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LOCUS XM_013249344 1982 bp mRNA linear INV 02-SEP-2023 (LOC106085217), transcript variant X3, mRNA. ACCESSION XM_013249344 VERSION XM_013249344.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249344.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1982 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1982 /gene="LOC106085217" /note="zinc finger protein 660; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085217" CDS 84..1850 /gene="LOC106085217" /codon_start=1 /product="zinc finger protein 660 isoform X3" /protein_id="XP_013104798.1" /db_xref="GeneID:106085217" /translation="MVCRLCLKAIPSESVIKLYQDLNCATEALEMVKHIEKYLDIEVR QDDVVSTMICQDCHDHLEEFHKFYQDVKGKQCTLHNNFLEVELKEESHDSRDVDVKNN DDSNKVDGNDKISNVAKEIEQAMFESPIDIMKTEADDEKDEQEVIATDVLDDDVDLDK EDVFADDGVDIDSADLQSSEDDVPLINLKTKKKITLKRKYTTKGTPKEPKERKQRREP RERKEPKEPKERKERKVPKERKEPKEPRKKGERKKNLSAQELIATSMELKCDICQVQV NTWKELRQHFLLAHTRTPYIKCCDTVYEKQRPLADHLQWHKNPDAFKCKMCNEVLSNS RDLTSHISSQHPDNVDILENYECEHCFKQFRNYTIFKNHLRTHSKDKDVECQICNKRC ATIYRLRSHIESVHNNVYHHICDICGKKFKSKTAFQKHYEEHQGIVEPAAQCSICEAW LKNRYSLKVHLTIHEKAEFSCDVCGKMFNTKKNLSRHKGYWHRLEKNLKCSYCDKIFR EKRNLNEHMATHTETQLYACPHCGKESRSKSNMYVHVKKQHPDEWWKSKQERYNIKPE TENTKTTEIENNSITKEVENPQ" misc_feature 87..323 /gene="LOC106085217" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; smart00868" /db_xref="CDD:214871" misc_feature 978..1031 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1053..1115 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1068..1070,1074..1076,1080..1082,1086..1091, 1098..1103,1110..1112,1167..1169,1173..1175,1185..1190, 1197..1202,1209..1211,1251..1253,1257..1259,1263..1265, 1269..1274,1281..1286) /gene="LOC106085217" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1152..1214 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1236..1289 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1413..1475 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1494..1559 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1509..1511,1515..1517,1521..1523,1527..1532, 1539..1544,1554..1556,1596..1598,1602..1604,1614..1619, 1626..1631,1638..1640,1680..1682,1686..1688,1692..1694, 1698..1703,1710..1715) /gene="LOC106085217" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1581..1643 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1665..1721 /gene="LOC106085217" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 taagatagaa agaagaaaat atacacatcc cattttcttg gtgtccgaga caaaaaattg 61 caaattggaa aaataccaat aaaatggttt gccgtttgtg tctaaaagca attcctagtg 121 aatctgtaat aaaattatac caagatttaa actgtgcaac tgaagcactc gaaatggtaa 181 aacatattga aaagtaccta gatattgagg ttaggcaaga tgatgttgtc tccacaatga 241 tatgtcagga ttgccatgac cacttggagg aatttcataa attctatcaa gacgtgaaag 301 ggaagcaatg tacacttcat aacaattttc tggaagttga gcttaaagaa gaaagtcatg 361 atagccggga tgtcgatgtt aagaacaatg acgatagcaa caaagtggat ggtaatgata 421 agattagcaa cgttgccaag gaaatcgaac aagcaatgtt cgaaagtcct attgatatca 481 tgaaaaccga ggcagatgat gaaaaggatg agcaagaagt gatagcaacg gatgtgctag 541 atgatgatgt ggatttggat aaagaggacg tgtttgcgga tgacggtgtt gacattgaca 601 gcgccgattt acaatcatca gaggacgatg tacctttaat aaacttgaaa actaagaaga 661 aaatcacatt aaagcgaaaa tacacaacaa agggcacgcc gaaagaacca aaagaacgca 721 agcaacgcag agaaccaaga gaacgcaagg aaccaaaaga acctaaggaa cggaaagaac 781 gtaaagtgcc aaaggagaga aaagaaccaa aagaacccag aaagaaaggc gaaagaaaaa 841 agaatctatc agcgcaagag cttatagcaa cttcaatgga attaaaatgt gacatttgtc 901 aagttcaagt taacacatgg aaagaattaa gacaacactt tttattggct cacacgcgta 961 caccttacat aaaatgttgt gatacagttt atgaaaaaca acggcccttg gccgatcatc 1021 ttcaatggca caaaaatccc gatgcattca aatgcaaaat gtgcaatgag gtactatcta 1081 attccagaga tttgacctct cacattagca gccaacatcc tgataatgtc gatatacttg 1141 aaaattatga gtgcgaacat tgttttaaac aattccgtaa ttacacaata ttcaaaaatc 1201 atttacgtac ccacagcaaa gacaaagacg ttgaatgcca aatatgcaac aaaagatgtg 1261 ccactattta ccgcttgcgt agtcacatcg aatccgtgca caataatgtt tatcaccata 1321 tttgtgatat atgcgggaaa aagttcaaat cgaaaacggc ctttcaaaaa cactatgagg 1381 aacatcaggg catcgttgaa ccggccgccc agtgttccat atgcgaggca tggcttaaaa 1441 atcgttacag tcttaaagtg catttaacca tacacgaaaa agccgaattc tcatgtgacg 1501 tttgtgggaa aatgttcaac accaagaaga atttgagtcg ccacaaaggc tattggcatc 1561 gattggagaa aaatcttaaa tgtagctatt gcgataaaat atttcgtgag aaaagaaatc 1621 tcaacgaaca tatggcgaca catactgaga cacagctata tgcttgcccc cattgtggca 1681 aagaatcacg ttccaaatcg aacatgtatg tgcatgtaaa aaaacaacat cccgacgaat 1741 ggtggaaatc gaaacaagaa cgttataaca ttaaaccgga aacggaaaat acaaaaacaa 1801 ctgagatcga aaacaatagt ataacaaaag aagttgaaaa tccccaataa atgtggagtg 1861 aaaggaagca aaagaagaag ctgtattttt gttaactttt taattttcac ctagcataga 1921 gacaatattt aatgtgcttt ttttaaatga taaatatata tgtatatatg gcattttatg 1981 ca