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LOCUS XM_013249457 3808 bp mRNA linear INV 02-SEP-2023 (LOC106085279), mRNA. ACCESSION XM_013249457 VERSION XM_013249457.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249457.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3808 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3808 /gene="LOC106085279" /note="AF4/FMR2 family member lilli; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085279" CDS 1438..3495 /gene="LOC106085279" /codon_start=1 /product="AF4/FMR2 family member lilli" /protein_id="XP_013104911.1" /db_xref="GeneID:106085279" /translation="MAMHHNAMLPGSAKFQSRPSSPPFAGFSPPNDYPHPHAQDPVAS MQMQQHALAQQQQHQQQQQLQHHQQQMAQNHFHSMAGRHSGRNMTATASMKKRSASSS RGQHMVNSNTMTSGMISAVGAGSLGHHRGDLIFPDESDTIEFCMPPQPGSSNGIGHGI SSELLLTHGKNGLCTGEAFAERRRRGHSRRSNHKMDVEQQVKWSRNNIAATMERFEPT QHHSSSSTSSLEYGFAASVVTPSSTPSHHSQHQISPAPSQTFQSAATSSVAPYNHVYS YAYYEPGAAKCHTNIPPKEEAAAIMPAAATQVAASTAAVAAAAAAVAGPSKSPTRNSI RALLARSFRSKPKNSPSTSSSPSGAEDRHNYTTRYGTTENLYEEVNDQKIRKVLSDNR IVKSNVIEEIRRVQHNHFRVLDELNLSLEALIMPETPPDISPNVEVPEGPPVASANVA AVLATPTATAQKPRRGGLLGGAASTSSSTVSSSQPRTLSHASLENLSSTFNSIELKDH AHLSCINPEFDEGDLDSGFSGSGSSSGASYNESLRYYKSGHTPNHHPHHTMHHHQVQL HNHQVQLHPTHQQQQQQQTQQQQQQQLQQPTTLPHNMRSCRSSTASGSSTSKSSTVSS EDQGIAMMTSLGSCGTAVTSPASPFHYNRCCADIQRASARSASDSSATGAKPKKNFWK IKP" polyA_site 3808 /gene="LOC106085279" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccaaccgttt agccaaccag cccgctctcc atacagcggt gacaatattt gtgcattcaa 61 atccagtttt gattgttgtg ttaatgaata aattgtgtaa agtgcatgcg ttttgtctgc 121 gaccactgcg actgagacgc caacgtcgac aacaacacag tggacaatga aaacactttg 181 ttggtggtcg attgaaagag atttctcatt cggtgcgcct ttgtattcgt tcgtacgtac 241 gtacgtacca tcccccacta ccgccgttgt ctacttaact taagagaaat tctatttggc 301 ccacgatcga aagaatcatt tattatcaga aaataatgtg cattcataaa ttcaattcga 361 atttccatta aaacaaaaca aaaagagccc ctttaataac aaatgatggt ttatgcagga 421 ataatggctt gttgcatgta gcaaatggtg gaaataacag tgaaaatgtg gataataatg 481 aatgaaaata tttttaataa acagccgaaa tcctccattg agttaaaaga aaagaaacaa 541 cagatggcag aggttgacac catacgccat tgaaacaaaa tccaagacaa attagtggaa 601 aagcaaaaca aaacaaccaa aaaggtaccc acaaagaaag catcaaaaga atcatgtgga 661 gaattaacag aatataaaaa aagaaacgaa acgaaatgaa tgtggcaaca agtgttcaag 721 cattgaaaaa atttacgttc taccctaaga gatcatgaaa aaaagtcata atgttgtaaa 781 aatcatcatc gatcgaaaac ccatactaaa ttaaagctaa catttacagc attttgctga 841 atacaaaaaa aaaggaaatt aagtataaat tttcgaaaaa agtgcaatcg tgagccacta 901 ttaatcgaag ttcaagaaag aaaatttact tgaaaccaat tggcatataa cagtaaataa 961 ttgcttctaa cgcaaaacag ctgttatcgt tgttttacac caacattttc tattaactca 1021 aagaaattac tggataattt ctctattgaa ttggataact ttaaagatac tggattcgtg 1081 tacaattctt ttaaaacctt taaagagtat acccaatcac aaccaggcat ttaataaccc 1141 ctccatactc tgcgtcaaga attggaacag atttcaaatt tcccttgaat tttgtttcgg 1201 attgtcgtat tgaaggataa aaatattaca tttcaagtgg cttgactcgc tattcacacg 1261 gaaatccaca cttcacattg catcctctat aatgtcaagt ggttttgtat aaacacccgc 1321 tccgcaatac aatctcacca tagtcgaagt cagtcactca aacggcaaca ataattccag 1381 cacagttctt gcacaaacat ccagccgtaa cctgcagccc tacacaagtt ggctggcatg 1441 gctatgcatc acaacgccat gttaccgggt tcggcgaaat ttcagtcgag gccctcctcg 1501 ccaccatttg caggattttc gccacccaac gactatcccc atcctcatgc tcaggatcca 1561 gttgcatcga tgcagatgca gcaacatgct ctggcacagc aacagcagca ccagcagcag 1621 caacagttgc aacatcatca gcagcaaatg gctcaaaatc atttccattc aatggcagga 1681 cgtcactcgg gtcgcaacat gactgccacc gccagcatga agaagagatc ggcctcctca 1741 tcacgcggtc aacatatggt caattctaat accatgacca gtggtatgat atccgcagtg 1801 ggtgcgggaa gtttgggcca tcatcgagga gatttaatat tccccgacga gtcggatacc 1861 atagagtttt gtatgcctcc acaaccgggt tcatctaatg gcattggtca tggcattagt 1921 agtgaactac tgttgacaca tgggaaaaat ggtctgtgta ctggtgaggc ctttgccgag 1981 cgacgaagga gaggtcacag tcgacgaagt aaccataaaa tggatgttga acaacaggtt 2041 aaatggtctc gcaacaatat tgccgccaca atggaacgtt tcgagcccac acagcatcat 2101 tcgtcctctt caacttcatc gctggaatac gggtttgccg ccagtgttgt tacaccatcg 2161 tcaacaccat cgcatcactc ccagcatcaa atttcacctg ctccctcaca aacatttcag 2221 agtgctgcca catcgagtgt ggcaccctac aaccatgtct attcgtatgc ctactatgaa 2281 cctggtgctg ccaaatgtca tacgaatata ccaccaaaag aggaagctgc tgccattatg 2341 ccagctgcag ctactcaagt tgcggcttca acagccgcag tggcagcggc ggcggcagct 2401 gttgctggcc cttccaagag tccaacccgc aattcgatac gagccctgtt ggcgcgaagt 2461 tttcgttcga aacccaaaaa ttctccctca acttcgtcat cgcccagtgg ggcggaggat 2521 cgtcacaatt ataccacacg ttatggcact acggagaacc tctacgaaga ggttaacgat 2581 cagaagatac gcaaggtact ttccgataat cgtattgtca agtccaatgt cattgaagag 2641 atacgcagag tccaacacaa tcactttaga gttttagatg aattaaatct atcgctggag 2701 gctttgatta tgcccgagac tccgcccgat ataagtccca atgtggaggt gcccgaaggc 2761 cctccagtgg ctagcgccaa tgtagcggcg gtgctggcta cacccacggc tacggcacag 2821 aagccccgac gaggaggcct gctgggaggt gcagcttcca catcctcgtc aacagtgtct 2881 tcgtcacagc cgcgtacctt gtctcacgcc agcctagaga acctttcgtc aacttttaac 2941 tcaatagaac tgaaagatca cgcccatctt tcgtgtatta atccagaatt tgatgaggga 3001 gatttggaca gtggctttag tggcagtggc agcagtagtg gagccagtta caatgaaagt 3061 ctgcgttact ataaatccgg ccatactccc aaccaccatc ctcatcacac catgcaccac 3121 caccaggtgc agttgcacaa tcaccaggtg caactgcatc ccacacatca gcagcaacag 3181 cagcagcaaa cgcagcaaca acaacagcag cagcttcaac aacccaccac tttaccccac 3241 aatatgcgca gttgtcgatc ttccacggca tccggttcat caacttccaa aagtagcacg 3301 gtttcatccg aggatcaggg cattgctatg atgacttcat taggcagctg tggaacagcc 3361 gtcacttcgc cagcatcgcc cttccattat aatcgctgtt gcgccgacat acagcgggca 3421 tcggcgcgtt cggcctctga ttcctcagcg acgggtgcta aaccaaaaaa gaacttttgg 3481 aaaataaaac cgtgatgcta taaaagggct ttacgtaaac tctgcaagcg ttggagtata 3541 gtggtggtaa gttaaattag ttcgtccgcc aacccctact ccccccacat aactgtttct 3601 tctttctcga tccatctatc tatctatctc tctcccaaac tatcttgtaa actctgtcta 3661 tctttataca ttctaaattt aaggcattat atacaaacaa aaagaaaaac aagtgatgta 3721 tttgtaaaaa caaaacaaaa acctaaaacg aaatatttaa aaacaagcta aaaataaaca 3781 cacacacaca gaaaacctta gaaagcta