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LOCUS XM_013249403 8067 bp mRNA linear INV 02-SEP-2023 (LOC106085249), transcript variant X1, mRNA. ACCESSION XM_013249403 VERSION XM_013249403.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249403.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8067 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8067 /gene="LOC106085249" /note="uncharacterized LOC106085249; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085249" CDS 16..8013 /gene="LOC106085249" /codon_start=1 /product="uncharacterized protein LOC106085249 isoform X1" /protein_id="XP_013104857.2" /db_xref="GeneID:106085249" /translation="MSWVHHHKPSTSSTNNTSSLLTSSSSLSSLAKTANPCSTAQQNF NINASTMPTSPMAAANVAQKQVLPPPTRPPFSSSSSASSLTATSVLRSQATSNNSSLL MTSQQYPNKTNLHTTTNSTMPSMRLSNTSNAPYTLAQQPQQQQRQQYIPPTATPQYGT PNNNTSTTNNHLVQGPFNNNQQNSWQTHSVTSQNYLPTSKMMPQMQPPLPTVGATNAG ANNNWQSGQQNYQSSNMMYQQHAGGVAPQQHQQHQQQQWPQQNSAVNQQMYDNSFNHQ QQQVSNNAYQQQQQQQAAAASYFQQAAAPQPQQQQQPLQTSLTNMSQTTTTNAVNFFD NANNNNNNNQSTGDGWGDWDWNDNSTIEANESAIQHQQQQQQQQISTQMHHPPQSQQQ TQPPPPTAVAAPPPLPAVANDHNQAFNSSNIIADSFNQQSNDTWNWNATNAAVENVPA HVENKTALAKVEQQHNDNWNWTTTNEEDTQPQQQQQQQQTVVTNDHASNDNWNWSSNE TNQQQIAQTTSTVQDIKQAVQPASKSVEAAAIMPLAPPPTEFSSSAVSENHNYNTNAA PQTSTSTNIPNTVFVSQAKPVTLPSRQYASPPMGNTPVSENPPTEGTALMPPQAFQNA EEAAVSRPTNLQSPALPPPTTTVPPPAGLPPAATAAAAGNPFKRSGLAQHHRATALMP TMPQASPAVFNMPPPPPADFANPSSSSNVTLMEPENNEIPSQENQEILAPPAAIMQPS LQPPTSTISLPNAATVAQPPNDERNQYLQTSHLSENSEDQQPEADGLLPPPGLSRLVL GEPELEASQRMVMGTDAPVLGSNATVADVMHLEERHADGEDTASENAVPVISGAMGGV GGQGSPPSTSDRNLYLVPGESNVNNQQRVVTGVELQEQREIEMDGENLEDQQQQQQQQ QQQNHHHQQPQQQQHHNHHQPSPQTHQTLSPEARNEPPVEGAADIIEPSVPAPSVSQP LEQASDAHHHPHQPSKTKESHNNISSPNDDDDSDERLLNERAMDHSTAGSSKSRTKYD NERYGGRVRRSLNRYAAYASDEYVNSDGDGDYSSDREERERRERNDRRRNYREGSVRS DRGGDEDESKRNRRQQRDKRDKYYYEGEERPRAGERSKTDSRRSQRQRGYENDSRYET EESTRFDARKESSRRSMRHSEAAERNRRGDRSDQGGEYEDYPRKGQGYRSSKRSGENY ESDRRDRRRGGDDYDNTIERRRRSDKHRDRDPRYNDPRYDPREYEEYRKHSSRNARDS DLEKEGGGGGGPPRSGRMHHDGRHAAAMYGGYPGGGYYDPYTAYYYQQMARNNPQAYA EWYKKYYGQHAAAVTAGSTQAMPASADTSLTAAANDGRESVHSGRSSAHNDLKDRYTH AYITQANEYHRHYHHHQQQQQHHHQQLQQHHHHQHHLQQMAFNQTHNSTMLVDEDSLN QSTSLYSGIGGGGGLSQAHSQTNLSQIHGGYYVTPSVLQTAAAAGAHATPSLYYARSD YAESRSGAISVRDPDPIASEPQRLTPCKFINEHAVVSFGSGILVTVKPKYTPHGQISN IVKLLKFKPNDETRKLFKVFPGPLVRGLTHKKTVIEFCQEQIRLGPMETTIYAKQLIS NNAEKYRASYTLMWNLLILLLKQNGMVVGTDIAELLLKNQQQFAYQTPNNSMNNSLKS KSGSTSPVAEDNEAIKDDADIANNEESKEDKDQELRESSEEKMPSSSSNALSETEITE KFRNYLLYGNVNEALEWATDNNLWGHALFLASKLDRRSHANVMMKFANKLALNDPLQT LYQLMSGRSPSSVTCVQDEKWGDWRPHLSMILSNTSQKPELDRKAITTLGDSLFNRGD LYAAHFCYLMAQVGFGRYQESATQENTLQQHLPKLVLLGSSHYKQFQEFAHNEAIVMT EIYEYACSLNDDKFSIVEFQPYKFILATRLLDYGFHLKSLMYLEQISVHIARDPTKYE SSFINKVYEMADRLKYYDPVLEKTIDDQQQLGNEEGDNALNTSQQQLEEQKWLQSLRQ MAQQYKIDYAVPANSAVDSQQQQVMDPSFGYQQQHIDQQFMEINKQFSELNLQYQDQQ QQQPQPQQQPTFYNPDLMQQQPQQTQNSMLATDAQQQPLSLDPYQTQNEMPAMQANEQ QQTLDANQSSTTAQTDVYHQQTAAYMQPDMTSYGQNYYDPTQQQQGLQNYNNEGGHMD ATQTTDSGSYDYWAQQQQQVTTAQPYGLDEQHESPPHAQTQALEGQKSAATPKNSTNN SQGEAVRAAAATPKATLLLNNKKSQLKMKTNHNMMMHASPGHLSSQYNKAKLEKVSKL TTTILANTNSSKTNFPVKKSPEVSTKQAFNKLLEYETSSTPSNTQTTLAATATTTTPF SINNNARPTISMPKSKTYDTDDESSGKKQQAIGGGQKSTTGSEGKIMQQQTAQKNKEN KNNAAGNQNSGWFGGIWNKFSLKPKNQMILPDDKNPSIVWDPEKKKWVNTDGDEQEEE SFKPPPKMGDMMMMSQANLAPPQSQPQQNQMPSFMDPQQQQQQQYVPTSLPNSASSPN PMQQQQQQQTSAQSNVTAATNPNAPGPTKTPTLQSNMFKMQRNRTLKNAYVDVFNPSG APVNKAAENVLAPALPPAAVPQSGFFIPGGSGSTAGGVSQDNNGYQQQQQPQDTPQFY NPNQYGTGTGY" polyA_site 8067 /gene="LOC106085249" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgaataagg ccaacatgtc ttgggtacat catcacaaac catctacatc atcaacaaac 61 aacacatcat cacttttaac atcatcatca tcattatcct ctttagcgaa aactgcaaat 121 ccttgttcaa cagctcagca aaatttcaat attaatgcct caaccatgcc tacttctccc 181 atggctgctg caaatgtagc ccagaaacag gtgttgccgc caccaacgcg tccacctttt 241 tcctcgtcgt catctgcatc atcattaaca gcaacatctg tactgaggtc tcaggctact 301 tcgaataatt cttctctctt gatgacgtca caacaatatc caaataaaac gaatttacat 361 acgaccacaa atagcaccat gccgtcaatg cgtttaagta atacttcaaa tgctccttat 421 acgctggcac aacaaccgca acagcagcag cgtcaacagt atataccacc cactgctaca 481 ccacaatatg gtactcccaa taacaatacc agcacaacca acaatcatct ggtacaaggg 541 ccatttaata ataatcaaca gaattcgtgg caaacacatt ctgtaacttc acaaaattat 601 ttgccaacat caaaaatgat gccacaaatg caacctccat tgccaacagt gggagcaaca 661 aatgctgggg caaataacaa ttggcaaagt ggacagcaaa attatcagag cagtaatatg 721 atgtatcaac agcatgcagg tggtgtagcg ccacaacaac accagcaaca tcaacagcaa 781 caatggccgc agcaaaattc ggctgtcaat cagcagatgt atgataattc attcaatcat 841 cagcagcaac aggtcagcaa taatgcgtat caacaacaac aacagcaaca agcagctgca 901 gcctcatatt ttcaacaagc tgcagcacca caaccccaac aacagcaaca accactacaa 961 acatcattaa ccaacatgtc acaaacaaca acaacaaatg cagtcaattt ctttgacaat 1021 gccaataata acaacaacaa caaccaatct accggtgatg gttggggtga ttgggattgg 1081 aatgataact ctactataga agccaatgag agcgctattc aacatcagca gcagcagcag 1141 cagcagcaaa tctctactca aatgcatcat ccaccacaat cacagcaaca aactcaacca 1201 ccacccccaa cagcagtagc cgcaccacca ccactacctg ctgttgctaa cgaccacaat 1261 caggcattta attcttctaa cattattgct gatagtttta atcagcaatc aaatgatact 1321 tggaattgga atgctaccaa tgctgcagtt gagaatgtgc cagctcatgt tgagaataaa 1381 acggcactgg caaaggtaga gcagcagcat aatgacaatt ggaattggac aaccacgaac 1441 gaggaggaca ctcagcctca gcagcaacaa caacaacaac aaacagttgt tacgaacgat 1501 cacgccagca acgataattg gaattggtca tcgaacgaaa cgaatcagca acaaattgca 1561 caaacaacat ctacggtgca ggatatcaag caagctgttc agccagcttc aaaatctgta 1621 gaagccgccg ccatcatgcc cttagcacca cctccaacgg aattttcttc gagtgctgta 1681 tcggaaaatc acaactataa cacaaatgca gcacctcaaa catcgacatc aactaacatt 1741 ccaaacacag tatttgtgtc gcaagccaaa ccggtgacct tgccctctcg gcaatatgcc 1801 tcgcctccca tgggcaatac tccggtcagt gaaaaccctc ccacagaggg tactgcatta 1861 atgcctcccc aggccttcca aaatgccgag gaggcagctg ttagcagacc aactaatttg 1921 caatcacctg ctttgccgcc accaacaacc actgttcctc cacccgccgg tttgcctcct 1981 gcagcaacag cggctgcagc tggaaatcca tttaaacgtt cgggtttggc tcaacatcat 2041 cgtgctactg ctttaatgcc cactatgcca caagctagtc ctgctgtttt taatatgccg 2101 ccgccaccgc cagcagattt tgcgaatccc tcatcatcgt ccaatgtaac actgatggag 2161 cccgaaaaca atgaaattcc ctcacaagaa aatcaagaaa ttttggctcc ccctgcagcc 2221 ataatgcaac cgtcattgca accaccaacc tccaccatta gtttgccaaa tgctgctaca 2281 gtggcacagc ctcctaatga tgaacgcaat caatatctgc agaccagtca tctatcggaa 2341 aattccgaag atcaacagcc tgaagcggat ggccttttac cacctccagg tttatcgcgt 2401 ttggttttgg gcgaaccaga attggaggcc tcacaaagga tggttatggg tactgatgcg 2461 cctgtgctgg gtagtaatgc caccgtggca gatgttatgc atttggaaga gcgtcatgca 2521 gatggcgagg atacagcttc agaaaatgca gtgcctgtta taagtggtgc gatgggtggt 2581 gttggcggac aaggttctcc cccctccaca tccgatcgta atctgtattt ggtccctggc 2641 gaaagcaatg tcaataacca acaacgagtt gtcactggag tggagttgca agagcaaaga 2701 gaaatcgaaa tggatggtga aaatcttgaa gatcagcaac aacaacaaca acaacagcag 2761 cagcaaaacc atcatcatca gcagccgcaa caacagcagc atcataacca tcatcagcca 2821 tctccccaaa ctcatcaaac tctatcgcct gaagctcgca atgaacctcc tgttgaggga 2881 gccgctgaca ttattgagcc ttctgtgcct gcacctagcg taagtcaacc tttggagcaa 2941 gcctccgatg cacatcatca tccccatcag ccctcaaaaa ccaaggaatc gcataataat 3001 atttcttcgc ccaatgatga cgatgacagc gatgagcgcc ttctcaatga acgagccatg 3061 gaccatagca ctgccggttc ttcaaagtct cgcacgaaat atgacaatga acgctacggg 3121 ggtcgcgtta gacgttcctt gaatcgttat gcagcttatg catctgacga atatgtgaat 3181 agcgatggtg atggtgacta ttccagtgac cgcgaagaac gtgaacgtag ggaaagaaat 3241 gatcgtcgtc gtaattatcg tgagggtagt gtacgcagtg atcgcggcgg agacgaagac 3301 gagagcaaac gtaatcgccg tcagcaacgt gataaacgtg acaaatacta ttacgaaggc 3361 gaggaacgcc caagggcagg cgaacgttcc aagaccgact ccagacgttc ccaacggcag 3421 cggggctatg agaatgattc acgctatgaa accgaagagt ctacacgttt tgatgcgcgc 3481 aaagaatcat ctcgccgcag catgcgtcat tcggaggccg cggagcgtaa tcgtcgtggt 3541 gatcgcagtg atcaaggtgg cgaatatgag gattatcctc gcaaaggaca aggctatcgt 3601 tcttctaagc gttctggcga aaactatgaa tctgatcgta gggacagaag acgcggcggc 3661 gatgactatg acaatacaat cgaaagacgg cgtcgcagcg ataaacatcg tgaccgtgat 3721 ccccgttaca atgatcctcg ctatgatcca cgcgaatatg aagaatatcg caaacatagt 3781 tcgcgtaatg ctcgtgacag tgatttggag aaagaaggtg gcggcggtgg aggaccacca 3841 cgttctggca gaatgcatca tgatggccgt catgctgctg ccatgtatgg tggttaccct 3901 ggcggaggat actatgatcc atataccgcc tactactatc aacaaatggc acgcaacaat 3961 ccccaagcct atgccgaatg gtataagaaa tactatggcc aacatgctgc tgccgtgaca 4021 gctggttcta cgcaggcaat gccagccagc gcagacacct cattgaccgc tgcagccaat 4081 gatggacgtg aatcggtgca ctctggacgc agttcagctc ataatgattt aaaagatagg 4141 tatacccatg cctacataac acaagccaat gaatatcatc gccattacca ccatcaccaa 4201 caacaacaac agcatcatca tcaacaattg caacaacatc atcaccacca acaccatctc 4261 caacaaatgg cattcaatca gacacacaat tcgaccatgt tggtggatga ggactcattg 4321 aatcaaagca ctagtttata tagtggcatt ggcggcggtg gtggcctttc acaggcccat 4381 tcccaaacga atctttcgca aattcatggc ggttactatg taacgccctc ggtcctacaa 4441 acagcagcag cagcaggagc tcatgcaacg ccatctctct attatgcacg ttctgattat 4501 gcggaatcaa gatctggtgc tatatccgtg cgcgatccag atcccatagc atcggagcca 4561 caacgtttaa caccttgcaa atttatcaat gagcatgcag tggtgagttt tggctcaggc 4621 attttggtaa cggtcaaacc aaaatacaca ccacatggtc agatcagtaa catagtgaag 4681 ctgttgaagt ttaagcccaa tgatgagacc agaaaattat tcaaagtctt cccaggacct 4741 ttggtcagag gtttaacaca caagaaaacg gttatagaat tttgccagga gcaaatacgt 4801 ttgggaccca tggagacaac catatatgcc aaacaattga ttagcaataa tgcagagaaa 4861 tatagggcct cctatacctt aatgtggaat ctattgatat tgctgttgaa acagaatggg 4921 atggttgtgg gcactgacat tgctgaattg ctattgaaaa atcaacaaca atttgcctat 4981 caaacaccca acaattctat gaacaattct ctaaaatcta aatcgggtag cacttcccct 5041 gtggcggagg acaatgaggc aatcaaagat gatgctgata ttgcaaataa tgaagagtct 5101 aaagaagata aagaccaaga gttacgagaa tcctcggaag aaaaaatgcc ctcctccagc 5161 tcaaacgctt tgagtgaaac agaaattacc gagaaattta gaaactattt gttgtatggc 5221 aatgtcaatg aggccttgga atgggccacc gataataatt tgtggggtca tgcattattc 5281 ttggcctcta aattggatcg tcgttcgcat gccaatgtta tgatgaagtt tgccaataaa 5341 ttggctttaa atgaccctct gcagacgctc tatcaattga tgagtggtcg ttcaccttca 5401 agtgtgacct gtgtacagga tgaaaaatgg ggtgattggc gtcctcatct atccatgatt 5461 ttatcgaata cttcacaaaa accagaattg gatcgtaagg ccattacgac tttgggtgat 5521 tccctattca atcgtggcga tttgtatgca gcccattttt gttatctaat ggcgcaagtt 5581 ggttttggac gctatcagga gtcggcaaca caggagaata cattgcaaca gcatttgcca 5641 aaattggttt tgttgggctc ctctcactac aaacaattcc aagagtttgc tcacaacgaa 5701 gcgattgtca tgactgaaat ctatgaatat gcctgttcct tgaatgatga taaattttca 5761 attgtagagt ttcagcctta taaattcatt ttggccacac gtttattgga ctatggtttc 5821 catttgaaga gtttaatgta tttggaacaa atttctgtac acattgcacg ggatccaacg 5881 aaatatgaga gtagtttcat caacaaggtc tatgaaatgg cagatcgttt gaagtactac 5941 gatccagtct tagaaaaaac catagatgat cagcaacaac taggcaacga ggaaggagat 6001 aatgccctaa acacctcaca acaacaattg gaggaacaaa aatggttgca aagtctaagg 6061 caaatggctc aacaatataa aattgattat gctgtgccag cgaactcggc tgtggacagt 6121 cagcagcaac aagtgatgga tcccagtttt ggttatcaac aacaacatat agatcaacaa 6181 tttatggaaa tcaataaaca attcagtgaa ttgaatctgc aatatcaaga tcagcagcag 6241 caacaaccac aaccacaaca acagccaaca ttttacaatc cagacttaat gcaacaacaa 6301 ccgcagcaaa cccaaaatag catgttggcc acggatgccc aacaacaacc attatctttg 6361 gatccctatc agacacaaaa cgaaatgcct gccatgcagg ccaatgaaca gcaacagaca 6421 ttagatgcca accaatcatc aacaacggct caaactgatg tttatcatca gcagacggcc 6481 gcctatatgc agcccgatat gacaagctat ggtcaaaatt attatgatcc cactcagcag 6541 cagcaaggac tacaaaacta caataatgaa ggcggccata tggatgcaac acaaacgact 6601 gatagtggct cttatgatta ttgggctcaa cagcaacaac aagttactac agcacagcct 6661 tacggcttgg atgagcagca tgaatcacct cctcatgcac aaacccaagc tttggaaggc 6721 caaaagtcag ctgccacccc caaaaacagc accaacaaca gccaagggga ggcggtaagg 6781 gcagcagctg caacacctaa agccacttta cttttgaata ataaaaaatc ccaattgaaa 6841 atgaaaacta accataatat gatgatgcat gcctcacccg gtcatttgag ttcccaatat 6901 aataaggcca aattggaaaa ggtctcgaaa ttaacaacga cgatattggc caacaccaac 6961 agctctaaaa ctaatttccc tgttaagaaa tccccagagg tgtcaaccaa acaagcattt 7021 aataaattat tagaatatga aacctcctca accccctcca acacacagac caccttggca 7081 gcaacagcaa cgactacaac tcctttttcc ataaacaata atgcaagacc aacaatatcg 7141 atgccaaaat ccaaaaccta cgatacagat gatgaaagtt cgggcaaaaa gcagcaagca 7201 attggtgggg gccaaaaatc aacaacgggc agtgaaggta aaataatgca acaacaaaca 7261 gcgcaaaaga ataaggaaaa taaaaataat gctgctggaa accaaaattc tggctggttt 7321 ggtggcattt ggaataagtt ttccttgaaa cccaaaaatc aaatgatttt gcctgatgat 7381 aagaatccct ctattgtctg ggatcctgag aaaaagaaat gggtcaacac tgatggtgat 7441 gagcaagagg aggaatcgtt taagcctcct cccaaaatgg gtgatatgat gatgatgtca 7501 caagcaaatc ttgcgccacc acaaagtcaa cctcaacaga atcaaatgcc aagcttcatg 7561 gatcctcaac aacaacagca gcaacaatat gtgcctacat ccctacctaa ttcagcgtca 7621 tcaccgaatc ccatgcaaca acaacaacaa cagcaaacat cagcacaatc caatgtgacg 7681 gcggcgacga atccaaatgc cccaggacct acgaaaactc ccacattaca gtcaaatatg 7741 tttaaaatgc aaagaaatcg aactttaaaa aacgcttacg ttgacgtttt taatccctct 7801 ggtgctcctg taaataaggc tgctgaaaat gttctcgctc ctgctttacc tcctgccgca 7861 gtgcctcaaa gtggattttt cataccaggc ggctcagggt caacagctgg tggtgttagt 7921 caagataata atggctatca gcagcaacaa caaccacaag atacgccaca gttttacaat 7981 cccaatcaat atgggaccgg tactggttat taaaacaaag gagttttata acattttgtt 8041 tgtttgttaa agactctgat ttttttt