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LOCUS XM_013249306 3252 bp mRNA linear INV 02-SEP-2023 (LOC106085189), transcript variant X1, mRNA. ACCESSION XM_013249306 VERSION XM_013249306.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249306.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3252 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3252 /gene="LOC106085189" /note="uncharacterized LOC106085189; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085189" CDS 595..1881 /gene="LOC106085189" /codon_start=1 /product="uncharacterized protein LOC106085189" /protein_id="XP_013104760.1" /db_xref="GeneID:106085189" /translation="MVAAGLKQQLRGNRCYVSLACSIGSISLAAGSFLQIPNTTDRIS FQRGLFLSSLGFIYFISLTDFCNKYLLETSHGIKFRKKYRLMMSDILDMTNKIVSAIQ ASFSFLVGLIVCKSTCSKTFVYASHCLMEGYGWFGTAYFMYDIWSMYQVHTQKIADKL KLMKITSSASFTPKPIANGQSNGGLYDKHIARTFGANGKRLKALAESTDTNGNDDMQH IRHHEDEIYDYDGETVQIPENGKWGFFKYLITHPVMMIHHIFVGTVGFLVVTYIRGGG HCIYSYMFMMEFSTPFVSLRSILSTLGLKETRTYIINGLVMLFSFFVCRVIMWPYVMW RYSVEINVTFLQAIVGLPIGCIFGILVLFLPQLYWFFLMSKGAMKVFFPKKSSSKHVP INGAAVTNGKSSALQNGSTTTKYTTNGSLKKSEITT" misc_feature <1345..1737 /gene="LOC106085189" /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC; smart00724" /db_xref="CDD:214789" polyA_site 3252 /gene="LOC106085189" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gttgctgctg ctctgcaatt gtgacgaaaa tacgtttgcc gcttgatttt cgtataatat 61 tgaagaagaa gacagcgacg cctatctcgt tttttgttca atgtgaaatg tctactagta 121 tgtgtgcgtg tgcgctgatt aaaaaccagc tgagtgagtg cggacaagtc tcgtgaatgt 181 gcgccttaaa aacaaaaggg tcgttgttag ttgcatttaa ccgtttgttg tcattagaaa 241 acggagattg tgactatacg ataagctgcc gcgagttttg taataatata taataccgag 301 acaaatattt aaaacgaata tcagcaactt aaattcccaa atgcatttaa gcaacatgtg 361 ttgaatcaaa tacgctcatt caaaaacaac aacctcaaat tctatcttcc tatttttatt 421 tgttcttcgt aaaagactaa caaaaaattc cagagattcc ttaaatagtc cataacgcaa 481 caaacaacga actaagcttc catttgtcgt cattttgtct ccacaaaagt ctgcccacct 541 tcttccacct tgtcaacaaa ttgttttgtg gtgtgagttg tagtgtgtgt cacaatggtt 601 gctgccggcc taaaacaaca attacgcggc aatcgttgtt atgtctcatt ggcctgttcc 661 ataggctcta ttagcctggc tgctggcagc ttcttgcaaa tacccaatac cacagatcgc 721 atatcctttc agcgtggcct atttctatct tcattgggtt tcatctattt catttcattg 781 acggatttct gcaacaaata tttgctggag acaagtcatg gcattaaatt tcgcaagaaa 841 taccggctca tgatgtcaga tatcttggat atgaccaaca aaattgtttc cgcaatacag 901 gcttccttct cattcctggt cggtttgatt gtctgcaaat cgacatgcag caaaaccttc 961 gtctatgcct cacattgtct tatggagggc tatgggtggt ttggtacagc atatttcatg 1021 tatgacattt ggtccatgta ccaggtgcat acacagaaaa ttgccgacaa acttaagcta 1081 atgaaaatta cctcctcggc ctcgtttaca cccaaaccca tagcaaatgg ccagtcgaat 1141 ggtggcctct atgataagca tattgcgcgt acctttggag ccaatggtaa acgtttgaaa 1201 gcgctggccg aaagcaccga taccaatggc aatgatgata tgcagcatat acgtcatcat 1261 gaggatgaaa tctatgatta tgatggtgag acagtacaaa taccagagaa tggcaaatgg 1321 ggtttcttta agtatctcat aacacatccg gtaatgatga ttcatcatat atttgtgggc 1381 acagtgggat ttttggtagt cacttacatt cgcggtggtg gccattgcat ttacagttac 1441 atgtttatga tggaattctc cactccattt gtttcattgc gcagtattct aagcaccttg 1501 ggtctgaagg agacacgtac ctatatcatc aatggcctgg ttatgctatt ctccttcttt 1561 gtgtgtcgcg tcatcatgtg gccctatgtc atgtggcgct atagtgtgga gataaatgtt 1621 acatttttac aggccattgt gggtttgccc attggttgta tttttggtat tttggtgttg 1681 ttcctgcccc agttatattg gttctttttg atgtccaaag gggccatgaa ggtcttcttt 1741 cctaaaaaat cgtcgtccaa gcatgtaccg ataaatggcg ctgctgtcac caatggcaaa 1801 tcatcagcat tacagaatgg atcaacaaca acaaagtata cgacaaatgg tagcctaaag 1861 aaatctgaaa tcaccaccta aatccagcta gtagagcatc aacaacgcaa cacaaaacaa 1921 acgaaacaca caaagagaaa acatttattt tgattctttt tttttggaaa tacaaaagca 1981 gcagcaacaa taagaaaaca aaaaatactt atcacaaaat ataactaagt ctgctaaaca 2041 aatgatagaa actaaaaaat atgaaaaaga aaacttctaa ctgttaatta ccattaaagc 2101 agatttatag aagataaagt cagttggcca acgtagataa aaccgtttta gtgctggtaa 2161 tgcaggttcc aatgtgtggg ttcgttaaaa ccgtgcaggc ttcaagccta gggagcattc 2221 tagtgaaagt taaagacaac actgaaaaaa gattataccg ttaacagcag ataaaaccat 2281 gcgtttgagg ataatgcagt cttaaaccaa cactgaagtg ctttatttta ttaggactgc 2341 cgactttatc atttctttct gcatatactg cttttttcaa acaatttatt tacaattttc 2401 tttttttatt aaatgaaaat aaacaaatct ttaaaatgtt gcttttatct ttaattagtt 2461 ttaaatgcat ttacttttat tctaaccaaa atagttcaat tctccctcat atacaaaata 2521 aataaaaaaa tgggaaaaac aacttattgg ttttaaaaac tcccaaaaaa acacaaagaa 2581 atttttgaat gaagacacaa gagattcttt aagaattaat aattgttatt attataattc 2641 agcatatgta tcctaaatat acaaatgaaa caaagaaaga aaaagccaag ccccattatt 2701 gcctgaacaa aataggttta cctaataaaa tttcaaaaaa caactgataa ctgattttat 2761 ttaaaaattg tttttaaata aactgtataa ttttttataa atatatacat ttaaatttaa 2821 attttctatt tgaatttaac ataacaaaaa gacgttttta ccccctccca tcactcaatc 2881 ccatggaaat taaaaaaaaa aacctataca aataatagtc ataaaccatt ttttaccatt 2941 tacctacttc atttcatttt gtttttattt ataattttat ccatttgtat attgtatgta 3001 ctatgtgtaa aaaacataag aaagttgaga aggttgagaa caagtacgaa ttgtttatta 3061 aagtttataa aatatgttaa gctattaaca aatgataaat aatgaaataa ataaaaaatc 3121 aaaacaagta atacataaca aaagacataa catatattcg tataactcta tttgagcttg 3181 ttgcgtgtga taatggtcat atgcaaatat taatgtagtg tgtaacaaca acaaaaagat 3241 aaaaaaaaac aa