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LOCUS XM_013249438 8319 bp mRNA linear INV 02-SEP-2023 (LOC106085249), transcript variant X5, mRNA. ACCESSION XM_013249438 VERSION XM_013249438.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249438.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8319 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8319 /gene="LOC106085249" /note="uncharacterized LOC106085249; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106085249" CDS 27..7718 /gene="LOC106085249" /codon_start=1 /product="uncharacterized protein LOC106085249 isoform X5" /protein_id="XP_013104892.2" /db_xref="GeneID:106085249" /translation="MSWVHHHKPSTSSTNNTSSLLTSSSSLSSLAKTANPCSTAQQNF NINASTMPTSPMAAANVAQKQVLPPPTRPPFSSSSSASSLTATSVLRSQATSNNSSLL MTSQQYPNKTNLHTTTNSTMPSMRLSNTSNAPYTLAQQPQQQQRQQYIPPTATPQYGT PNNNTSTTNNHLVQGPFNNNQQNSWQTHSVTSQNYLPTSKMMPQMQPPLPTVGATNAG ANNNWQSGQQNYQSSNMMYQQHAGGVAPQQHQQHQQQQWPQQNSAVNQQMYDNSFNHQ QQQVSNNAYQQQQQQQAAAASYFQQAAAPQPQQQQQPLQTSLTNMSQTTTTNAVNFFD NANNNNNNNQSTGDGWGDWDWNDNSTIEANESAIQHQQQQQQQQISTQMHHPPQSQQQ TQPPPPTAVAAPPPLPAVANDHNQAFNSSNIIADSFNQQSNDTWNWNATNAAVENVPA HVENKTALAKVEQQHNDNWNWTTTNEEDTQPQQQQQQQQTVVTNDHASNDNWNWSSNE TNQQQIAQTTSTVQDIKQAVQPASKSVEAAAIMPLAPPPTEFSSSAVSENHNYNTNAA PQTSTSTNIPNTVFVSQAKPVTLPSRQYASPPMGNTPVSENPPTEGTALMPPQAFQNA EEAAVSRPTNLQSPALPPPTTTVPPPAGLPPAATAAAAGNPFKRSGLAQHHRATALMP TMPQASPAVFNMPPPPPADFANPSSSSNVTLMEPENNEIPSQENQEILAPPAAIMQPS LQPPTSTISLPNAATVAQPPNDERNQYLQTSHLSENSEDQQPEADGLLPPPGLSRLVL GEPELEASQRMVMGTDAPVLGSNATVADVMHLEERHADGEDTASENAVPVISGAMGGV GGQGSPPSTSDRNLYLVPGESNVNNQQRVVTGVELQEQREIEMDGENLEDQQQQQQQQ QQQNHHHQQPQQQQHHNHHQPSPQTHQTLSPEARNEPPVEGAADIIEPSVPAPSVSQP LEQASDAHHHPHQPSKTKESHNNISSPNDDDDSDERLLNERAMDHSTAGSSKSRTKYD NERYGGRVRRSLNRYAAYASDEYVNSDGDGDYSSDREERERRERNDRRRNYREGSVRS DRGGDEDESKRNRRQQRDKRDKYYYEGEERPRAGERSKTDSRRSQRQRGYENDSRYET EESTRFDARKESSRRSMRHSEAAERNRRGDRSDQGGEYEDYPRKGQGYRSSKRSGENY ESDRRDRRRGGDDYDNTIERRRRSDKHRDRDPRYNDPRYDPREYEEYRKHSSRNARDS DLEKEGGGGGGPPRSGRMHHDGRHAAAMYGGYPGGGYYDPYTAYYYQQMARNNPQAYA EWYKKYYGQHAAAVTAGSTQAMPASADTSLTAAANDGRESVHSGRSSAHNDLKDRYTH AYITQANEYHRHYHHHQQQQQHHHQQLQQHHHHQHHLQQMAFNQTHNSTMLVDEDSLN QSTSLYSGIGGGGGLSQAHSQTNLSQIHGGYYVTPSVLQTAAAAGAHATPSLYYARSD YAESRSGAISVRDPDPIASEPQRLTPCKFINEHAVVSFGSGILVTVKPKYTPHGQISN IVKLLKFKPNDETRKLFKVFPGPLVRGLTHKKTVIEFCQEQIRLGPMETTIYAKQLIS NNAEKYRASYTLMWNLLILLLKQNGMVVGTDIAELLLKNQQQFAYQTPNNSMNNSLKS KSGSTSPVAEDNEAIKDDADIANNEESKEDKDQELRESSEEKMPSSSSNALSETEITE KFRNYLLYGNVNEALEWATDNNLWGHALFLASKLDRRSHANVMMKFANKLALNDPLQT LYQLMSGRSPSSVTCVQDEKWGDWRPHLSMILSNTSQKPELDRKAITTLGDSLFNRGD LYAAHFCYLMAQVGFGRYQESATQENTLQQHLPKLVLLGSSHYKQFQEFAHNEAIVMT EIYEYACSLNDDKFSIVEFQPYKFILATRLLDYGFHLKSLMYLEQISVHIARDPTKYE SSFINKVYEMADRLKYYDPVLEKTIDDQQQLGNEEGDNALNTSQQQLEEQKWLQSLRQ MAQQYKIDYAVPANSAVDSQQQQVMDPSFGYQQQHIDQQFMEINKQFSELNLQYQDQQ QQQPQPQQQPTFYNPDLMQQQPQQTQNSMLATDAQQQPLSLDPYQTQNEMPAMQANEQ QQTLDANQSSTTAQTDVYHQQTAAYMQPDMTSYGQNYYDPTQQQQGLQNYNNEGGHMD ATQTTDSGSYDYWAQQQQQVTTAQPYGLDEQHESPPHAQTQALEGQKSAATPKNSTNN SQGEAVRAAAATPKATLLLNNKKSQLKMKTNHNMMMHASPGHLSSQYNKAKLEKVSKL TTTILANTNSSKTNFPVKKSPEVSTKQAFNKLLEYETSSTPSNTQTTLAATATTTTPF SINNTRFNNYDPEANCGGLDELLYEAYISSNEDYDDEEDDDDEDDDDVDNDEQVNFLM YEPNSQDLESENLPFLHHRQQRRHKALSSYGIIRAQTNSNLNPSASASNSHPQHNQVL AQKAPQVWSMQELIHDRSIPLNYKKMCHEVEHSLQQFEKYIDSKSGSSYDSHQKQQNV EQQKSLAPEVKTFNIDDPIDFKKNK" ORIGIN 1 gcactttgat tttgaataag gccaacatgt cttgggtaca tcatcacaaa ccatctacat 61 catcaacaaa caacacatca tcacttttaa catcatcatc atcattatcc tctttagcga 121 aaactgcaaa tccttgttca acagctcagc aaaatttcaa tattaatgcc tcaaccatgc 181 ctacttctcc catggctgct gcaaatgtag cccagaaaca ggtgttgccg ccaccaacgc 241 gtccaccttt ttcctcgtcg tcatctgcat catcattaac agcaacatct gtactgaggt 301 ctcaggctac ttcgaataat tcttctctct tgatgacgtc acaacaatat ccaaataaaa 361 cgaatttaca tacgaccaca aatagcacca tgccgtcaat gcgtttaagt aatacttcaa 421 atgctcctta tacgctggca caacaaccgc aacagcagca gcgtcaacag tatataccac 481 ccactgctac accacaatat ggtactccca ataacaatac cagcacaacc aacaatcatc 541 tggtacaagg gccatttaat aataatcaac agaattcgtg gcaaacacat tctgtaactt 601 cacaaaatta tttgccaaca tcaaaaatga tgccacaaat gcaacctcca ttgccaacag 661 tgggagcaac aaatgctggg gcaaataaca attggcaaag tggacagcaa aattatcaga 721 gcagtaatat gatgtatcaa cagcatgcag gtggtgtagc gccacaacaa caccagcaac 781 atcaacagca acaatggccg cagcaaaatt cggctgtcaa tcagcagatg tatgataatt 841 cattcaatca tcagcagcaa caggtcagca ataatgcgta tcaacaacaa caacagcaac 901 aagcagctgc agcctcatat tttcaacaag ctgcagcacc acaaccccaa caacagcaac 961 aaccactaca aacatcatta accaacatgt cacaaacaac aacaacaaat gcagtcaatt 1021 tctttgacaa tgccaataat aacaacaaca acaaccaatc taccggtgat ggttggggtg 1081 attgggattg gaatgataac tctactatag aagccaatga gagcgctatt caacatcagc 1141 agcagcagca gcagcagcaa atctctactc aaatgcatca tccaccacaa tcacagcaac 1201 aaactcaacc accaccccca acagcagtag ccgcaccacc accactacct gctgttgcta 1261 acgaccacaa tcaggcattt aattcttcta acattattgc tgatagtttt aatcagcaat 1321 caaatgatac ttggaattgg aatgctacca atgctgcagt tgagaatgtg ccagctcatg 1381 ttgagaataa aacggcactg gcaaaggtag agcagcagca taatgacaat tggaattgga 1441 caaccacgaa cgaggaggac actcagcctc agcagcaaca acaacaacaa caaacagttg 1501 ttacgaacga tcacgccagc aacgataatt ggaattggtc atcgaacgaa acgaatcagc 1561 aacaaattgc acaaacaaca tctacggtgc aggatatcaa gcaagctgtt cagccagctt 1621 caaaatctgt agaagccgcc gccatcatgc ccttagcacc acctccaacg gaattttctt 1681 cgagtgctgt atcggaaaat cacaactata acacaaatgc agcacctcaa acatcgacat 1741 caactaacat tccaaacaca gtatttgtgt cgcaagccaa accggtgacc ttgccctctc 1801 ggcaatatgc ctcgcctccc atgggcaata ctccggtcag tgaaaaccct cccacagagg 1861 gtactgcatt aatgcctccc caggccttcc aaaatgccga ggaggcagct gttagcagac 1921 caactaattt gcaatcacct gctttgccgc caccaacaac cactgttcct ccacccgccg 1981 gtttgcctcc tgcagcaaca gcggctgcag ctggaaatcc atttaaacgt tcgggtttgg 2041 ctcaacatca tcgtgctact gctttaatgc ccactatgcc acaagctagt cctgctgttt 2101 ttaatatgcc gccgccaccg ccagcagatt ttgcgaatcc ctcatcatcg tccaatgtaa 2161 cactgatgga gcccgaaaac aatgaaattc cctcacaaga aaatcaagaa attttggctc 2221 cccctgcagc cataatgcaa ccgtcattgc aaccaccaac ctccaccatt agtttgccaa 2281 atgctgctac agtggcacag cctcctaatg atgaacgcaa tcaatatctg cagaccagtc 2341 atctatcgga aaattccgaa gatcaacagc ctgaagcgga tggcctttta ccacctccag 2401 gtttatcgcg tttggttttg ggcgaaccag aattggaggc ctcacaaagg atggttatgg 2461 gtactgatgc gcctgtgctg ggtagtaatg ccaccgtggc agatgttatg catttggaag 2521 agcgtcatgc agatggcgag gatacagctt cagaaaatgc agtgcctgtt ataagtggtg 2581 cgatgggtgg tgttggcgga caaggttctc ccccctccac atccgatcgt aatctgtatt 2641 tggtccctgg cgaaagcaat gtcaataacc aacaacgagt tgtcactgga gtggagttgc 2701 aagagcaaag agaaatcgaa atggatggtg aaaatcttga agatcagcaa caacaacaac 2761 aacaacagca gcagcaaaac catcatcatc agcagccgca acaacagcag catcataacc 2821 atcatcagcc atctccccaa actcatcaaa ctctatcgcc tgaagctcgc aatgaacctc 2881 ctgttgaggg agccgctgac attattgagc cttctgtgcc tgcacctagc gtaagtcaac 2941 ctttggagca agcctccgat gcacatcatc atccccatca gccctcaaaa accaaggaat 3001 cgcataataa tatttcttcg cccaatgatg acgatgacag cgatgagcgc cttctcaatg 3061 aacgagccat ggaccatagc actgccggtt cttcaaagtc tcgcacgaaa tatgacaatg 3121 aacgctacgg gggtcgcgtt agacgttcct tgaatcgtta tgcagcttat gcatctgacg 3181 aatatgtgaa tagcgatggt gatggtgact attccagtga ccgcgaagaa cgtgaacgta 3241 gggaaagaaa tgatcgtcgt cgtaattatc gtgagggtag tgtacgcagt gatcgcggcg 3301 gagacgaaga cgagagcaaa cgtaatcgcc gtcagcaacg tgataaacgt gacaaatact 3361 attacgaagg cgaggaacgc ccaagggcag gcgaacgttc caagaccgac tccagacgtt 3421 cccaacggca gcggggctat gagaatgatt cacgctatga aaccgaagag tctacacgtt 3481 ttgatgcgcg caaagaatca tctcgccgca gcatgcgtca ttcggaggcc gcggagcgta 3541 atcgtcgtgg tgatcgcagt gatcaaggtg gcgaatatga ggattatcct cgcaaaggac 3601 aaggctatcg ttcttctaag cgttctggcg aaaactatga atctgatcgt agggacagaa 3661 gacgcggcgg cgatgactat gacaatacaa tcgaaagacg gcgtcgcagc gataaacatc 3721 gtgaccgtga tccccgttac aatgatcctc gctatgatcc acgcgaatat gaagaatatc 3781 gcaaacatag ttcgcgtaat gctcgtgaca gtgatttgga gaaagaaggt ggcggcggtg 3841 gaggaccacc acgttctggc agaatgcatc atgatggccg tcatgctgct gccatgtatg 3901 gtggttaccc tggcggagga tactatgatc catataccgc ctactactat caacaaatgg 3961 cacgcaacaa tccccaagcc tatgccgaat ggtataagaa atactatggc caacatgctg 4021 ctgccgtgac agctggttct acgcaggcaa tgccagccag cgcagacacc tcattgaccg 4081 ctgcagccaa tgatggacgt gaatcggtgc actctggacg cagttcagct cataatgatt 4141 taaaagatag gtatacccat gcctacataa cacaagccaa tgaatatcat cgccattacc 4201 accatcacca acaacaacaa cagcatcatc atcaacaatt gcaacaacat catcaccacc 4261 aacaccatct ccaacaaatg gcattcaatc agacacacaa ttcgaccatg ttggtggatg 4321 aggactcatt gaatcaaagc actagtttat atagtggcat tggcggcggt ggtggccttt 4381 cacaggccca ttcccaaacg aatctttcgc aaattcatgg cggttactat gtaacgccct 4441 cggtcctaca aacagcagca gcagcaggag ctcatgcaac gccatctctc tattatgcac 4501 gttctgatta tgcggaatca agatctggtg ctatatccgt gcgcgatcca gatcccatag 4561 catcggagcc acaacgttta acaccttgca aatttatcaa tgagcatgca gtggtgagtt 4621 ttggctcagg cattttggta acggtcaaac caaaatacac accacatggt cagatcagta 4681 acatagtgaa gctgttgaag tttaagccca atgatgagac cagaaaatta ttcaaagtct 4741 tcccaggacc tttggtcaga ggtttaacac acaagaaaac ggttatagaa ttttgccagg 4801 agcaaatacg tttgggaccc atggagacaa ccatatatgc caaacaattg attagcaata 4861 atgcagagaa atatagggcc tcctatacct taatgtggaa tctattgata ttgctgttga 4921 aacagaatgg gatggttgtg ggcactgaca ttgctgaatt gctattgaaa aatcaacaac 4981 aatttgccta tcaaacaccc aacaattcta tgaacaattc tctaaaatct aaatcgggta 5041 gcacttcccc tgtggcggag gacaatgagg caatcaaaga tgatgctgat attgcaaata 5101 atgaagagtc taaagaagat aaagaccaag agttacgaga atcctcggaa gaaaaaatgc 5161 cctcctccag ctcaaacgct ttgagtgaaa cagaaattac cgagaaattt agaaactatt 5221 tgttgtatgg caatgtcaat gaggccttgg aatgggccac cgataataat ttgtggggtc 5281 atgcattatt cttggcctct aaattggatc gtcgttcgca tgccaatgtt atgatgaagt 5341 ttgccaataa attggcttta aatgaccctc tgcagacgct ctatcaattg atgagtggtc 5401 gttcaccttc aagtgtgacc tgtgtacagg atgaaaaatg gggtgattgg cgtcctcatc 5461 tatccatgat tttatcgaat acttcacaaa aaccagaatt ggatcgtaag gccattacga 5521 ctttgggtga ttccctattc aatcgtggcg atttgtatgc agcccatttt tgttatctaa 5581 tggcgcaagt tggttttgga cgctatcagg agtcggcaac acaggagaat acattgcaac 5641 agcatttgcc aaaattggtt ttgttgggct cctctcacta caaacaattc caagagtttg 5701 ctcacaacga agcgattgtc atgactgaaa tctatgaata tgcctgttcc ttgaatgatg 5761 ataaattttc aattgtagag tttcagcctt ataaattcat tttggccaca cgtttattgg 5821 actatggttt ccatttgaag agtttaatgt atttggaaca aatttctgta cacattgcac 5881 gggatccaac gaaatatgag agtagtttca tcaacaaggt ctatgaaatg gcagatcgtt 5941 tgaagtacta cgatccagtc ttagaaaaaa ccatagatga tcagcaacaa ctaggcaacg 6001 aggaaggaga taatgcccta aacacctcac aacaacaatt ggaggaacaa aaatggttgc 6061 aaagtctaag gcaaatggct caacaatata aaattgatta tgctgtgcca gcgaactcgg 6121 ctgtggacag tcagcagcaa caagtgatgg atcccagttt tggttatcaa caacaacata 6181 tagatcaaca atttatggaa atcaataaac aattcagtga attgaatctg caatatcaag 6241 atcagcagca gcaacaacca caaccacaac aacagccaac attttacaat ccagacttaa 6301 tgcaacaaca accgcagcaa acccaaaata gcatgttggc cacggatgcc caacaacaac 6361 cattatcttt ggatccctat cagacacaaa acgaaatgcc tgccatgcag gccaatgaac 6421 agcaacagac attagatgcc aaccaatcat caacaacggc tcaaactgat gtttatcatc 6481 agcagacggc cgcctatatg cagcccgata tgacaagcta tggtcaaaat tattatgatc 6541 ccactcagca gcagcaagga ctacaaaact acaataatga aggcggccat atggatgcaa 6601 cacaaacgac tgatagtggc tcttatgatt attgggctca acagcaacaa caagttacta 6661 cagcacagcc ttacggcttg gatgagcagc atgaatcacc tcctcatgca caaacccaag 6721 ctttggaagg ccaaaagtca gctgccaccc ccaaaaacag caccaacaac agccaagggg 6781 aggcggtaag ggcagcagct gcaacaccta aagccacttt acttttgaat aataaaaaat 6841 cccaattgaa aatgaaaact aaccataata tgatgatgca tgcctcaccc ggtcatttga 6901 gttcccaata taataaggcc aaattggaaa aggtctcgaa attaacaacg acgatattgg 6961 ccaacaccaa cagctctaaa actaatttcc ctgttaagaa atccccagag gtgtcaacca 7021 aacaagcatt taataaatta ttagaatatg aaacctcctc aaccccctcc aacacacaga 7081 ccaccttggc agcaacagca acgactacaa ctcctttttc cataaacaat accagattta 7141 acaattatga tcctgaagcc aattgtggtg gccttgatga gttgttatat gaggcttata 7201 tatcctccaa tgaagattat gatgatgaag aggacgatga tgatgaggat gacgatgatg 7261 ttgataatga tgagcaggtt aattttctta tgtatgaacc caacagtcaa gatttagagt 7321 cggaaaattt gccttttctt catcatcggc aacagcggcg tcataaagct ttgtcatcct 7381 atggtattat aagagcacaa accaactcca acctcaaccc ctcagcctca gcctcaaact 7441 cccaccccca gcacaatcaa gtcctggcac aaaaagcccc ccaggtatgg tctatgcaag 7501 aattaataca tgatcgttcc atacctttga actataagaa aatgtgtcat gaggttgaac 7561 attctttgca acaatttgaa aagtatatcg actcaaaaag tggctcatcg tatgactcac 7621 accaaaagca gcaaaatgtg gaacaacaaa aatctctagc gcctgaggtc aaaactttca 7681 atatagatga tcccatagat tttaaaaaga acaaataaaa attatatata aacattttaa 7741 gtagtcatta agtggtgtat ttacgaagta tttatataaa gtgatgatgt ttacaaaaaa 7801 aagatttttt gtctaaatta agtcaacaac aaaaaaaaac caaccgcact tggtttatgt 7861 ttttcttttg ttttaaaggt ttttgttttg ttattatttt ctatttgttt ataatgtcat 7921 atacacatat tttttgttaa ttaaaaagca tttcttatat cctatgtgtt gtaattgttt 7981 ctgtgtgtgt gtcccactca ctttttgggt agaattatta gctttcaaca aaaatgaact 8041 aattagttgt gaattttaaa acacagctgg taagttttgg ttaattagaa gcttttaaac 8101 gatacaaagc taagagtata ctaatgattt gcttattaat ctataagttc atgaaatagg 8161 aacagtatag caaaaaatag aaaagaaaat cattttcccc taggcgttcc catatcgtcg 8221 tttgggcttc ataaacatta aattacccac aaatatatgg aacagtgtac agtttttttc 8281 aattaactat tgcctaaaaa aaacgcatct caatcagtc