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LOCUS XM_013249463 7696 bp mRNA linear INV 02-SEP-2023 (LOC106085249), transcript variant X8, mRNA. ACCESSION XM_013249463 VERSION XM_013249463.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249463.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7696 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7696 /gene="LOC106085249" /note="uncharacterized LOC106085249; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085249" CDS 245..7642 /gene="LOC106085249" /codon_start=1 /product="uncharacterized protein LOC106085249 isoform X8" /protein_id="XP_013104917.2" /db_xref="GeneID:106085249" /translation="MMPQMQPPLPTVGATNAGANNNWQSGQQNYQSSNMMYQQHAGGV APQQHQQHQQQQWPQQNSAVNQQMYDNSFNHQQQQVSNNAYQQQQQQQAAAASYFQQA AAPQPQQQQQPLQTSLTNMSQTTTTNAVNFFDNANNNNNNNQSTGDGWGDWDWNDNST IEANESAIQHQQQQQQQQISTQMHHPPQSQQQTQPPPPTAVAAPPPLPAVANDHNQAF NSSNIIADSFNQQSNDTWNWNATNAAVENVPAHVENKTALAKVEQQHNDNWNWTTTNE EDTQPQQQQQQQQTVVTNDHASNDNWNWSSNETNQQQIAQTTSTVQDIKQAVQPASKS VEAAAIMPLAPPPTEFSSSAVSENHNYNTNAAPQTSTSTNIPNTVFVSQAKPVTLPSR QYASPPMGNTPVSENPPTEGTALMPPQAFQNAEEAAVSRPTNLQSPALPPPTTTVPPP AGLPPAATAAAAGNPFKRSGLAQHHRATALMPTMPQASPAVFNMPPPPPADFANPSSS SNVTLMEPENNEIPSQENQEILAPPAAIMQPSLQPPTSTISLPNAATVAQPPNDERNQ YLQTSHLSENSEDQQPEADGLLPPPGLSRLVLGEPELEASQRMVMGTDAPVLGSNATV ADVMHLEERHADGEDTASENAVPVISGAMGGVGGQGSPPSTSDRNLYLVPGESNVNNQ QRVVTGVELQEQREIEMDGENLEDQQQQQQQQQQQNHHHQQPQQQQHHNHHQPSPQTH QTLSPEARNEPPVEGAADIIEPSVPAPSVSQPLEQASDAHHHPHQPSKTKESHNNISS PNDDDDSDERLLNERAMDHSTAGSSKSRTKYDNERYGGRVRRSLNRYAAYASDEYVNS DGDGDYSSDREERERRERNDRRRNYREGSVRSDRGGDEDESKRNRRQQRDKRDKYYYE GEERPRAGERSKTDSRRSQRQRGYENDSRYETEESTRFDARKESSRRSMRHSEAAERN RRGDRSDQGGEYEDYPRKGQGYRSSKRSGENYESDRRDRRRGGDDYDNTIERRRRSDK HRDRDPRYNDPRYDPREYEEYRKHSSRNARDSDLEKEGGGGGGPPRSGRMHHDGRHAA AMYGGYPGGGYYDPYTAYYYQQMARNNPQAYAEWYKKYYGQHAAAVTAGSTQAMPASA DTSLTAAANDGRESVHSGRSSAHNDLKDRYTHAYITQANEYHRHYHHHQQQQQHHHQQ LQQHHHHQHHLQQMAFNQTHNSTMLVDEDSLNQSTSLYSGIGGGGGLSQAHSQTNLSQ IHGGYYVTPSVLQTAAAAGAHATPSLYYARSDYAESRSGAISVRDPDPIASEPQRLTP CKFINEHAVVSFGSGILVTVKPKYTPHGQISNIVKLLKFKPNDETRKLFKVFPGPLVR GLTHKKTVIEFCQEQIRLGPMETTIYAKQLISNNAEKYRASYTLMWNLLILLLKQNGM VVGTDIAELLLKNQQQFAYQTPNNSMNNSLKSKSGSTSPVAEDNEAIKDDADIANNEE SKEDKDQELRESSEEKMPSSSSNALSETEITEKFRNYLLYGNVNEALEWATDNNLWGH ALFLASKLDRRSHANVMMKFANKLALNDPLQTLYQLMSGRSPSSVTCVQDEKWGDWRP HLSMILSNTSQKPELDRKAITTLGDSLFNRGDLYAAHFCYLMAQVGFGRYQESATQEN TLQQHLPKLVLLGSSHYKQFQEFAHNEAIVMTEIYEYACSLNDDKFSIVEFQPYKFIL ATRLLDYGFHLKSLMYLEQISVHIARDPTKYESSFINKVYEMADRLKYYDPVLEKTID DQQQLGNEEGDNALNTSQQQLEEQKWLQSLRQMAQQYKIDYAVPANSAVDSQQQQVMD PSFGYQQQHIDQQFMEINKQFSELNLQYQDQQQQQPQPQQQPTFYNPDLMQQQPQQTQ NSMLATDAQQQPLSLDPYQTQNEMPAMQANEQQQTLDANQSSTTAQTDVYHQQTAAYM QPDMTSYGQNYYDPTQQQQGLQNYNNEGGHMDATQTTDSGSYDYWAQQQQQVTTAQPY GLDEQHESPPHAQTQALEGQKSAATPKNSTNNSQGEAVRAAAATPKATLLLNNKKSQL KMKTNHNMMMHASPGHLSSQYNKAKLEKVSKLTTTILANTNSSKTNFPVKKSPEVSTK QAFNKLLEYETSSTPSNTQTTLAATATTTTPFSINNNARPTISMPKSKTYDTDDESSG KKQQAIGGGQKSTTGSEGKIMQQQTAQKNKENKNNAAGNQNSGWFGGIWNKFSLKPKN QMILPDDKNPSIVWDPEKKKWVNTDGDEQEEESFKPPPKMGDMMMMSQANLAPPQSQP QQNQMPSFMDPQQQQQQQYVPTSLPNSASSPNPMQQQQQQQTSAQSNVTAATNPNAPG PTKTPTLQSNMFKMQRNRTLKNAYVDVFNPSGAPVNKAAENVLAPALPPAAVPQSGFF IPGGSGSTAGGVSQDNNGYQQQQQPQDTPQFYNPNQYGTGTGY" polyA_site 7696 /gene="LOC106085249" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttagttgcct gttcgcaaag agagctaaag ttttttttta aagtttttac ctgcaaatta 61 actggaatat tgtcgaaatt cttaacaaaa tttagcaaaa acaaaaagaa taatgtgtat 121 gctttcgaaa ttgctaaaaa ttccataaaa taaaagtgtt tataagcaga aaaacgtaaa 181 aaaatcaaag aattcgtggc aaacacattc tgtaacttca caaaattatt tgccaacatc 241 aaaaatgatg ccacaaatgc aacctccatt gccaacagtg ggagcaacaa atgctggggc 301 aaataacaat tggcaaagtg gacagcaaaa ttatcagagc agtaatatga tgtatcaaca 361 gcatgcaggt ggtgtagcgc cacaacaaca ccagcaacat caacagcaac aatggccgca 421 gcaaaattcg gctgtcaatc agcagatgta tgataattca ttcaatcatc agcagcaaca 481 ggtcagcaat aatgcgtatc aacaacaaca acagcaacaa gcagctgcag cctcatattt 541 tcaacaagct gcagcaccac aaccccaaca acagcaacaa ccactacaaa catcattaac 601 caacatgtca caaacaacaa caacaaatgc agtcaatttc tttgacaatg ccaataataa 661 caacaacaac aaccaatcta ccggtgatgg ttggggtgat tgggattgga atgataactc 721 tactatagaa gccaatgaga gcgctattca acatcagcag cagcagcagc agcagcaaat 781 ctctactcaa atgcatcatc caccacaatc acagcaacaa actcaaccac cacccccaac 841 agcagtagcc gcaccaccac cactacctgc tgttgctaac gaccacaatc aggcatttaa 901 ttcttctaac attattgctg atagttttaa tcagcaatca aatgatactt ggaattggaa 961 tgctaccaat gctgcagttg agaatgtgcc agctcatgtt gagaataaaa cggcactggc 1021 aaaggtagag cagcagcata atgacaattg gaattggaca accacgaacg aggaggacac 1081 tcagcctcag cagcaacaac aacaacaaca aacagttgtt acgaacgatc acgccagcaa 1141 cgataattgg aattggtcat cgaacgaaac gaatcagcaa caaattgcac aaacaacatc 1201 tacggtgcag gatatcaagc aagctgttca gccagcttca aaatctgtag aagccgccgc 1261 catcatgccc ttagcaccac ctccaacgga attttcttcg agtgctgtat cggaaaatca 1321 caactataac acaaatgcag cacctcaaac atcgacatca actaacattc caaacacagt 1381 atttgtgtcg caagccaaac cggtgacctt gccctctcgg caatatgcct cgcctcccat 1441 gggcaatact ccggtcagtg aaaaccctcc cacagagggt actgcattaa tgcctcccca 1501 ggccttccaa aatgccgagg aggcagctgt tagcagacca actaatttgc aatcacctgc 1561 tttgccgcca ccaacaacca ctgttcctcc acccgccggt ttgcctcctg cagcaacagc 1621 ggctgcagct ggaaatccat ttaaacgttc gggtttggct caacatcatc gtgctactgc 1681 tttaatgccc actatgccac aagctagtcc tgctgttttt aatatgccgc cgccaccgcc 1741 agcagatttt gcgaatccct catcatcgtc caatgtaaca ctgatggagc ccgaaaacaa 1801 tgaaattccc tcacaagaaa atcaagaaat tttggctccc cctgcagcca taatgcaacc 1861 gtcattgcaa ccaccaacct ccaccattag tttgccaaat gctgctacag tggcacagcc 1921 tcctaatgat gaacgcaatc aatatctgca gaccagtcat ctatcggaaa attccgaaga 1981 tcaacagcct gaagcggatg gccttttacc acctccaggt ttatcgcgtt tggttttggg 2041 cgaaccagaa ttggaggcct cacaaaggat ggttatgggt actgatgcgc ctgtgctggg 2101 tagtaatgcc accgtggcag atgttatgca tttggaagag cgtcatgcag atggcgagga 2161 tacagcttca gaaaatgcag tgcctgttat aagtggtgcg atgggtggtg ttggcggaca 2221 aggttctccc ccctccacat ccgatcgtaa tctgtatttg gtccctggcg aaagcaatgt 2281 caataaccaa caacgagttg tcactggagt ggagttgcaa gagcaaagag aaatcgaaat 2341 ggatggtgaa aatcttgaag atcagcaaca acaacaacaa caacagcagc agcaaaacca 2401 tcatcatcag cagccgcaac aacagcagca tcataaccat catcagccat ctccccaaac 2461 tcatcaaact ctatcgcctg aagctcgcaa tgaacctcct gttgagggag ccgctgacat 2521 tattgagcct tctgtgcctg cacctagcgt aagtcaacct ttggagcaag cctccgatgc 2581 acatcatcat ccccatcagc cctcaaaaac caaggaatcg cataataata tttcttcgcc 2641 caatgatgac gatgacagcg atgagcgcct tctcaatgaa cgagccatgg accatagcac 2701 tgccggttct tcaaagtctc gcacgaaata tgacaatgaa cgctacgggg gtcgcgttag 2761 acgttccttg aatcgttatg cagcttatgc atctgacgaa tatgtgaata gcgatggtga 2821 tggtgactat tccagtgacc gcgaagaacg tgaacgtagg gaaagaaatg atcgtcgtcg 2881 taattatcgt gagggtagtg tacgcagtga tcgcggcgga gacgaagacg agagcaaacg 2941 taatcgccgt cagcaacgtg ataaacgtga caaatactat tacgaaggcg aggaacgccc 3001 aagggcaggc gaacgttcca agaccgactc cagacgttcc caacggcagc ggggctatga 3061 gaatgattca cgctatgaaa ccgaagagtc tacacgtttt gatgcgcgca aagaatcatc 3121 tcgccgcagc atgcgtcatt cggaggccgc ggagcgtaat cgtcgtggtg atcgcagtga 3181 tcaaggtggc gaatatgagg attatcctcg caaaggacaa ggctatcgtt cttctaagcg 3241 ttctggcgaa aactatgaat ctgatcgtag ggacagaaga cgcggcggcg atgactatga 3301 caatacaatc gaaagacggc gtcgcagcga taaacatcgt gaccgtgatc cccgttacaa 3361 tgatcctcgc tatgatccac gcgaatatga agaatatcgc aaacatagtt cgcgtaatgc 3421 tcgtgacagt gatttggaga aagaaggtgg cggcggtgga ggaccaccac gttctggcag 3481 aatgcatcat gatggccgtc atgctgctgc catgtatggt ggttaccctg gcggaggata 3541 ctatgatcca tataccgcct actactatca acaaatggca cgcaacaatc cccaagccta 3601 tgccgaatgg tataagaaat actatggcca acatgctgct gccgtgacag ctggttctac 3661 gcaggcaatg ccagccagcg cagacacctc attgaccgct gcagccaatg atggacgtga 3721 atcggtgcac tctggacgca gttcagctca taatgattta aaagataggt atacccatgc 3781 ctacataaca caagccaatg aatatcatcg ccattaccac catcaccaac aacaacaaca 3841 gcatcatcat caacaattgc aacaacatca tcaccaccaa caccatctcc aacaaatggc 3901 attcaatcag acacacaatt cgaccatgtt ggtggatgag gactcattga atcaaagcac 3961 tagtttatat agtggcattg gcggcggtgg tggcctttca caggcccatt cccaaacgaa 4021 tctttcgcaa attcatggcg gttactatgt aacgccctcg gtcctacaaa cagcagcagc 4081 agcaggagct catgcaacgc catctctcta ttatgcacgt tctgattatg cggaatcaag 4141 atctggtgct atatccgtgc gcgatccaga tcccatagca tcggagccac aacgtttaac 4201 accttgcaaa tttatcaatg agcatgcagt ggtgagtttt ggctcaggca ttttggtaac 4261 ggtcaaacca aaatacacac cacatggtca gatcagtaac atagtgaagc tgttgaagtt 4321 taagcccaat gatgagacca gaaaattatt caaagtcttc ccaggacctt tggtcagagg 4381 tttaacacac aagaaaacgg ttatagaatt ttgccaggag caaatacgtt tgggacccat 4441 ggagacaacc atatatgcca aacaattgat tagcaataat gcagagaaat atagggcctc 4501 ctatacctta atgtggaatc tattgatatt gctgttgaaa cagaatggga tggttgtggg 4561 cactgacatt gctgaattgc tattgaaaaa tcaacaacaa tttgcctatc aaacacccaa 4621 caattctatg aacaattctc taaaatctaa atcgggtagc acttcccctg tggcggagga 4681 caatgaggca atcaaagatg atgctgatat tgcaaataat gaagagtcta aagaagataa 4741 agaccaagag ttacgagaat cctcggaaga aaaaatgccc tcctccagct caaacgcttt 4801 gagtgaaaca gaaattaccg agaaatttag aaactatttg ttgtatggca atgtcaatga 4861 ggccttggaa tgggccaccg ataataattt gtggggtcat gcattattct tggcctctaa 4921 attggatcgt cgttcgcatg ccaatgttat gatgaagttt gccaataaat tggctttaaa 4981 tgaccctctg cagacgctct atcaattgat gagtggtcgt tcaccttcaa gtgtgacctg 5041 tgtacaggat gaaaaatggg gtgattggcg tcctcatcta tccatgattt tatcgaatac 5101 ttcacaaaaa ccagaattgg atcgtaaggc cattacgact ttgggtgatt ccctattcaa 5161 tcgtggcgat ttgtatgcag cccatttttg ttatctaatg gcgcaagttg gttttggacg 5221 ctatcaggag tcggcaacac aggagaatac attgcaacag catttgccaa aattggtttt 5281 gttgggctcc tctcactaca aacaattcca agagtttgct cacaacgaag cgattgtcat 5341 gactgaaatc tatgaatatg cctgttcctt gaatgatgat aaattttcaa ttgtagagtt 5401 tcagccttat aaattcattt tggccacacg tttattggac tatggtttcc atttgaagag 5461 tttaatgtat ttggaacaaa tttctgtaca cattgcacgg gatccaacga aatatgagag 5521 tagtttcatc aacaaggtct atgaaatggc agatcgtttg aagtactacg atccagtctt 5581 agaaaaaacc atagatgatc agcaacaact aggcaacgag gaaggagata atgccctaaa 5641 cacctcacaa caacaattgg aggaacaaaa atggttgcaa agtctaaggc aaatggctca 5701 acaatataaa attgattatg ctgtgccagc gaactcggct gtggacagtc agcagcaaca 5761 agtgatggat cccagttttg gttatcaaca acaacatata gatcaacaat ttatggaaat 5821 caataaacaa ttcagtgaat tgaatctgca atatcaagat cagcagcagc aacaaccaca 5881 accacaacaa cagccaacat tttacaatcc agacttaatg caacaacaac cgcagcaaac 5941 ccaaaatagc atgttggcca cggatgccca acaacaacca ttatctttgg atccctatca 6001 gacacaaaac gaaatgcctg ccatgcaggc caatgaacag caacagacat tagatgccaa 6061 ccaatcatca acaacggctc aaactgatgt ttatcatcag cagacggccg cctatatgca 6121 gcccgatatg acaagctatg gtcaaaatta ttatgatccc actcagcagc agcaaggact 6181 acaaaactac aataatgaag gcggccatat ggatgcaaca caaacgactg atagtggctc 6241 ttatgattat tgggctcaac agcaacaaca agttactaca gcacagcctt acggcttgga 6301 tgagcagcat gaatcacctc ctcatgcaca aacccaagct ttggaaggcc aaaagtcagc 6361 tgccaccccc aaaaacagca ccaacaacag ccaaggggag gcggtaaggg cagcagctgc 6421 aacacctaaa gccactttac ttttgaataa taaaaaatcc caattgaaaa tgaaaactaa 6481 ccataatatg atgatgcatg cctcacccgg tcatttgagt tcccaatata ataaggccaa 6541 attggaaaag gtctcgaaat taacaacgac gatattggcc aacaccaaca gctctaaaac 6601 taatttccct gttaagaaat ccccagaggt gtcaaccaaa caagcattta ataaattatt 6661 agaatatgaa acctcctcaa ccccctccaa cacacagacc accttggcag caacagcaac 6721 gactacaact cctttttcca taaacaataa tgcaagacca acaatatcga tgccaaaatc 6781 caaaacctac gatacagatg atgaaagttc gggcaaaaag cagcaagcaa ttggtggggg 6841 ccaaaaatca acaacgggca gtgaaggtaa aataatgcaa caacaaacag cgcaaaagaa 6901 taaggaaaat aaaaataatg ctgctggaaa ccaaaattct ggctggtttg gtggcatttg 6961 gaataagttt tccttgaaac ccaaaaatca aatgattttg cctgatgata agaatccctc 7021 tattgtctgg gatcctgaga aaaagaaatg ggtcaacact gatggtgatg agcaagagga 7081 ggaatcgttt aagcctcctc ccaaaatggg tgatatgatg atgatgtcac aagcaaatct 7141 tgcgccacca caaagtcaac ctcaacagaa tcaaatgcca agcttcatgg atcctcaaca 7201 acaacagcag caacaatatg tgcctacatc cctacctaat tcagcgtcat caccgaatcc 7261 catgcaacaa caacaacaac agcaaacatc agcacaatcc aatgtgacgg cggcgacgaa 7321 tccaaatgcc ccaggaccta cgaaaactcc cacattacag tcaaatatgt ttaaaatgca 7381 aagaaatcga actttaaaaa acgcttacgt tgacgttttt aatccctctg gtgctcctgt 7441 aaataaggct gctgaaaatg ttctcgctcc tgctttacct cctgccgcag tgcctcaaag 7501 tggatttttc ataccaggcg gctcagggtc aacagctggt ggtgttagtc aagataataa 7561 tggctatcag cagcaacaac aaccacaaga tacgccacag ttttacaatc ccaatcaata 7621 tgggaccggt actggttatt aaaacaaagg agttttataa cattttgttt gtttgttaaa 7681 gactctgatt tttttt