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LOCUS XM_013249447 7695 bp mRNA linear INV 02-SEP-2023 (LOC106085249), transcript variant X6, mRNA. ACCESSION XM_013249447 VERSION XM_013249447.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249447.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7695 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7695 /gene="LOC106085249" /note="uncharacterized LOC106085249; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106085249" CDS 16..7641 /gene="LOC106085249" /codon_start=1 /product="uncharacterized protein LOC106085249 isoform X6" /protein_id="XP_013104901.2" /db_xref="GeneID:106085249" /translation="MSWVHHHKPSTSSTNNTSSLLTSSSSLSSLAKTANPCSTAQQNF NINASTMPTSPMAAANVAQKQVLPPPTRPPFSSSSSASSLTATSVLRSQATSNNSSLL MTSQQYPNKTNLHTTTNSTMPSMRLSNTSNAPYTLAQQPQQQQRQQYIPPTATPQYGT PNNNTSTTNNHLVQGPFNNNQQNSWQTHSVTSQNYLPTSKMMPQMQPPLPTVGATNAG ANNNWQSGQQNYQSSNMMYQQHAGGVAPQQHQQHQQQQWPQQNSAVNQQMYDNSFNHQ QQQVSNNAYQQQQQQQAAAASYFQQAAAPQPQQQQQPLQTSLTNMSQTTTTNAVNFFD NANNNNNNNQSTGDGWGDWDWNDNSTIEANESAIQHQQQQQQQQISTQMHHPPQSQQQ TQPPPPTAVAAPPPLPAVANDHNQAFNSSNIIADSFNQQSNDTWNWNATNAAVENVPA HVENKTALAKVEQQHNDNWNWTTTNEEDTQPQQQQQQQQTVVTNDHASNDNWNWSSNE TNQQQIAQTTSTVQDIKQAVQPASKSVEAAAIMPLAPPPTEFSSSAVSENHNYNTNAA PQTSTSTNIPNTVFVSQAKPVTLPSRQYASPPMGNTPVSENPPTEGTALMPPQAFQNA EEAAVSRPTNLQSPALPPPTTTVPPPAGLPPAATAAAAGNPFKRSGLAQHHRATALMP TMPQASPAVFNMPPPPPADFANPSSSSNVTLMEPENNEIPSQENQEILAPPAAIMQPS LQPPTSTISLPNAATVAQPPNDERNQYLQTSHLSENSEDQQPEADGLLPPPGLSRLVL GEPELEASQRMVMGTDAPVLGSNATVADVMHLEERHADGEDTASENAVPVISGAMGGV GGQGSPPSTSDRNLYLVPGESNVNNQQRVVTGVELQEQREIEMDGENLEDQQQQQQQQ QQQNHHHQQPQQQQHHNHHQPSPQTHQTLSPEARNEPPVEGAADIIEPSVPAPSVSQP LEQASDAHHHPHQPSKTKESHNNISSPNDDDDSDERLLNERAMDHSTAGSSKSRTKYD NERYGGRVRRSLNRYAAYASDEYVNSDGDGDYSSDREERERRERNDRRRNYREGSVRS DRGGDEDESKRNRRQQRDKRDKYYYEGEERPRAGERSKTDSRRSQRQRGYENDSRYET EESTRFDARKESSRRSMRHSEAAERNRRGDRSDQGGEYEDYPRKGQGYRSSKRSGENY ESDRRDRRRGGDDYDNTIERRRRSDKHRDRDPRYNDPRYDPREYEEYRKHSSRNARDS DLEKEGGGGGGPPRSGRMHHDGRHAAAMYGGYPGGGYYDPYTAYYYQQMARNNPQAYA EWYKKYYGQHAAAVTAGSTQAMPASADTSLTAAANDGRESVHSGRSSAHNDLKDRSGA ISVRDPDPIASEPQRLTPCKFINEHAVVSFGSGILVTVKPKYTPHGQISNIVKLLKFK PNDETRKLFKVFPGPLVRGLTHKKTVIEFCQEQIRLGPMETTIYAKQLISNNAEKYRA SYTLMWNLLILLLKQNGMVVGTDIAELLLKNQQQFAYQTPNNSMNNSLKSKSGSTSPV AEDNEAIKDDADIANNEESKEDKDQELRESSEEKMPSSSSNALSETEITEKFRNYLLY GNVNEALEWATDNNLWGHALFLASKLDRRSHANVMMKFANKLALNDPLQTLYQLMSGR SPSSVTCVQDEKWGDWRPHLSMILSNTSQKPELDRKAITTLGDSLFNRGDLYAAHFCY LMAQVGFGRYQESATQENTLQQHLPKLVLLGSSHYKQFQEFAHNEAIVMTEIYEYACS LNDDKFSIVEFQPYKFILATRLLDYGFHLKSLMYLEQISVHIARDPTKYESSFINKVY EMADRLKYYDPVLEKTIDDQQQLGNEEGDNALNTSQQQLEEQKWLQSLRQMAQQYKID YAVPANSAVDSQQQQVMDPSFGYQQQHIDQQFMEINKQFSELNLQYQDQQQQQPQPQQ QPTFYNPDLMQQQPQQTQNSMLATDAQQQPLSLDPYQTQNEMPAMQANEQQQTLDANQ SSTTAQTDVYHQQTAAYMQPDMTSYGQNYYDPTQQQQGLQNYNNEGGHMDATQTTDSG SYDYWAQQQQQVTTAQPYGLDEQHESPPHAQTQALEGQKSAATPKNSTNNSQGEAVRA AAATPKATLLLNNKKSQLKMKTNHNMMMHASPGHLSSQYNKAKLEKVSKLTTTILANT NSSKTNFPVKKSPEVSTKQAFNKLLEYETSSTPSNTQTTLAATATTTTPFSINNNARP TISMPKSKTYDTDDESSGKKQQAIGGGQKSTTGSEGKIMQQQTAQKNKENKNNAAGNQ NSGWFGGIWNKFSLKPKNQMILPDDKNPSIVWDPEKKKWVNTDGDEQEEESFKPPPKM GDMMMMSQANLAPPQSQPQQNQMPSFMDPQQQQQQQYVPTSLPNSASSPNPMQQQQQQ QTSAQSNVTAATNPNAPGPTKTPTLQSNMFKMQRNRTLKNAYVDVFNPSGAPVNKAAE NVLAPALPPAAVPQSGFFIPGGSGSTAGGVSQDNNGYQQQQQPQDTPQFYNPNQYGTG TGY" polyA_site 7695 /gene="LOC106085249" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgaataagg ccaacatgtc ttgggtacat catcacaaac catctacatc atcaacaaac 61 aacacatcat cacttttaac atcatcatca tcattatcct ctttagcgaa aactgcaaat 121 ccttgttcaa cagctcagca aaatttcaat attaatgcct caaccatgcc tacttctccc 181 atggctgctg caaatgtagc ccagaaacag gtgttgccgc caccaacgcg tccacctttt 241 tcctcgtcgt catctgcatc atcattaaca gcaacatctg tactgaggtc tcaggctact 301 tcgaataatt cttctctctt gatgacgtca caacaatatc caaataaaac gaatttacat 361 acgaccacaa atagcaccat gccgtcaatg cgtttaagta atacttcaaa tgctccttat 421 acgctggcac aacaaccgca acagcagcag cgtcaacagt atataccacc cactgctaca 481 ccacaatatg gtactcccaa taacaatacc agcacaacca acaatcatct ggtacaaggg 541 ccatttaata ataatcaaca gaattcgtgg caaacacatt ctgtaacttc acaaaattat 601 ttgccaacat caaaaatgat gccacaaatg caacctccat tgccaacagt gggagcaaca 661 aatgctgggg caaataacaa ttggcaaagt ggacagcaaa attatcagag cagtaatatg 721 atgtatcaac agcatgcagg tggtgtagcg ccacaacaac accagcaaca tcaacagcaa 781 caatggccgc agcaaaattc ggctgtcaat cagcagatgt atgataattc attcaatcat 841 cagcagcaac aggtcagcaa taatgcgtat caacaacaac aacagcaaca agcagctgca 901 gcctcatatt ttcaacaagc tgcagcacca caaccccaac aacagcaaca accactacaa 961 acatcattaa ccaacatgtc acaaacaaca acaacaaatg cagtcaattt ctttgacaat 1021 gccaataata acaacaacaa caaccaatct accggtgatg gttggggtga ttgggattgg 1081 aatgataact ctactataga agccaatgag agcgctattc aacatcagca gcagcagcag 1141 cagcagcaaa tctctactca aatgcatcat ccaccacaat cacagcaaca aactcaacca 1201 ccacccccaa cagcagtagc cgcaccacca ccactacctg ctgttgctaa cgaccacaat 1261 caggcattta attcttctaa cattattgct gatagtttta atcagcaatc aaatgatact 1321 tggaattgga atgctaccaa tgctgcagtt gagaatgtgc cagctcatgt tgagaataaa 1381 acggcactgg caaaggtaga gcagcagcat aatgacaatt ggaattggac aaccacgaac 1441 gaggaggaca ctcagcctca gcagcaacaa caacaacaac aaacagttgt tacgaacgat 1501 cacgccagca acgataattg gaattggtca tcgaacgaaa cgaatcagca acaaattgca 1561 caaacaacat ctacggtgca ggatatcaag caagctgttc agccagcttc aaaatctgta 1621 gaagccgccg ccatcatgcc cttagcacca cctccaacgg aattttcttc gagtgctgta 1681 tcggaaaatc acaactataa cacaaatgca gcacctcaaa catcgacatc aactaacatt 1741 ccaaacacag tatttgtgtc gcaagccaaa ccggtgacct tgccctctcg gcaatatgcc 1801 tcgcctccca tgggcaatac tccggtcagt gaaaaccctc ccacagaggg tactgcatta 1861 atgcctcccc aggccttcca aaatgccgag gaggcagctg ttagcagacc aactaatttg 1921 caatcacctg ctttgccgcc accaacaacc actgttcctc cacccgccgg tttgcctcct 1981 gcagcaacag cggctgcagc tggaaatcca tttaaacgtt cgggtttggc tcaacatcat 2041 cgtgctactg ctttaatgcc cactatgcca caagctagtc ctgctgtttt taatatgccg 2101 ccgccaccgc cagcagattt tgcgaatccc tcatcatcgt ccaatgtaac actgatggag 2161 cccgaaaaca atgaaattcc ctcacaagaa aatcaagaaa ttttggctcc ccctgcagcc 2221 ataatgcaac cgtcattgca accaccaacc tccaccatta gtttgccaaa tgctgctaca 2281 gtggcacagc ctcctaatga tgaacgcaat caatatctgc agaccagtca tctatcggaa 2341 aattccgaag atcaacagcc tgaagcggat ggccttttac cacctccagg tttatcgcgt 2401 ttggttttgg gcgaaccaga attggaggcc tcacaaagga tggttatggg tactgatgcg 2461 cctgtgctgg gtagtaatgc caccgtggca gatgttatgc atttggaaga gcgtcatgca 2521 gatggcgagg atacagcttc agaaaatgca gtgcctgtta taagtggtgc gatgggtggt 2581 gttggcggac aaggttctcc cccctccaca tccgatcgta atctgtattt ggtccctggc 2641 gaaagcaatg tcaataacca acaacgagtt gtcactggag tggagttgca agagcaaaga 2701 gaaatcgaaa tggatggtga aaatcttgaa gatcagcaac aacaacaaca acaacagcag 2761 cagcaaaacc atcatcatca gcagccgcaa caacagcagc atcataacca tcatcagcca 2821 tctccccaaa ctcatcaaac tctatcgcct gaagctcgca atgaacctcc tgttgaggga 2881 gccgctgaca ttattgagcc ttctgtgcct gcacctagcg taagtcaacc tttggagcaa 2941 gcctccgatg cacatcatca tccccatcag ccctcaaaaa ccaaggaatc gcataataat 3001 atttcttcgc ccaatgatga cgatgacagc gatgagcgcc ttctcaatga acgagccatg 3061 gaccatagca ctgccggttc ttcaaagtct cgcacgaaat atgacaatga acgctacggg 3121 ggtcgcgtta gacgttcctt gaatcgttat gcagcttatg catctgacga atatgtgaat 3181 agcgatggtg atggtgacta ttccagtgac cgcgaagaac gtgaacgtag ggaaagaaat 3241 gatcgtcgtc gtaattatcg tgagggtagt gtacgcagtg atcgcggcgg agacgaagac 3301 gagagcaaac gtaatcgccg tcagcaacgt gataaacgtg acaaatacta ttacgaaggc 3361 gaggaacgcc caagggcagg cgaacgttcc aagaccgact ccagacgttc ccaacggcag 3421 cggggctatg agaatgattc acgctatgaa accgaagagt ctacacgttt tgatgcgcgc 3481 aaagaatcat ctcgccgcag catgcgtcat tcggaggccg cggagcgtaa tcgtcgtggt 3541 gatcgcagtg atcaaggtgg cgaatatgag gattatcctc gcaaaggaca aggctatcgt 3601 tcttctaagc gttctggcga aaactatgaa tctgatcgta gggacagaag acgcggcggc 3661 gatgactatg acaatacaat cgaaagacgg cgtcgcagcg ataaacatcg tgaccgtgat 3721 ccccgttaca atgatcctcg ctatgatcca cgcgaatatg aagaatatcg caaacatagt 3781 tcgcgtaatg ctcgtgacag tgatttggag aaagaaggtg gcggcggtgg aggaccacca 3841 cgttctggca gaatgcatca tgatggccgt catgctgctg ccatgtatgg tggttaccct 3901 ggcggaggat actatgatcc atataccgcc tactactatc aacaaatggc acgcaacaat 3961 ccccaagcct atgccgaatg gtataagaaa tactatggcc aacatgctgc tgccgtgaca 4021 gctggttcta cgcaggcaat gccagccagc gcagacacct cattgaccgc tgcagccaat 4081 gatggacgtg aatcggtgca ctctggacgc agttcagctc ataatgattt aaaagataga 4141 tctggtgcta tatccgtgcg cgatccagat cccatagcat cggagccaca acgtttaaca 4201 ccttgcaaat ttatcaatga gcatgcagtg gtgagttttg gctcaggcat tttggtaacg 4261 gtcaaaccaa aatacacacc acatggtcag atcagtaaca tagtgaagct gttgaagttt 4321 aagcccaatg atgagaccag aaaattattc aaagtcttcc caggaccttt ggtcagaggt 4381 ttaacacaca agaaaacggt tatagaattt tgccaggagc aaatacgttt gggacccatg 4441 gagacaacca tatatgccaa acaattgatt agcaataatg cagagaaata tagggcctcc 4501 tataccttaa tgtggaatct attgatattg ctgttgaaac agaatgggat ggttgtgggc 4561 actgacattg ctgaattgct attgaaaaat caacaacaat ttgcctatca aacacccaac 4621 aattctatga acaattctct aaaatctaaa tcgggtagca cttcccctgt ggcggaggac 4681 aatgaggcaa tcaaagatga tgctgatatt gcaaataatg aagagtctaa agaagataaa 4741 gaccaagagt tacgagaatc ctcggaagaa aaaatgccct cctccagctc aaacgctttg 4801 agtgaaacag aaattaccga gaaatttaga aactatttgt tgtatggcaa tgtcaatgag 4861 gccttggaat gggccaccga taataatttg tggggtcatg cattattctt ggcctctaaa 4921 ttggatcgtc gttcgcatgc caatgttatg atgaagtttg ccaataaatt ggctttaaat 4981 gaccctctgc agacgctcta tcaattgatg agtggtcgtt caccttcaag tgtgacctgt 5041 gtacaggatg aaaaatgggg tgattggcgt cctcatctat ccatgatttt atcgaatact 5101 tcacaaaaac cagaattgga tcgtaaggcc attacgactt tgggtgattc cctattcaat 5161 cgtggcgatt tgtatgcagc ccatttttgt tatctaatgg cgcaagttgg ttttggacgc 5221 tatcaggagt cggcaacaca ggagaataca ttgcaacagc atttgccaaa attggttttg 5281 ttgggctcct ctcactacaa acaattccaa gagtttgctc acaacgaagc gattgtcatg 5341 actgaaatct atgaatatgc ctgttccttg aatgatgata aattttcaat tgtagagttt 5401 cagccttata aattcatttt ggccacacgt ttattggact atggtttcca tttgaagagt 5461 ttaatgtatt tggaacaaat ttctgtacac attgcacggg atccaacgaa atatgagagt 5521 agtttcatca acaaggtcta tgaaatggca gatcgtttga agtactacga tccagtctta 5581 gaaaaaacca tagatgatca gcaacaacta ggcaacgagg aaggagataa tgccctaaac 5641 acctcacaac aacaattgga ggaacaaaaa tggttgcaaa gtctaaggca aatggctcaa 5701 caatataaaa ttgattatgc tgtgccagcg aactcggctg tggacagtca gcagcaacaa 5761 gtgatggatc ccagttttgg ttatcaacaa caacatatag atcaacaatt tatggaaatc 5821 aataaacaat tcagtgaatt gaatctgcaa tatcaagatc agcagcagca acaaccacaa 5881 ccacaacaac agccaacatt ttacaatcca gacttaatgc aacaacaacc gcagcaaacc 5941 caaaatagca tgttggccac ggatgcccaa caacaaccat tatctttgga tccctatcag 6001 acacaaaacg aaatgcctgc catgcaggcc aatgaacagc aacagacatt agatgccaac 6061 caatcatcaa caacggctca aactgatgtt tatcatcagc agacggccgc ctatatgcag 6121 cccgatatga caagctatgg tcaaaattat tatgatccca ctcagcagca gcaaggacta 6181 caaaactaca ataatgaagg cggccatatg gatgcaacac aaacgactga tagtggctct 6241 tatgattatt gggctcaaca gcaacaacaa gttactacag cacagcctta cggcttggat 6301 gagcagcatg aatcacctcc tcatgcacaa acccaagctt tggaaggcca aaagtcagct 6361 gccaccccca aaaacagcac caacaacagc caaggggagg cggtaagggc agcagctgca 6421 acacctaaag ccactttact tttgaataat aaaaaatccc aattgaaaat gaaaactaac 6481 cataatatga tgatgcatgc ctcacccggt catttgagtt cccaatataa taaggccaaa 6541 ttggaaaagg tctcgaaatt aacaacgacg atattggcca acaccaacag ctctaaaact 6601 aatttccctg ttaagaaatc cccagaggtg tcaaccaaac aagcatttaa taaattatta 6661 gaatatgaaa cctcctcaac cccctccaac acacagacca ccttggcagc aacagcaacg 6721 actacaactc ctttttccat aaacaataat gcaagaccaa caatatcgat gccaaaatcc 6781 aaaacctacg atacagatga tgaaagttcg ggcaaaaagc agcaagcaat tggtgggggc 6841 caaaaatcaa caacgggcag tgaaggtaaa ataatgcaac aacaaacagc gcaaaagaat 6901 aaggaaaata aaaataatgc tgctggaaac caaaattctg gctggtttgg tggcatttgg 6961 aataagtttt ccttgaaacc caaaaatcaa atgattttgc ctgatgataa gaatccctct 7021 attgtctggg atcctgagaa aaagaaatgg gtcaacactg atggtgatga gcaagaggag 7081 gaatcgttta agcctcctcc caaaatgggt gatatgatga tgatgtcaca agcaaatctt 7141 gcgccaccac aaagtcaacc tcaacagaat caaatgccaa gcttcatgga tcctcaacaa 7201 caacagcagc aacaatatgt gcctacatcc ctacctaatt cagcgtcatc accgaatccc 7261 atgcaacaac aacaacaaca gcaaacatca gcacaatcca atgtgacggc ggcgacgaat 7321 ccaaatgccc caggacctac gaaaactccc acattacagt caaatatgtt taaaatgcaa 7381 agaaatcgaa ctttaaaaaa cgcttacgtt gacgttttta atccctctgg tgctcctgta 7441 aataaggctg ctgaaaatgt tctcgctcct gctttacctc ctgccgcagt gcctcaaagt 7501 ggatttttca taccaggcgg ctcagggtca acagctggtg gtgttagtca agataataat 7561 ggctatcagc agcaacaaca accacaagat acgccacagt tttacaatcc caatcaatat 7621 gggaccggta ctggttatta aaacaaagga gttttataac attttgtttg tttgttaaag 7681 actctgattt ttttt