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LOCUS XM_013249418 8065 bp mRNA linear INV 02-SEP-2023 (LOC106085249), transcript variant X3, mRNA. ACCESSION XM_013249418 VERSION XM_013249418.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249418.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8065 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8065 /gene="LOC106085249" /note="uncharacterized LOC106085249; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106085249" CDS 17..8011 /gene="LOC106085249" /codon_start=1 /product="uncharacterized protein LOC106085249 isoform X3" /protein_id="XP_013104872.2" /db_xref="GeneID:106085249" /translation="MSWVHHHKPSTSSTNNTSSLLTSSSSLSSLAKTANPCSTAQQNF NINASTMPTSPMAAANVAQKQVLPPPTRPPFSSSSSASSLTATSVLRSQATSNNSSLL MTSQQYPNKTNLHTTTNSTMPSMRLSNTSNAPYTLAQQPQQQQRQQYIPPTATPQYGT PNNNTSTTNNHLVQGPFNNNQQNSWQTHSVTSQNYLPTSKMMPQMQPPLPTVGATNAG ANNNWQSGQQNYQSSNMMYQQHAGGVAPQQHQQHQQQQWPQQNSAVNQQMYDNSFNHQ QQQVSNNAYQQQQQQQAAAASYFQQAAAPQPQQQQQPLQTSLTNMSQTTTTNAVNFFD NANNNNNNNQSTGDGWGDWDWNDNSTIEANESAIQHQQQQQQQQISTQMHHPPQSQQQ TQPPPPTAVAAPPPLPAVANDHNQAFNSSNIIADSFNQQSNDTWNWNATNAAVENVPA HVENKTALAKVEQQHNDNWNWTTTNEEDTQPQQQQQQQQTVVTNDHASNDNWNWSSNE TNQQQIAQTTSTVQDIKQAVQPASKSVEAAAIMPLAPPPTEFSSSAVSENHNYNTNAA PQTSTSTNIPNTVFVSQAKPVTLPSRQYASPPMGNTPVSENPPTEGTALMPPQAFQNA EEAAVSRPTNLQSPALPPPTTTVPPPAGLPPAATAAAAGNPFKRSGLAQHHRATALMP TMPQASPAVFNMPPPPPADFANPSSSSNVTLMEPENNEIPSQENQEILAPPAAIMQPS LQPPTSTISLPNAATVAQPPNDERNQYLQTSHLSENSEDQQPEADGLLPPPGLSRLVL GEPELEASQRMVMGTDAPVLGSNATVADVMHLEERHADGEDTASENAVPVISGAMGGV GGQAPPSTSDRNLYLVPGESNVNNQQRVVTGVELQEQREIEMDGENLEDQQQQQQQQQ QQNHHHQQPQQQQHHNHHQPSPQTHQTLSPEARNEPPVEGAADIIEPSVPAPSVSQPL EQASDAHHHPHQPSKTKESHNNISSPNDDDDSDERLLNERAMDHSTAGSSKSRTKYDN ERYGGRVRRSLNRYAAYASDEYVNSDGDGDYSSDREERERRERNDRRRNYREGSVRSD RGGDEDESKRNRRQQRDKRDKYYYEGEERPRAGERSKTDSRRSQRQRGYENDSRYETE ESTRFDARKESSRRSMRHSEAAERNRRGDRSDQGGEYEDYPRKGQGYRSSKRSGENYE SDRRDRRRGGDDYDNTIERRRRSDKHRDRDPRYNDPRYDPREYEEYRKHSSRNARDSD LEKEGGGGGGPPRSGRMHHDGRHAAAMYGGYPGGGYYDPYTAYYYQQMARNNPQAYAE WYKKYYGQHAAAVTAGSTQAMPASADTSLTAAANDGRESVHSGRSSAHNDLKDRYTHA YITQANEYHRHYHHHQQQQQHHHQQLQQHHHHQHHLQQMAFNQTHNSTMLVDEDSLNQ STSLYSGIGGGGGLSQAHSQTNLSQIHGGYYVTPSVLQTAAAAGAHATPSLYYARSDY AESRSGAISVRDPDPIASEPQRLTPCKFINEHAVVSFGSGILVTVKPKYTPHGQISNI VKLLKFKPNDETRKLFKVFPGPLVRGLTHKKTVIEFCQEQIRLGPMETTIYAKQLISN NAEKYRASYTLMWNLLILLLKQNGMVVGTDIAELLLKNQQQFAYQTPNNSMNNSLKSK SGSTSPVAEDNEAIKDDADIANNEESKEDKDQELRESSEEKMPSSSSNALSETEITEK FRNYLLYGNVNEALEWATDNNLWGHALFLASKLDRRSHANVMMKFANKLALNDPLQTL YQLMSGRSPSSVTCVQDEKWGDWRPHLSMILSNTSQKPELDRKAITTLGDSLFNRGDL YAAHFCYLMAQVGFGRYQESATQENTLQQHLPKLVLLGSSHYKQFQEFAHNEAIVMTE IYEYACSLNDDKFSIVEFQPYKFILATRLLDYGFHLKSLMYLEQISVHIARDPTKYES SFINKVYEMADRLKYYDPVLEKTIDDQQQLGNEEGDNALNTSQQQLEEQKWLQSLRQM AQQYKIDYAVPANSAVDSQQQQVMDPSFGYQQQHIDQQFMEINKQFSELNLQYQDQQQ QQPQPQQQPTFYNPDLMQQQPQQTQNSMLATDAQQQPLSLDPYQTQNEMPAMQANEQQ QTLDANQSSTTAQTDVYHQQTAAYMQPDMTSYGQNYYDPTQQQQGLQNYNNEGGHMDA TQTTDSGSYDYWAQQQQQVTTAQPYGLDEQHESPPHAQTQALEGQKSAATPKNSTNNS QGEAVRAAAATPKATLLLNNKKSQLKMKTNHNMMMHASPGHLSSQYNKAKLEKVSKLT TTILANTNSSKTNFPVKKSPEVSTKQAFNKLLEYETSSTPSNTQTTLAATATTTTPFS INNNARPTISMPKSKTYDTDDESSGKKQQAIGGGQKSTTGSEGKIMQQQTAQKNKENK NNAAGNQNSGWFGGIWNKFSLKPKNQMILPDDKNPSIVWDPEKKKWVNTDGDEQEEES FKPPPKMGDMMMMSQANLAPPQSQPQQNQMPSFMDPQQQQQQQYVPTSLPNSASSPNP MQQQQQQQTSAQSNVTAATNPNAPGPTKTPTLQSNMFKMQRNRTLKNAYVDVFNPSGA PVNKAAENVLAPALPPAAVPQSGFFIPGGSGSTAGGVSQDNNGYQQQQQPQDTPQFYN PNQYGTGTGY" polyA_site 8065 /gene="LOC106085249" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttgaataag gccaacatgt cttgggtaca tcatcacaaa ccatctacat catcaacaaa 61 caacacatca tcacttttaa catcatcatc atcattatcc tctttagcga aaactgcaaa 121 tccttgttca acagctcagc aaaatttcaa tattaatgcc tcaaccatgc ctacttctcc 181 catggctgct gcaaatgtag cccagaaaca ggtgttgccg ccaccaacgc gtccaccttt 241 ttcctcgtcg tcatctgcat catcattaac agcaacatct gtactgaggt ctcaggctac 301 ttcgaataat tcttctctct tgatgacgtc acaacaatat ccaaataaaa cgaatttaca 361 tacgaccaca aatagcacca tgccgtcaat gcgtttaagt aatacttcaa atgctcctta 421 tacgctggca caacaaccgc aacagcagca gcgtcaacag tatataccac ccactgctac 481 accacaatat ggtactccca ataacaatac cagcacaacc aacaatcatc tggtacaagg 541 gccatttaat aataatcaac agaattcgtg gcaaacacat tctgtaactt cacaaaatta 601 tttgccaaca tcaaaaatga tgccacaaat gcaacctcca ttgccaacag tgggagcaac 661 aaatgctggg gcaaataaca attggcaaag tggacagcaa aattatcaga gcagtaatat 721 gatgtatcaa cagcatgcag gtggtgtagc gccacaacaa caccagcaac atcaacagca 781 acaatggccg cagcaaaatt cggctgtcaa tcagcagatg tatgataatt cattcaatca 841 tcagcagcaa caggtcagca ataatgcgta tcaacaacaa caacagcaac aagcagctgc 901 agcctcatat tttcaacaag ctgcagcacc acaaccccaa caacagcaac aaccactaca 961 aacatcatta accaacatgt cacaaacaac aacaacaaat gcagtcaatt tctttgacaa 1021 tgccaataat aacaacaaca acaaccaatc taccggtgat ggttggggtg attgggattg 1081 gaatgataac tctactatag aagccaatga gagcgctatt caacatcagc agcagcagca 1141 gcagcagcaa atctctactc aaatgcatca tccaccacaa tcacagcaac aaactcaacc 1201 accaccccca acagcagtag ccgcaccacc accactacct gctgttgcta acgaccacaa 1261 tcaggcattt aattcttcta acattattgc tgatagtttt aatcagcaat caaatgatac 1321 ttggaattgg aatgctacca atgctgcagt tgagaatgtg ccagctcatg ttgagaataa 1381 aacggcactg gcaaaggtag agcagcagca taatgacaat tggaattgga caaccacgaa 1441 cgaggaggac actcagcctc agcagcaaca acaacaacaa caaacagttg ttacgaacga 1501 tcacgccagc aacgataatt ggaattggtc atcgaacgaa acgaatcagc aacaaattgc 1561 acaaacaaca tctacggtgc aggatatcaa gcaagctgtt cagccagctt caaaatctgt 1621 agaagccgcc gccatcatgc ccttagcacc acctccaacg gaattttctt cgagtgctgt 1681 atcggaaaat cacaactata acacaaatgc agcacctcaa acatcgacat caactaacat 1741 tccaaacaca gtatttgtgt cgcaagccaa accggtgacc ttgccctctc ggcaatatgc 1801 ctcgcctccc atgggcaata ctccggtcag tgaaaaccct cccacagagg gtactgcatt 1861 aatgcctccc caggccttcc aaaatgccga ggaggcagct gttagcagac caactaattt 1921 gcaatcacct gctttgccgc caccaacaac cactgttcct ccacccgccg gtttgcctcc 1981 tgcagcaaca gcggctgcag ctggaaatcc atttaaacgt tcgggtttgg ctcaacatca 2041 tcgtgctact gctttaatgc ccactatgcc acaagctagt cctgctgttt ttaatatgcc 2101 gccgccaccg ccagcagatt ttgcgaatcc ctcatcatcg tccaatgtaa cactgatgga 2161 gcccgaaaac aatgaaattc cctcacaaga aaatcaagaa attttggctc cccctgcagc 2221 cataatgcaa ccgtcattgc aaccaccaac ctccaccatt agtttgccaa atgctgctac 2281 agtggcacag cctcctaatg atgaacgcaa tcaatatctg cagaccagtc atctatcgga 2341 aaattccgaa gatcaacagc ctgaagcgga tggcctttta ccacctccag gtttatcgcg 2401 tttggttttg ggcgaaccag aattggaggc ctcacaaagg atggttatgg gtactgatgc 2461 gcctgtgctg ggtagtaatg ccaccgtggc agatgttatg catttggaag agcgtcatgc 2521 agatggcgag gatacagctt cagaaaatgc agtgcctgtt ataagtggtg cgatgggtgg 2581 tgttggcgga caagctcccc cctccacatc cgatcgtaat ctgtatttgg tccctggcga 2641 aagcaatgtc aataaccaac aacgagttgt cactggagtg gagttgcaag agcaaagaga 2701 aatcgaaatg gatggtgaaa atcttgaaga tcagcaacaa caacaacaac aacagcagca 2761 gcaaaaccat catcatcagc agccgcaaca acagcagcat cataaccatc atcagccatc 2821 tccccaaact catcaaactc tatcgcctga agctcgcaat gaacctcctg ttgagggagc 2881 cgctgacatt attgagcctt ctgtgcctgc acctagcgta agtcaacctt tggagcaagc 2941 ctccgatgca catcatcatc cccatcagcc ctcaaaaacc aaggaatcgc ataataatat 3001 ttcttcgccc aatgatgacg atgacagcga tgagcgcctt ctcaatgaac gagccatgga 3061 ccatagcact gccggttctt caaagtctcg cacgaaatat gacaatgaac gctacggggg 3121 tcgcgttaga cgttccttga atcgttatgc agcttatgca tctgacgaat atgtgaatag 3181 cgatggtgat ggtgactatt ccagtgaccg cgaagaacgt gaacgtaggg aaagaaatga 3241 tcgtcgtcgt aattatcgtg agggtagtgt acgcagtgat cgcggcggag acgaagacga 3301 gagcaaacgt aatcgccgtc agcaacgtga taaacgtgac aaatactatt acgaaggcga 3361 ggaacgccca agggcaggcg aacgttccaa gaccgactcc agacgttccc aacggcagcg 3421 gggctatgag aatgattcac gctatgaaac cgaagagtct acacgttttg atgcgcgcaa 3481 agaatcatct cgccgcagca tgcgtcattc ggaggccgcg gagcgtaatc gtcgtggtga 3541 tcgcagtgat caaggtggcg aatatgagga ttatcctcgc aaaggacaag gctatcgttc 3601 ttctaagcgt tctggcgaaa actatgaatc tgatcgtagg gacagaagac gcggcggcga 3661 tgactatgac aatacaatcg aaagacggcg tcgcagcgat aaacatcgtg accgtgatcc 3721 ccgttacaat gatcctcgct atgatccacg cgaatatgaa gaatatcgca aacatagttc 3781 gcgtaatgct cgtgacagtg atttggagaa agaaggtggc ggcggtggag gaccaccacg 3841 ttctggcaga atgcatcatg atggccgtca tgctgctgcc atgtatggtg gttaccctgg 3901 cggaggatac tatgatccat ataccgccta ctactatcaa caaatggcac gcaacaatcc 3961 ccaagcctat gccgaatggt ataagaaata ctatggccaa catgctgctg ccgtgacagc 4021 tggttctacg caggcaatgc cagccagcgc agacacctca ttgaccgctg cagccaatga 4081 tggacgtgaa tcggtgcact ctggacgcag ttcagctcat aatgatttaa aagataggta 4141 tacccatgcc tacataacac aagccaatga atatcatcgc cattaccacc atcaccaaca 4201 acaacaacag catcatcatc aacaattgca acaacatcat caccaccaac accatctcca 4261 acaaatggca ttcaatcaga cacacaattc gaccatgttg gtggatgagg actcattgaa 4321 tcaaagcact agtttatata gtggcattgg cggcggtggt ggcctttcac aggcccattc 4381 ccaaacgaat ctttcgcaaa ttcatggcgg ttactatgta acgccctcgg tcctacaaac 4441 agcagcagca gcaggagctc atgcaacgcc atctctctat tatgcacgtt ctgattatgc 4501 ggaatcaaga tctggtgcta tatccgtgcg cgatccagat cccatagcat cggagccaca 4561 acgtttaaca ccttgcaaat ttatcaatga gcatgcagtg gtgagttttg gctcaggcat 4621 tttggtaacg gtcaaaccaa aatacacacc acatggtcag atcagtaaca tagtgaagct 4681 gttgaagttt aagcccaatg atgagaccag aaaattattc aaagtcttcc caggaccttt 4741 ggtcagaggt ttaacacaca agaaaacggt tatagaattt tgccaggagc aaatacgttt 4801 gggacccatg gagacaacca tatatgccaa acaattgatt agcaataatg cagagaaata 4861 tagggcctcc tataccttaa tgtggaatct attgatattg ctgttgaaac agaatgggat 4921 ggttgtgggc actgacattg ctgaattgct attgaaaaat caacaacaat ttgcctatca 4981 aacacccaac aattctatga acaattctct aaaatctaaa tcgggtagca cttcccctgt 5041 ggcggaggac aatgaggcaa tcaaagatga tgctgatatt gcaaataatg aagagtctaa 5101 agaagataaa gaccaagagt tacgagaatc ctcggaagaa aaaatgccct cctccagctc 5161 aaacgctttg agtgaaacag aaattaccga gaaatttaga aactatttgt tgtatggcaa 5221 tgtcaatgag gccttggaat gggccaccga taataatttg tggggtcatg cattattctt 5281 ggcctctaaa ttggatcgtc gttcgcatgc caatgttatg atgaagtttg ccaataaatt 5341 ggctttaaat gaccctctgc agacgctcta tcaattgatg agtggtcgtt caccttcaag 5401 tgtgacctgt gtacaggatg aaaaatgggg tgattggcgt cctcatctat ccatgatttt 5461 atcgaatact tcacaaaaac cagaattgga tcgtaaggcc attacgactt tgggtgattc 5521 cctattcaat cgtggcgatt tgtatgcagc ccatttttgt tatctaatgg cgcaagttgg 5581 ttttggacgc tatcaggagt cggcaacaca ggagaataca ttgcaacagc atttgccaaa 5641 attggttttg ttgggctcct ctcactacaa acaattccaa gagtttgctc acaacgaagc 5701 gattgtcatg actgaaatct atgaatatgc ctgttccttg aatgatgata aattttcaat 5761 tgtagagttt cagccttata aattcatttt ggccacacgt ttattggact atggtttcca 5821 tttgaagagt ttaatgtatt tggaacaaat ttctgtacac attgcacggg atccaacgaa 5881 atatgagagt agtttcatca acaaggtcta tgaaatggca gatcgtttga agtactacga 5941 tccagtctta gaaaaaacca tagatgatca gcaacaacta ggcaacgagg aaggagataa 6001 tgccctaaac acctcacaac aacaattgga ggaacaaaaa tggttgcaaa gtctaaggca 6061 aatggctcaa caatataaaa ttgattatgc tgtgccagcg aactcggctg tggacagtca 6121 gcagcaacaa gtgatggatc ccagttttgg ttatcaacaa caacatatag atcaacaatt 6181 tatggaaatc aataaacaat tcagtgaatt gaatctgcaa tatcaagatc agcagcagca 6241 acaaccacaa ccacaacaac agccaacatt ttacaatcca gacttaatgc aacaacaacc 6301 gcagcaaacc caaaatagca tgttggccac ggatgcccaa caacaaccat tatctttgga 6361 tccctatcag acacaaaacg aaatgcctgc catgcaggcc aatgaacagc aacagacatt 6421 agatgccaac caatcatcaa caacggctca aactgatgtt tatcatcagc agacggccgc 6481 ctatatgcag cccgatatga caagctatgg tcaaaattat tatgatccca ctcagcagca 6541 gcaaggacta caaaactaca ataatgaagg cggccatatg gatgcaacac aaacgactga 6601 tagtggctct tatgattatt gggctcaaca gcaacaacaa gttactacag cacagcctta 6661 cggcttggat gagcagcatg aatcacctcc tcatgcacaa acccaagctt tggaaggcca 6721 aaagtcagct gccaccccca aaaacagcac caacaacagc caaggggagg cggtaagggc 6781 agcagctgca acacctaaag ccactttact tttgaataat aaaaaatccc aattgaaaat 6841 gaaaactaac cataatatga tgatgcatgc ctcacccggt catttgagtt cccaatataa 6901 taaggccaaa ttggaaaagg tctcgaaatt aacaacgacg atattggcca acaccaacag 6961 ctctaaaact aatttccctg ttaagaaatc cccagaggtg tcaaccaaac aagcatttaa 7021 taaattatta gaatatgaaa cctcctcaac cccctccaac acacagacca ccttggcagc 7081 aacagcaacg actacaactc ctttttccat aaacaataat gcaagaccaa caatatcgat 7141 gccaaaatcc aaaacctacg atacagatga tgaaagttcg ggcaaaaagc agcaagcaat 7201 tggtgggggc caaaaatcaa caacgggcag tgaaggtaaa ataatgcaac aacaaacagc 7261 gcaaaagaat aaggaaaata aaaataatgc tgctggaaac caaaattctg gctggtttgg 7321 tggcatttgg aataagtttt ccttgaaacc caaaaatcaa atgattttgc ctgatgataa 7381 gaatccctct attgtctggg atcctgagaa aaagaaatgg gtcaacactg atggtgatga 7441 gcaagaggag gaatcgttta agcctcctcc caaaatgggt gatatgatga tgatgtcaca 7501 agcaaatctt gcgccaccac aaagtcaacc tcaacagaat caaatgccaa gcttcatgga 7561 tcctcaacaa caacagcagc aacaatatgt gcctacatcc ctacctaatt cagcgtcatc 7621 accgaatccc atgcaacaac aacaacaaca gcaaacatca gcacaatcca atgtgacggc 7681 ggcgacgaat ccaaatgccc caggacctac gaaaactccc acattacagt caaatatgtt 7741 taaaatgcaa agaaatcgaa ctttaaaaaa cgcttacgtt gacgttttta atccctctgg 7801 tgctcctgta aataaggctg ctgaaaatgt tctcgctcct gctttacctc ctgccgcagt 7861 gcctcaaagt ggatttttca taccaggcgg ctcagggtca acagctggtg gtgttagtca 7921 agataataat ggctatcagc agcaacaaca accacaagat acgccacagt tttacaatcc 7981 caatcaatat gggaccggta ctggttatta aaacaaagga gttttataac attttgtttg 8041 tttgttaaag actctgattt ttttt