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LOCUS XM_013249298 2984 bp mRNA linear INV 02-SEP-2023 (LOC106085189), transcript variant X2, mRNA. ACCESSION XM_013249298 VERSION XM_013249298.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249298.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2984 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2984 /gene="LOC106085189" /note="uncharacterized LOC106085189; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085189" CDS 327..1613 /gene="LOC106085189" /codon_start=1 /product="uncharacterized protein LOC106085189" /protein_id="XP_013104752.1" /db_xref="GeneID:106085189" /translation="MVAAGLKQQLRGNRCYVSLACSIGSISLAAGSFLQIPNTTDRIS FQRGLFLSSLGFIYFISLTDFCNKYLLETSHGIKFRKKYRLMMSDILDMTNKIVSAIQ ASFSFLVGLIVCKSTCSKTFVYASHCLMEGYGWFGTAYFMYDIWSMYQVHTQKIADKL KLMKITSSASFTPKPIANGQSNGGLYDKHIARTFGANGKRLKALAESTDTNGNDDMQH IRHHEDEIYDYDGETVQIPENGKWGFFKYLITHPVMMIHHIFVGTVGFLVVTYIRGGG HCIYSYMFMMEFSTPFVSLRSILSTLGLKETRTYIINGLVMLFSFFVCRVIMWPYVMW RYSVEINVTFLQAIVGLPIGCIFGILVLFLPQLYWFFLMSKGAMKVFFPKKSSSKHVP INGAAVTNGKSSALQNGSTTTKYTTNGSLKKSEITT" misc_feature <1077..1469 /gene="LOC106085189" /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC; smart00724" /db_xref="CDD:214789" polyA_site 2984 /gene="LOC106085189" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcatatttgg ctgtcaaata catgcagtca caatcgttcg ttcttgaatg ctgtaacaaa 61 gtaaattccc aaatgcattt aagcaacatg tgttgaatca aatacgctca ttcaaaaaca 121 acaacctcaa attctatctt cctattttta tttgttcttc gtaaaagact aacaaaaaat 181 tccagagatt ccttaaatag tccataacgc aacaaacaac gaactaagct tccatttgtc 241 gtcattttgt ctccacaaaa gtctgcccac cttcttccac cttgtcaaca aattgttttg 301 tggtgtgagt tgtagtgtgt gtcacaatgg ttgctgccgg cctaaaacaa caattacgcg 361 gcaatcgttg ttatgtctca ttggcctgtt ccataggctc tattagcctg gctgctggca 421 gcttcttgca aatacccaat accacagatc gcatatcctt tcagcgtggc ctatttctat 481 cttcattggg tttcatctat ttcatttcat tgacggattt ctgcaacaaa tatttgctgg 541 agacaagtca tggcattaaa tttcgcaaga aataccggct catgatgtca gatatcttgg 601 atatgaccaa caaaattgtt tccgcaatac aggcttcctt ctcattcctg gtcggtttga 661 ttgtctgcaa atcgacatgc agcaaaacct tcgtctatgc ctcacattgt cttatggagg 721 gctatgggtg gtttggtaca gcatatttca tgtatgacat ttggtccatg taccaggtgc 781 atacacagaa aattgccgac aaacttaagc taatgaaaat tacctcctcg gcctcgttta 841 cacccaaacc catagcaaat ggccagtcga atggtggcct ctatgataag catattgcgc 901 gtacctttgg agccaatggt aaacgtttga aagcgctggc cgaaagcacc gataccaatg 961 gcaatgatga tatgcagcat atacgtcatc atgaggatga aatctatgat tatgatggtg 1021 agacagtaca aataccagag aatggcaaat ggggtttctt taagtatctc ataacacatc 1081 cggtaatgat gattcatcat atatttgtgg gcacagtggg atttttggta gtcacttaca 1141 ttcgcggtgg tggccattgc atttacagtt acatgtttat gatggaattc tccactccat 1201 ttgtttcatt gcgcagtatt ctaagcacct tgggtctgaa ggagacacgt acctatatca 1261 tcaatggcct ggttatgcta ttctccttct ttgtgtgtcg cgtcatcatg tggccctatg 1321 tcatgtggcg ctatagtgtg gagataaatg ttacattttt acaggccatt gtgggtttgc 1381 ccattggttg tatttttggt attttggtgt tgttcctgcc ccagttatat tggttctttt 1441 tgatgtccaa aggggccatg aaggtcttct ttcctaaaaa atcgtcgtcc aagcatgtac 1501 cgataaatgg cgctgctgtc accaatggca aatcatcagc attacagaat ggatcaacaa 1561 caacaaagta tacgacaaat ggtagcctaa agaaatctga aatcaccacc taaatccagc 1621 tagtagagca tcaacaacgc aacacaaaac aaacgaaaca cacaaagaga aaacatttat 1681 tttgattctt tttttttgga aatacaaaag cagcagcaac aataagaaaa caaaaaatac 1741 ttatcacaaa atataactaa gtctgctaaa caaatgatag aaactaaaaa atatgaaaaa 1801 gaaaacttct aactgttaat taccattaaa gcagatttat agaagataaa gtcagttggc 1861 caacgtagat aaaaccgttt tagtgctggt aatgcaggtt ccaatgtgtg ggttcgttaa 1921 aaccgtgcag gcttcaagcc tagggagcat tctagtgaaa gttaaagaca acactgaaaa 1981 aagattatac cgttaacagc agataaaacc atgcgtttga ggataatgca gtcttaaacc 2041 aacactgaag tgctttattt tattaggact gccgacttta tcatttcttt ctgcatatac 2101 tgcttttttc aaacaattta tttacaattt tcttttttta ttaaatgaaa ataaacaaat 2161 ctttaaaatg ttgcttttat ctttaattag ttttaaatgc atttactttt attctaacca 2221 aaatagttca attctccctc atatacaaaa taaataaaaa aatgggaaaa acaacttatt 2281 ggttttaaaa actcccaaaa aaacacaaag aaatttttga atgaagacac aagagattct 2341 ttaagaatta ataattgtta ttattataat tcagcatatg tatcctaaat atacaaatga 2401 aacaaagaaa gaaaaagcca agccccatta ttgcctgaac aaaataggtt tacctaataa 2461 aatttcaaaa aacaactgat aactgatttt atttaaaaat tgtttttaaa taaactgtat 2521 aattttttat aaatatatac atttaaattt aaattttcta tttgaattta acataacaaa 2581 aagacgtttt taccccctcc catcactcaa tcccatggaa attaaaaaaa aaaacctata 2641 caaataatag tcataaacca ttttttacca tttacctact tcatttcatt ttgtttttat 2701 ttataatttt atccatttgt atattgtatg tactatgtgt aaaaaacata agaaagttga 2761 gaaggttgag aacaagtacg aattgtttat taaagtttat aaaatatgtt aagctattaa 2821 caaatgataa ataatgaaat aaataaaaaa tcaaaacaag taatacataa caaaagacat 2881 aacatatatt cgtataactc tatttgagct tgttgcgtgt gataatggtc atatgcaaat 2941 attaatgtag tgtgtaacaa caacaaaaag ataaaaaaaa acaa