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LOCUS XM_013249203 9043 bp mRNA linear INV 02-SEP-2023 (LOC106085140), transcript variant X1, mRNA. ACCESSION XM_013249203 VERSION XM_013249203.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249203.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9043 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9043 /gene="LOC106085140" /note="uncharacterized LOC106085140; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106085140" CDS 359..3361 /gene="LOC106085140" /codon_start=1 /product="uncharacterized protein LOC106085140 isoform X1" /protein_id="XP_013104657.2" /db_xref="GeneID:106085140" /translation="MARKKKSPKEAAAVKDDSGACGIDNNLLGLPHSLHRCSKDDNLM LHASDSELSEIKQLEKNKSNLFLIKSYSFIDKTNARRPNSLNIPQKLQEFENYHTLLL EESSPVTPLKEDHHKAKEKFKETKKNSKKSSKLGKMKKSKSTYDSLEDLSEFQDILRK PTVILDCEPSGDSSKRPLTFVVDNPHKPVVKSKTMEDIAPLIKRESFIRHSLQSIRRS FSSSKKSQISSSSSNNSSSACSSASSTSSSSSSGGDPQGNSLKKSKNHKNKDKTKIAS EQNNSKEDAIKATPKRNGEYKTHANEPELHNCNQQLMIENTLKASMPQQPIVVISSPS PASSMACLAAHVTLNAPNAMPANSNNNNNSNNNAVILAVLQEEDEKDLQNPLERSTSS VSTLAQLPTDSLGSSSMAPLQTHTEAQSVQCLNSTQSYDHQDSHSPTQATKRSHLQHQ QSIAESLESTSIGCATSSEYSSARSLKHSTTSLAPLQSVPSSTSLRSISPSRRSASSN SSSTAKHEQSPAANTAAGAAVAAATTSAAIASGSSSGQNITPPEKEKKRKEVSSSRVK KFQRHFSQVSQDEKLINYFSCALVSDILLQGHLYITDQHFAFYSNVFGYVTKVVIPTS SVTKISKEKTAKIIPNAVGVATADERHVFGSFISREAAFRLMCSVCPPLDALETLVKD PASIEISEEYSVEDDSSCSISGNESPAQATDNANSTHDNSQTILRRSVANSSLSIADS SAAHKQRHSDIPLNAKTANNNAAFSRASAPPVPGLASAAATAHYANGGSGAVSGHATV AGGGGIGHVIVSSINGPATAIGCPSLEGATNLTFIAGNASTTTSATSTPTPSTSSSPT TVMALPHTKAYQILNKFRTLSNKLLVNLKFPTEIHVVYLGAMLTVLLAVFTIFLLYRI LDIEAKTNVYRSPIEFKWQSANDDDIFAEALRFQKQLQVKSTEEAQNILKTNLEQIAK VRRSLETLSMLIHDRSSSFDSTNPDDSD" polyA_site 9043 /gene="LOC106085140" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tctgaaattc ttttatagca aaaaataata aataacaaca aagaaaaacc aaaaattata 61 agaaatttta acaaaaaaca acaatttaac aaaagtatat aaaaaacaac aacaacaaaa 121 accttaacac caaatcaaaa accaaaacca gcaccaattt tcaagtttaa acaacaaaaa 181 aacaagtgta tagtcaacaa aaaagtgtaa ccaaactcac caaaaagtgt taaaaaattt 241 tctcaaaccc ctccgcttgt actgctgtag aactactcaa gaaatgactc aactctaaca 301 ccttcagaaa accattattg aagacaacaa caactccaca atattttctt cacaaaaaat 361 ggctcgcaaa aagaaatccc ctaaggaggc agcagccgtt aaggacgatt ccggagcctg 421 tggcatagat aataatttac tgggccttcc tcattctctt catcgctgca gcaaggatga 481 caatcttatg ctacatgcca gcgatagtga attgtctgag atcaaacaat tggagaagaa 541 taaatcaaat ttatttctta tcaagtctta ctcctttatt gataagacca atgcgagaag 601 acccaattcc ttgaatatac ctcagaaact gcaggaattt gaaaactatc ataccctgct 661 attggaggaa agctctccag tgacccctct aaaagaagac catcacaagg cgaaagaaaa 721 gtttaaggag acgaagaaaa attccaaaaa atcttccaag ctaggcaaaa tgaaaaaatc 781 caaatccacc tatgactcct tggaggattt aagtgagttc caggatattt taagaaagcc 841 cacagttatc ttggattgtg agcccagtgg tgactctagc aagaggcctt tgacttttgt 901 tgtggataat ccccataaac cagtggttaa atccaagacc atggaggata tagctccctt 961 aatcaaacga gagtctttta tacgccatag cttgcaatcc ataaggcgca gcttttcctc 1021 ttcgaaaaaa tctcaaatat cttcgtcttc atccaataac tcctcgtcgg cctgctcttc 1081 ggcatcttcc acttcgtcca gctcatcttc aggtggcgac ccacaaggca atagcctaaa 1141 gaaatccaaa aaccataaga acaaagacaa aaccaaaata gcctcagaac aaaacaactc 1201 caaagaagat gcaatcaaag caacacctaa gagaaatggg gaatataaaa cacatgccaa 1261 tgagccagag ttacacaact gcaatcaaca gctgatgata gaaaatacgc tgaaagcctc 1321 tatgccacag caacccatag tggtgatatc ctcgccttcg ccagcatcat ctatggcctg 1381 cttggctgcc catgtgactt taaacgcccc caatgctatg cctgcaaact ctaacaacaa 1441 caacaacagt aacaacaatg cggttatttt agctgtactt caagaggagg atgaaaagga 1501 tttacaaaat cccttagaaa gatcaaccag cagcgttagt acacttgctc agttgcccac 1561 agacagtctt ggctcttcgt ccatggcccc tttgcaaaca cacactgagg ctcaaagtgt 1621 tcagtgttta aattcgacac aatcgtacga ccatcaggat tctcatagtc caacacaagc 1681 gaccaaacgt tctcacctac agcatcagca gtcgatagcg gaatccctag aatccacgtc 1741 gataggttgt gcaacgtcta gtgaatattc aagcgcaaga tctctcaaac atagcaccac 1801 atcgttggcc cccctgcaat cggtaccatc ctcgaccagc ctgcgcagca taagtccttc 1861 gcgtcgtagt gcgagtagca acagcagcag cacggccaag catgagcaat caccggcggc 1921 taatacagcc gccggtgctg ctgttgctgc tgccactacc tctgccgcaa tcgcctctgg 1981 ttcaagttcg ggccaaaata tcacaccacc ggaaaaagaa aagaaacgca aagaggtttc 2041 atcgtctcgg gtaaaaaagt tccaaaggca tttctctcag gtgtcgcaag atgagaagtt 2101 aattaactat ttttcctgtg ctttagtcag tgatatatta ctgcaaggac atctgtatat 2161 aacagatcaa cattttgcat tttattccaa tgtttttggt tatgttacta aggttgttat 2221 acccacatcg tcggttacga aaatttccaa agaaaaaacc gcaaaaatca taccaaatgc 2281 tgtgggtgtg gccaccgccg acgaacgcca tgtctttggc agtttcatta gtcgcgaggc 2341 tgcctttcgt ctgatgtgca gtgtctgccc tcccctggat gcccttgaaa cgttggtcaa 2401 agatccggcg agcattgaaa tctccgaaga atactcagtt gaggatgata gcagctgttc 2461 cataagcggc aacgaaagtc ccgctcaggc cacagacaat gccaattcaa cgcatgataa 2521 tagtcagacg atattaagac gttccgtagc taattcaagt ttaagtattg ccgatagctc 2581 agcagcccat aaacagaggc actccgacat tccgttaaat gccaaaacag caaacaataa 2641 tgcagctttc tcaagagctt cagctccacc ggtgccaggg ttagcatctg cagcagcaac 2701 agcccattat gccaatggcg gtagtggggc cgttagtggt catgcaacag tcgccggcgg 2761 cggtggcatt ggccatgtca ttgtgtcctc cataaatggg ccggcaacag ccataggctg 2821 tcccagcctt gagggcgcca ccaatctcac attcattgcg ggcaatgctt ccaccaccac 2881 ctcggccact tcaacaccaa caccgtcgac ctcatcgtcg cccaccaccg ttatggcatt 2941 gccacataca aaagcttatc aaatcttaaa taaatttaga acactaagca acaaactgtt 3001 ggtcaatctg aaatttccca ctgaaatcca tgtggtatac ttgggcgcca tgctcaccgt 3061 attgctggct gtattcacca tattcctatt gtatcggata ttagatatag aagcgaagac 3121 gaatgtttat cgatctccta tagaatttaa atggcaatcc gccaatgatg atgatatctt 3181 tgccgaagca ttacgtttcc aaaaacaatt gcaagtgaaa agcactgaag aagctcagaa 3241 tatacttaaa acgaatttag aacaaatcgc taaggttcgc cgcagtttag aaaccttatc 3301 gatgttaatc catgaccgta gctcatcgtt tgattccaca aatcccgatg atagtgactg 3361 aatttatatt ttgtaattag atttattgtt tttctttttt tttcttctaa ttttttgttt 3421 cttttctatt tttaattttt ttttattaga aaacaagaaa aacttggcga agtttttcct 3481 agttaattat tataagctta gcaatgaagg cgttagaagt atgtatgtac catatgctta 3541 ggatcttgta attagatatt tattactatt attattatca cctttttata ttattgaaat 3601 attccataac ttagtttttg ggtgaatttt ttcataaact tccataagtg tgttaaaact 3661 tctaactaac tccctcatcc cattcttgta aatctaaaaa tcaaatgaat tgattttgct 3721 gaaaagggaa acaaggggat tgcaaaaaag gttttgcttt agttcttgtt ctaaaaattt 3781 atgaattttt tttttaagaa tatttttgga aattttttat ttaaaaattt ccacaaagtt 3841 ttcggaaaaa aaccaaacca tataaaacaa tttgttttgt gttatttatt ataactttga 3901 aaactgtaat actatcataa ctttgaaaac tgtaataatc gaatgttaag gttaaaagtt 3961 taactttata cctctttaaa aaaaaaaagt aaaaattcta agccaaagga aactaattta 4021 aatttggaaa tttattgaaa tattttttgt aaaacaaata ttatgaaaaa ataaaatgaa 4081 taagctttaa tgactctgaa aagagctaat ttctctctaa acaaatgaga tttcttatat 4141 ccaagttgat tgaaatttaa aaaatttaat ttcacttgtt ctattaattt ttgaaacttt 4201 taagggaaat aacttaacat aaaaaatatg atttcaacga atttagttac tacaagtatt 4261 ctatattacc accaaagagt taaaatgttt agggtgaaat gtgttaaagg aaataataga 4321 atgatctcat aaaagaaatt ccactatcaa aaaatttcta ataattatta acccatctaa 4381 agtgtagaaa attaaatgag aacaaagttt tagtttaaat tatttttttt ttgccgataa 4441 tgattcttaa aacctttgtg aaacactatg caaacataac aaaatatgct aaatacttac 4501 aatgtataca gtaatcaatg ctgaaaatgt ttataatttt taatagcaat tatggggtaa 4561 atctgcttta gcataggcaa atgaattgat gtggcgttta atttttggaa accaatatct 4621 agctgacaac agcctttcta taaatgttac acatgtttat gtgtgcagca gtttttttga 4681 acactttttg ttaacgtggg caaatgaatt gatttggaaa aactgtttta gacaaaattt 4741 tttgctacag atcctctttc taaattattc catattaatt atatgtgcaa gcatgttgta 4801 agctatttct ctctaatttc aacatataaa ttgatctatg aacacagcgc taagaatgaa 4861 ttaagtgaat taagtcacct aatacaagca aaagaattga tctaaaaaag ccaacaaata 4921 ggaaatatac cacaaaatac agccactcaa gatatactac actacttcat gaatgcagga 4981 attttcagaa agaaccaact attaagtgag taaatgaatt gatgttgaaa agtttataaa 5041 gacaggatat tgtattgtag atgccccttc cagaattatt aaagtagtct atgtgtgcaa 5101 acgttttctc aatatagctt agcttaacat tagccaatga gttgatgtag gaatacaaag 5161 cttacgagaa ttttcaaaaa gaatcaacta taaaattagt aaatgaattg atgtggaaaa 5221 atttataaaa acagaatatt atgttgcaga tgctccttcc taatttatta aagtagtcca 5281 tgtgtgcaaa catttttcca atacagctta aaataacaat acctaatgaa ttgaagtagt 5341 aataaaaagc ttacgagaac atcttgtaaa acactatctt tctaaaatga ttaatttgtg 5401 ctttaatttt ctgaaacgac tttctataac aagaattaac gaattgatgt agcatatctt 5461 actaaatacc ttctttctag attttttaaa tttcttgatt ttgtgtgcaa ccgatttttt 5521 gtaaaaacgg ttgaatataa tacaggtaaa cgaattgaac ttgaaaaact gaattgagca 5581 aatgatattg ttttagataa tctttcttaa agttttgaga tggtttacgt gtgcaaagat 5641 ttttgaaatg aacttgctgt aatacaagta aattaattaa tctacaaaaa ttaaattgaa 5701 caaaagatat tgttttaaat actttttcaa tatatgttaa gctccatgat atgtgattac 5761 atttttgaat aaagcctccc taacactggc aaatgaattt atctaagtaa acaaagctta 5821 agagaaaatc tgactttcta taaataatta gcaatttcga cctcactttt ttttgcatat 5881 tttggatatc aattatgcga ttatgagctt gttttttgaa gaatcaagac tgcagttgcg 5941 cttaacctca tttttcacca taaactttaa cgctgcatac tcaactcaaa aaattcgttc 6001 acatcaaaaa ttgaaaattt ggataggctt tgctaaaaaa attcaaaaaa ataaaattta 6061 aaatttttag gaatcttgtt tattttagga tttgttttcg aattttgaac cggggaaagc 6121 ttcaacattt tctaaactcg aaaaaattaa gaagttatag cgttttcatt cttaaaactg 6181 accttgaaag ttttaggcct aaaataattc gatttttaca atttttttca tagaaaactt 6241 ggaaattttg cttcaaccag caccaataca gaaagagttt tacttctcgc atgcaattat 6301 gctttcaaaa tttcggagtt cacaaatcta aggaagtaac agcaatttcg acctcacatt 6361 gatatgtttt ttgcattttt tgatatcatt tatacgattt tgagcttgtt ttttgagaaa 6421 tcaacaccgg aattgcgcta atgctccttt ttcgtcatca accacaatgc tgcttattca 6481 tctcaaaaaa atatttcgca tcaaaaattt taaatttttg gaaaggctaa ccccttgcta 6541 aaaaaattaa aaaaaaatta aaatcttaca ttttaagggg ttttgttatt ttacgactca 6601 tcctccaatc ttaaactgcg gaatgcttta aaattttcta aattcgaaaa aaattaatgt 6661 gttacagcgt ttacgaactt aaaaattaca tatgtacata ccttgtattc tcactttgta 6721 aaaaaatcag cttgaaataa acacaaatac tgatgaattg attcttcagc gaaataattt 6781 tcaccattaa ttgtcatttc catatggcac acgaccccct ctctctcaca aaaacaaacc 6841 attacttacc tccagcaatg caatacaata atgaaagtct aaacacttca cttagctcac 6901 tgtaatatat caaaaacttt gcacccacca tgcatgagag ctttaaacct actttcattc 6961 taactcatcc aaatggggca tgcttaatct gctgattttc tgtttaatga aattgtaact 7021 ctttaaagta ttctcgagtt tacatatggc ctctactagg gtttacttat ctctcctact 7081 cttacgctct cttcatcttt ggctttatct cagtgctgtg ttgtcagtct gagacataac 7141 ggatttctct cttggcaatg tgcccacatc atatgatttg ttgttgcgac tacaatgatt 7201 tggttatagg ttcactaaca caaactcagg tcgtgttttc atgcacagcg tctgtgacaa 7261 agtttgttta taaattatta ctttgttaat aattttgaag gaattttgtt ataatttttc 7321 tcataaatat agtgcacatc tccataaata tatctttcga ttattataac ctttgttgca 7381 gttgaatgtc caggaggcca gcaaagtata cagcaaagtt tcgcttagca gtttaacata 7441 tgacatcatt ttcagttatc tattgtgaat ggtatataaa attgttagtt attttttatt 7501 ggaatttcct aattcaattt taatttcaaa ttctttaaaa actttgaaat ttctaaattt 7561 tgggctttgt ttagaatgtg taggcatgtc ctttgaatat tttgttgttc ttaagagttt 7621 tatgtgtttt gtctaaacct taatctttaa aaaggttctt ttagctagtt tttgatataa 7681 aaattaataa aagtgtgcca aacttatttt gaaaacttag aaatttgtgg ataataataa 7741 aaacgtttgc taccaatagg gaaaattatc aaaagcaatt ttatgcatta aaaaaaatcc 7801 caaaaaaaag tattccttta ttcttttaaa ataaattatt taaaaaaaca caaaacataa 7861 atgtcttaaa atttagagca taccaaagaa cgaaagtaaa aacctttagg caaagtttaa 7921 ccaaataaaa tataagaaaa acaaaataga taatttttga caagtatagc tgggacttgg 7981 tgcaatatta gaaagagaaa tatgaaaaaa taaaaaaaaa aaataaataa aaaaacttgc 8041 tgttttgata aaacccatgg aaaaagaggc taaaatttga gacataccac atattagata 8101 aaatataaat atacaaaaaa gaaaaaatta cgagcatttt cgaaattttt actaaaaccc 8161 gtagaaaaac ggaaatataa ctcttctata gaccagaaat cttacacagt ttatatatag 8221 aatttcaaaa cacaaaagcc ataggaaggc agacagcttt tacaaaacat aaacaattat 8281 aaagacgtcc taggcctttt ccacacacgc tcctaagccc ctcatcagca taaacgtttt 8341 aacaagacat tggaaaatat ggaaaaacat aagaaatact atatgtatat acatatataa 8401 acaaaaaaca acatattata tacaattata tatagatata catatttaga acaaaatata 8461 tataaagtcc atatataagc taattctttt atatgaaaag tcactttaat tatgtatatt 8521 ttttgtggta cattcaagtt ttgagctttt ttgcagcagc aatatatgtt tacatatata 8581 ttttttttaa atttctaaac atttttcctt gagaaaaagt tttacacaaa gagagttaaa 8641 aaaaaatttc aaatatttgc ctgcatgttt ttcacacaaa tacacacata ttctttgttt 8701 ttgttttttt tttttaattg aaacgtaaat acaaccctgt gatatatatt tcattttatt 8761 gttttattgt aattattgat ctttaagttt ctaagctaaa attgcgaagt actgcaaggc 8821 taagcaacta ccaacagcaa ttgcaataac aaatgaaata aaacaacaac aaaaaatgat 8881 ttttttgtat aaacctataa ttatagtata atttatacat attaaataat gcatatatat 8941 agtggatgtt tataaaagca aaactcttaa atatagtaag cagcttagtg catattacgt 9001 tattttcctt cgtgaaaacc aataaaaaac aatttatgga aaa