Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013249183 6462 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_013249183 VERSION XM_013249183.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249183.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6462 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6462 /gene="LOC106085133" /note="clathrin heavy chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins" /db_xref="GeneID:106085133" CDS 250..5292 /gene="LOC106085133" /codon_start=1 /product="clathrin heavy chain isoform X1" /protein_id="XP_013104637.2" /db_xref="GeneID:106085133" /translation="MTQILPIRFQEHLQLTNVGININSISFSTLTMESDKFICVREKV NDTAQVVIIDMNDTNNPTRRPISADSAIMNPASKVIALKAQKTLQIFNIEMKSKMKAH TMTEDVVFWKWISLNTLALVTETSVYHWSMEGDSTPHKMFDRHSSLNGCQIINYRCNP NQQWLLLVGISALPNRVAGAMQLYSVERKVSQAIEGHAAAFASFKMEGNKEPSTLFCF AVRTATGGKLHIIEVGSPPTGNQPFVKKSVDVFFPPEAQSDFPVAMQVSSKYDTIYLI TKYGYIHLYDMETGTCIYMNRISADTIFVTAPHESSGGIIGVNRKGQVLSVTVDEEQI IPYINTVLQNPDLALRMAVRNNLSGAEELFVRKFNKLFTAGQYAEAAKVAALAPKGIL RTPQTIQRFQQVQTPAGSTTPPLLQYFGILLDQGKLNKYESLELCRPVLLQGKKQLCE KWLKEEKLECSEELGDLVKTSDLTLALSIYLRANVPNKVIQCFAETGQFQKIVLYAKK VNYTPDYIFLLRSVMRTNPEQGSGFASMLVAEEEHLADINQIVDIFMEHSMVQQCTAF LLDALKHNRPNEGALQTRLLEMNLISAPQVADAILGNAMFTHYDRAHIAQLCEKAGLL QRALEHYTDLYDIKRAVVHTHLLNADWLVGFFGTLSVEDSLECLKAMLTANIRQNLQI CVQIATKYHEQLTTKALIDLFESFKSYEGLFYFLGSIVNYSQDPEVHFKYIQAACKTN QIKEVERICRESNCYNAERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQ KYIEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVKGQFSTDELVEEVEKRNRL KLLLPWLESRVHEGCIEPATHNALAKIYIDSNNNPERFLKENQYYDSRVVGRYCEKRD PHLACVAYERGQCDRELIAVCNENSLFKSEARYLVRRRDAELWAEVLAESNPYKRQLI DQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIILDSSVFSDHRNLQNLLI LTAIKADRTRVMDYINRLDNYDAPDIANIAISNKLYEEAFAIFKKFDVNTSAIQVLIE QVNNLERAYEFAERCNEPAVWSQLAKAQLDKGLVKEAIDSYIKADDPSAYMDVVSVAS QSDSWEDLVRYLQMARKKARESYIESELIYAYARTGRLADLEEFISGPNHADIQKIGD RCFNDGMYDAAKLLYNNVSNFARLAITLVYLKEFQGAVDSARKANSTRTWKEVCFACV DAEEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEELIALLESALGLERAHMGMFTE LAILYSKFKPSKMREHLELFWSRVNIPKVLRAAESAHLWSELVFLYDKYEEYDNAVLA MMAHPTEAWREGHFKDIITKVANIELYYKAIQFYLDYKPLLLNDILLVLAPRMDHTRA VSFFGKTGHLALVKPYLRSVQSLNNKAINEALNGLLIEEEDYQGLRNSIDGFDNFDTI ALAQKLEKHELTEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMEYAAESGKQEIAE ELLAWFLERNAFDCFAACLFQCYDLLRPDVIMELAWKHDISDFAMPYMIQVVREYCAK VDKLEQNEARREKEDETVEHKNIITMEPQLMITAGPAMGMPPQYAQNYAAAGQAPGYA PNMAYPGYGIYK" ORIGIN 1 ctgtaatttg tcaatttgta aagtgtttaa atcagcataa aacatatgcc tacaaattaa 61 gaggcgtttt cgaagatttt tttaatcttt gttgcatttt tgaaaacgtc atctccccaa 121 atctgaaagg caaacgacga gacatagtaa aaacgacaac aataaaacaa taattgtgtg 181 ttcgagtaac ataaaaaaga agcaggagaa gcagcagcag cgaaagattg caggaagaaa 241 gtgcacaaaa tgactcaaat attacctata cgctttcagg agcatttaca gctcacaaat 301 gtcggtatta atatcaattc gatatcgttc agcactctca ccatggagtc ggacaaattc 361 atttgtgtgc gtgaaaaggt caatgatacc gcacaagtgg tcattatcga tatgaatgac 421 accaacaatc cgactagacg tccaatttca gccgattcgg ccatcatgaa tccagctagc 481 aaagtcattg cacttaaagc gcaaaaaact ttgcaaatat tcaacatcga aatgaaatca 541 aaaatgaagg cccataccat gaccgaagac gtggtctttt ggaagtggat atccttgaat 601 acattggcct tggtcaccga gacgtctgtt tatcattggt ccatggaggg tgattcgact 661 ccacataaaa tgttcgatag acattcctcc ctaaatggtt gtcaaatcat caattatcgt 721 tgcaacccta atcagcagtg gcttttgttg gttggcattt cggcgttgcc aaatcgtgtg 781 gctggtgcca tgcaattgta ttcggttgag cgtaaagtat cacaggctat tgaaggtcat 841 gccgccgctt ttgcttcgtt caaaatggag ggcaataagg agccttcaac tttgttctgt 901 tttgccgtgc gcactgctac cggtggcaaa ttgcacatca ttgaagtggg ttctccgcca 961 actggtaatc aaccgtttgt taagaaatcg gtggatgtct tctttccacc cgaggcacag 1021 agtgattttc cggtagcaat gcaggtttcc tctaaatatg ataccatcta tttgatcacc 1081 aaatatggtt atattcatct ttatgacatg gagactggca cctgcattta catgaatcgc 1141 atatcggccg atacaatttt cgttactgca ccacatgagt caagcggtgg cattattggt 1201 gtcaatcgta agggtcaagt tttgtccgta actgtggatg aggagcagat aataccctac 1261 atcaatacgg tattgcagaa tcctgatttg gctttacgca tggcagtgcg caataatctg 1321 tcgggtgctg aagagctttt tgtgcgtaaa ttcaataaac tttttaccgc cggccaatat 1381 gccgaggctg ctaaagtggc cgctttggcc cccaagggta ttttgagaac gccacagacc 1441 atacaacgtt tccaacaggt tcaaacacct gccggttcga ccacaccacc attgttgcag 1501 tactttggta ttttgctgga tcagggaaag ctgaacaaat acgaatcgct ggaattatgc 1561 cgcccagtat tgttgcaagg caagaaacag ctttgcgaga aatggcttaa ggaggagaag 1621 ttggaatgca gcgaggagtt gggtgatttg gtcaagacat ctgatctcac attggccttg 1681 tccatctatc tgagggccaa tgttcccaac aaagttatac agtgctttgc cgagactggt 1741 caattccaga aaatagtatt atatgccaag aaggtgaact atacccccga ttacatattc 1801 cttttgcgtt cggttatgcg caccaatccc gaacaaggtt ctggtttcgc ttcaatgttg 1861 gtggccgagg aggagcactt ggctgacatc aatcaaattg tggacatttt catggaacac 1921 tctatggtgc aacagtgcac tgcattcctc ttggatgctc tcaaacacaa ccgtcccaac 1981 gaaggtgccc tacagaccag actcttggaa atgaatttga tttcagctcc tcaagtggcc 2041 gatgccattt tgggcaacgc catgttcacc cattacgatc gtgcgcacat cgcccaattg 2101 tgtgaaaagg ccggtttgtt gcaacgtgct ttggagcatt acaccgattt gtatgacatc 2161 aagcgtgccg tggtccatac acatcttttg aatgccgatt ggctggtggg cttctttggc 2221 actctatctg tagaggattc cctggagtgt ctaaaggcca tgttgactgc taatataaga 2281 caaaatctac aaatttgtgt tcaaattgct accaaatatc atgaacaatt gaccaccaaa 2341 gctttgattg acttgtttga aagctttaag tcctacgagg gtttgttcta tttccttggt 2401 tctattgtta attattcgca agatcccgag gtgcacttca aatacataca ggctgcctgc 2461 aagaccaacc agatcaagga agtagagaga atctgtcgcg aatcgaattg ctacaatgcg 2521 gagcgtgtaa agaacttctt aaaggaggcc aagttgaccg atcaattgcc cttgattatt 2581 gtctgcgatc gctttgactt tgtccatgat ctggtgttgt atctttatcg caacaattta 2641 cagaaataca ttgagattta tgtgcaaaag gtgaatccct cacgtttacc cgttgtcgtt 2701 ggcggcctct tggatgttga ctgctcggag gatatcatta agaatttgat tttggtcgtt 2761 aagggtcaat tctcaaccga tgaattggta gaagaagttg agaagcgtaa tcgcttgaaa 2821 ttgttgttgc cctggttgga atctcgtgtc catgagggtt gcatcgagcc cgctacccac 2881 aatgctttgg ccaagatcta cattgattcg aacaacaacc ctgagcgttt cttaaaggag 2941 aaccagtact acgatagccg agttgtcggt cgctactgcg agaagcgcga tccccacttg 3001 gcttgtgtgg cctatgaacg tggccaatgt gaccgcgaat tgatagccgt gtgcaatgag 3061 aactctttgt tcaagagcga agctcgttat ttggtacgta gacgagatgc agaattgtgg 3121 gctgaagtat tggccgaatc caatccttac aaacgtcaac ttatcgatca agtagtgcaa 3181 actgctcttt cggaaactca agatcctgaa gacatctccg tcaccgtaaa ggctttcatg 3241 acagccgatt tacccaacga actaattgag ttgttggaga agatcatttt ggactcttca 3301 gtattctctg atcatcgcaa tttgcaaaac ctcttgatct tgactgccat caaggccgat 3361 cgcacccgtg tcatggacta catcaatcgt ttggacaact atgatgctcc cgatatagcc 3421 aacattgcta tctcgaataa attgtacgag gaggcctttg ccattttcaa gaaattcgat 3481 gtgaatactt ctgccattca ggttttgatt gaacaggtca ataatctgga aagggcctac 3541 gaatttgccg aaagatgcaa cgagcccgcc gtgtggtcac aattggccaa ggctcaactg 3601 gacaagggat tggtgaaaga agccattgac tcctacatta aggccgatga cccaagcgcc 3661 tacatggatg ttgtttcagt agcctcccaa tctgattcct gggaagattt ggtgcgctat 3721 ttgcaaatgg cccgcaagaa ggcccgcgag tcatacattg aaagtgaatt gatttatgct 3781 tatgcccgca ctggtcgtct agccgatttg gaagaattca tctcgggtcc caatcatgcc 3841 gacattcaga agatcggtga cagatgtttc aacgatggca tgtacgatgc cgccaaattg 3901 ttgtacaaca atgtcagcaa ctttgcccgc ttggccatca ccctggtgta tctgaaggag 3961 ttccagggag ctgtcgactc tgcccgcaaa gccaactcca cgcgcacttg gaaagaggtc 4021 tgtttcgcct gtgtcgatgc cgaggaattc cgtctggcac aaatgtgcgg tctccacatt 4081 gtggtgcatg ccgatgagct ggaagacttg atcaactact accaggatcg tggttatttc 4141 gaagaattaa tcgctttact cgaatctgct ttgggtttgg aacgcgctca catgggtatg 4201 ttcaccgaat tggctatact gtattccaaa ttcaagccat cgaaaatgcg cgaacatttg 4261 gaattgttct ggtcacgtgt caatatcccc aaggttttga gagcagccga atcggctcac 4321 ctttggtccg agttggtatt cctttatgat aaatacgagg agtacgataa cgctgtattg 4381 gctatgatgg ctcatcccac cgaagcctgg cgtgaaggtc acttcaaaga tattatcaca 4441 aaggttgcca acattgaatt gtactataag gcaattcaat tctatttgga ttacaaacca 4501 ctcctactca atgatatctt gttggtattg gcacctcgca tggatcacac ccgggccgtt 4561 tcattctttg gcaaaaccgg tcacttggcc ttggtgaaac cctatctacg ctctgtacaa 4621 tcgcttaaca ataaggccat taatgaggct ttgaatggtc tactaatcga agaggaagat 4681 tatcaaggct tgcgcaattc catcgatggt tttgataact tcgatacaat tgcattggcc 4741 cagaaattgg agaaacatga attaactgaa tttagacgca ttgctgctta tctctacaaa 4801 ggcaacaacc gctggaaaca atcagttgaa ttatgtaaaa aggatcgttt gtacaaggac 4861 gctatggaat atgccgccga atctggtaaa caagagattg ccgaagaact gctggcttgg 4921 ttcctcgaac gtaatgcatt cgattgtttt gccgcctgtt tattccaatg ttacgatttg 4981 ttgagacccg atgttatcat ggaattagca tggaaacacg atatttccga ctttgccatg 5041 ccttacatga ttcaagttgt gcgtgaatac tgcgccaaag tggataaact cgaacaaaac 5101 gaagcgcgac gagaaaaaga agacgaaaca gttgaacata aaaacatcat taccatggaa 5161 cctcaattga tgattacagc tggtcctgca atgggtatgc caccacagta tgctcaaaat 5221 tatgcggctg ctggacaggc gccaggctat gcgcccaaca tggcttaccc tggctatgga 5281 atatacaaat aatcacatta aattggggct gcacaaacac aaacctattc ccgatgaaaa 5341 gccttagaaa acaaaaaata gaagctgatg aaaatgatta tcttccaaaa caaaaacgga 5401 gttcgaggca attaagatcg ttaataccag tcttagtagt tagccttttt attagcagca 5461 acaaaagcaa catacccgta catgaacacc ttaatcaatt ttcatcgtca tcatcaacat 5521 catcatggcc cttgacagca gcttctggtg tagtttacag tattctctaa atataactaa 5581 aggcgctatt aaacggcatg taaatgtctt atgacatgtc attttttgta tgcacatgta 5641 gtggaaaatg tttgtcaaaa ttgtcaattt acatatgatt cataattttt gctatctcat 5701 ctgtctgtta ttttcgtatg acataaccta aaaatgtgag caaaatctga tttttttatg 5761 cctaaaaatt gttaatcttg tgagaaagct ggtaaaatca taaataatgt gaaaacaatt 5821 tcagttgggt ttgctttcat tcgactgaca acaaaaacag ctgatttctt aaagtttctg 5881 tcagaaggaa tagagcacgc tctaatcgaa aagaattaca tttgctattt gataatttga 5941 catgtcataa gataattaca cgccgtgtaa tcgagccttt actacataca cctatattta 6001 ttattagcag atctttcaaa actaattctc aaaaaaccca acagaaaaaa aaacaaatac 6061 ttacctacag ttaaagttat ataaagaaaa ttttaaattg cgctaaatcg acacataact 6121 taaaagaata tacatagtat ttttccttga aataagtaac ggtaacgcaa acatttaaca 6181 tgacggaaga gtttttatca ccatacatac gaaataacat tttgaattta aaaatatgaa 6241 ttatagagta cataattaaa taaaatatac atatatacct atatgttaaa acatatgttc 6301 aatgttcata ataagcaagc actactatgc acaataagat cgtcgtcgta gcaaaactac 6361 attctcgata catgaatgaa gaacgaaaca ataagaagaa aacatgttta tacgtttctt 6421 taaatttata attaatttga agtaaaaaat aactgtaatt aa