcc ctcctccagc tcaaacgctt tgagtgaaac agaaattacc gagaaattta 4801 gaaactattt gttgtatggc aatgtcaatg aggccttgga atgggccacc gataataatt 4861 tgtggggtca tgcattattc ttggcctcta aattggatcg tcgttcgcat gccaatgtta 4921 tgatgaagtt tgccaataaa ttggctttaa atgaccctct gcagacgctc tatcaattga 4981 tgagtggtcg ttcaccttca agtgtgacct gtgtacagga tgaaaaatgg ggtgattggc 5041 gtcctcatct atccatgatt ttatcgaata cttcacaaaa accagaattg gatcgtaagg 5101 ccattacgac tttgggtgat tccctattca atcgtggcga tttgtatgca gcccattttt 5161 gttatctaat ggcgcaagtt ggttttggac gctatcagga gtcggcaaca caggagaata 5221 cattgcaaca gcatttgcca aaattggttt tgttgggctc ctctcactac aaacaattcc 5281 aagagtttgc tcacaacgaa gcgattgtca tgactgaaat ctatgaatat gcctgttcct 5341 tgaatgatga taaattttca attgtagagt ttcagcctta taaattcatt ttggccacac 5401 gtttattgga ctatggtttc catttgaaga gtttaatgta tttggaacaa atttctgtac 5461 acattgcacg ggatccaacg aaatatgaga gtagtttcat caacaaggtc tatgaaatgg 5521 cagatcgttt gaagtactac gatccagtct tagaaaaaac catagatgat cagcaacaac 5581 taggcaacga ggaaggagat aatgccctaa acacctcaca acaacaattg gaggaacaaa 5641 aatggttgca aagtctaagg caaatggctc aacaatataa aattgattat gctgtgccag 5701 cgaactcggc tgtggacagt cagcagcaac aagtgatgga tcccagtttt ggttatcaac 5761 aacaacatat agatcaacaa tttatggaaa tcaataaaca attcagtgaa ttgaatctgc 5821 aatatcaaga tcagcagcag caacaaccac aaccacaaca acagccaaca ttttacaatc 5881 cagacttaat gcaacaacaa ccgcagcaaa cccaaaatag catgttggcc acggatgccc 5941 aacaacaacc attatctttg gatccctatc agacacaaaa cgaaatgcct gccatgcagg 6001 ccaatgaaca gcaacagaca ttagatgcca accaatcatc aacaacggct caaactgatg 6061 tttatcatca gcagacggcc gcctatatgc agcccgatat gacaagctat ggtcaaaatt 6121 attatgatcc cactcagcag cagcaaggac tacaaaacta caataatgaa ggcggccata 6181 tggatgcaac acaaacgact gatagtggct cttatgatta ttgggctcaa cagcaacaac 6241 aagttactac agcacagcct tacggcttgg atgagcagca tgaatcacct cctcatgcac 6301 aaacccaagc tttggaaggc caaaagtcag ctgccacccc caaaaacagc accaacaaca 6361 gccaagggga ggcggtaagg gcagcagctg caacacctaa agccacttta cttttgaata 6421 ataaaaaatc ccaattgaaa atgaaaacta accataatat gatgatgcat gcctcacccg 6481 gtcatttgag ttcccaatat aataaggcca aattggaaaa ggtctcgaaa ttaacaacga 6541 cgatattggc caacaccaac agctctaaaa ctaatttccc tgttaagaaa tccccagagg 6601 tgtcaaccaa acaagcattt aataaattat tagaatatga aacctcctca accccctcca 6661 acacacagac caccttggca gcaacagcaa cgactacaac tcctttttcc ataaacaata 6721 atgcaagacc aacaatatcg atgccaaaat ccaaaaccta cgatacagat gatgaaagtt 6781 cgggcaaaaa gcagcaagca attggtgggg gccaaaaatc aacaacgggc agtgaaggta 6841 aaataatgca acaacaaaca gcgcaaaaga ataaggaaaa taaaaataat gctgctggaa 6901 accaaaattc tggctggttt ggtggcattt ggaataagtt ttccttgaaa cccaaaaatc 6961 aaatgatttt gcctgatgat aagaatccct ctattgtctg ggatcctgag aaaaagaaat 7021 gggtcaacac tgatggtgat gagcaagagg aggaatcgtt taagcctcct cccaaaatgg 7081 gtgatatgat gatgatgtca caagcaaatc ttgcgccacc acaaagtcaa cctcaacaga 7141 atcaaatgcc aagcttcatg gatcctcaac aacaacagca gcaacaatat gtgcctacat 7201 ccctacctaa ttcagcgtca tcaccgaatc ccatgcaaca acaacaacaa cagcaaacat 7261 cagcacaatc caatgtgacg gcggcgacga atccaaatgc cccaggacct acgaaaactc 7321 ccacattaca gtcaaatatg tttaaaatgc aaagaaatcg aactttaaaa aacgcttacg 7381 ttgacgtttt taatccctct ggtgctcctg taaataaggc tgctgaaaat gttctcgctc 7441 ctgctttacc tcctgccgca gtgcctcaaa gtggattttt cataccaggc ggctcagggt 7501 caacagctgg tggtgttagt caagataata atggctatca gcagcaacaa caaccacaag 7561 atacgccaca gttttacaat cccaatcaat atgggaccgg tactggttat taaaacaaag 7621 gagttttata acattttgtt tgtttgttaa agactctgat ttttttt