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LOCUS XM_013249316 3201 bp mRNA linear INV 02-SEP-2023 (LOC106085189), transcript variant X3, mRNA. ACCESSION XM_013249316 VERSION XM_013249316.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249316.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3201 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3201 /gene="LOC106085189" /note="uncharacterized LOC106085189; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085189" CDS 544..1830 /gene="LOC106085189" /codon_start=1 /product="uncharacterized protein LOC106085189" /protein_id="XP_013104770.1" /db_xref="GeneID:106085189" /translation="MVAAGLKQQLRGNRCYVSLACSIGSISLAAGSFLQIPNTTDRIS FQRGLFLSSLGFIYFISLTDFCNKYLLETSHGIKFRKKYRLMMSDILDMTNKIVSAIQ ASFSFLVGLIVCKSTCSKTFVYASHCLMEGYGWFGTAYFMYDIWSMYQVHTQKIADKL KLMKITSSASFTPKPIANGQSNGGLYDKHIARTFGANGKRLKALAESTDTNGNDDMQH IRHHEDEIYDYDGETVQIPENGKWGFFKYLITHPVMMIHHIFVGTVGFLVVTYIRGGG HCIYSYMFMMEFSTPFVSLRSILSTLGLKETRTYIINGLVMLFSFFVCRVIMWPYVMW RYSVEINVTFLQAIVGLPIGCIFGILVLFLPQLYWFFLMSKGAMKVFFPKKSSSKHVP INGAAVTNGKSSALQNGSTTTKYTTNGSLKKSEITT" misc_feature <1294..1686 /gene="LOC106085189" /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC; smart00724" /db_xref="CDD:214789" polyA_site 3201 /gene="LOC106085189" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gttgctgctg ctctgcaatt gtgacgaaaa tacgtttgcc gcttgatttt cgtataatat 61 tgaagaagaa gacagcgacg cctatctcgt tttttgttca atgtgaaatg tctactagta 121 tgtgtgcgtg tgcgctgatt aaaaaccagc tgagtgagtg cggacaagtc tcgtgaatgt 181 gcgccttaaa aacaaaaggg tcgttgttag ttgcatttaa ccgtttgttg tcattagaaa 241 acggagattg tgactatacg ataagctgcc gcgagtttta aattcccaaa tgcatttaag 301 caacatgtgt tgaatcaaat acgctcattc aaaaacaaca acctcaaatt ctatcttcct 361 atttttattt gttcttcgta aaagactaac aaaaaattcc agagattcct taaatagtcc 421 ataacgcaac aaacaacgaa ctaagcttcc atttgtcgtc attttgtctc cacaaaagtc 481 tgcccacctt cttccacctt gtcaacaaat tgttttgtgg tgtgagttgt agtgtgtgtc 541 acaatggttg ctgccggcct aaaacaacaa ttacgcggca atcgttgtta tgtctcattg 601 gcctgttcca taggctctat tagcctggct gctggcagct tcttgcaaat acccaatacc 661 acagatcgca tatcctttca gcgtggccta tttctatctt cattgggttt catctatttc 721 atttcattga cggatttctg caacaaatat ttgctggaga caagtcatgg cattaaattt 781 cgcaagaaat accggctcat gatgtcagat atcttggata tgaccaacaa aattgtttcc 841 gcaatacagg cttccttctc attcctggtc ggtttgattg tctgcaaatc gacatgcagc 901 aaaaccttcg tctatgcctc acattgtctt atggagggct atgggtggtt tggtacagca 961 tatttcatgt atgacatttg gtccatgtac caggtgcata cacagaaaat tgccgacaaa 1021 cttaagctaa tgaaaattac ctcctcggcc tcgtttacac ccaaacccat agcaaatggc 1081 cagtcgaatg gtggcctcta tgataagcat attgcgcgta cctttggagc caatggtaaa 1141 cgtttgaaag cgctggccga aagcaccgat accaatggca atgatgatat gcagcatata 1201 cgtcatcatg aggatgaaat ctatgattat gatggtgaga cagtacaaat accagagaat 1261 ggcaaatggg gtttctttaa gtatctcata acacatccgg taatgatgat tcatcatata 1321 tttgtgggca cagtgggatt tttggtagtc acttacattc gcggtggtgg ccattgcatt 1381 tacagttaca tgtttatgat ggaattctcc actccatttg tttcattgcg cagtattcta 1441 agcaccttgg gtctgaagga gacacgtacc tatatcatca atggcctggt tatgctattc 1501 tccttctttg tgtgtcgcgt catcatgtgg ccctatgtca tgtggcgcta tagtgtggag 1561 ataaatgtta catttttaca ggccattgtg ggtttgccca ttggttgtat ttttggtatt 1621 ttggtgttgt tcctgcccca gttatattgg ttctttttga tgtccaaagg ggccatgaag 1681 gtcttctttc ctaaaaaatc gtcgtccaag catgtaccga taaatggcgc tgctgtcacc 1741 aatggcaaat catcagcatt acagaatgga tcaacaacaa caaagtatac gacaaatggt 1801 agcctaaaga aatctgaaat caccacctaa atccagctag tagagcatca acaacgcaac 1861 acaaaacaaa cgaaacacac aaagagaaaa catttatttt gattcttttt ttttggaaat 1921 acaaaagcag cagcaacaat aagaaaacaa aaaatactta tcacaaaata taactaagtc 1981 tgctaaacaa atgatagaaa ctaaaaaata tgaaaaagaa aacttctaac tgttaattac 2041 cattaaagca gatttataga agataaagtc agttggccaa cgtagataaa accgttttag 2101 tgctggtaat gcaggttcca atgtgtgggt tcgttaaaac cgtgcaggct tcaagcctag 2161 ggagcattct agtgaaagtt aaagacaaca ctgaaaaaag attataccgt taacagcaga 2221 taaaaccatg cgtttgagga taatgcagtc ttaaaccaac actgaagtgc tttattttat 2281 taggactgcc gactttatca tttctttctg catatactgc ttttttcaaa caatttattt 2341 acaattttct ttttttatta aatgaaaata aacaaatctt taaaatgttg cttttatctt 2401 taattagttt taaatgcatt tacttttatt ctaaccaaaa tagttcaatt ctccctcata 2461 tacaaaataa ataaaaaaat gggaaaaaca acttattggt tttaaaaact cccaaaaaaa 2521 cacaaagaaa tttttgaatg aagacacaag agattcttta agaattaata attgttatta 2581 ttataattca gcatatgtat cctaaatata caaatgaaac aaagaaagaa aaagccaagc 2641 cccattattg cctgaacaaa ataggtttac ctaataaaat ttcaaaaaac aactgataac 2701 tgattttatt taaaaattgt ttttaaataa actgtataat tttttataaa tatatacatt 2761 taaatttaaa ttttctattt gaatttaaca taacaaaaag acgtttttac cccctcccat 2821 cactcaatcc catggaaatt aaaaaaaaaa acctatacaa ataatagtca taaaccattt 2881 tttaccattt acctacttca tttcattttg tttttattta taattttatc catttgtata 2941 ttgtatgtac tatgtgtaaa aaacataaga aagttgagaa ggttgagaac aagtacgaat 3001 tgtttattaa agtttataaa atatgttaag ctattaacaa atgataaata atgaaataaa 3061 taaaaaatca aaacaagtaa tacataacaa aagacataac atatattcgt ataactctat 3121 ttgagcttgt tgcgtgtgat aatggtcata tgcaaatatt aatgtagtgt gtaacaacaa 3181 caaaaagata aaaaaaaaca a