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LOCUS XM_013249167 2008 bp mRNA linear INV 02-SEP-2023 mRNA. ACCESSION XM_013249167 VERSION XM_013249167.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249167.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2008 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2008 /gene="LOC106085119" /note="chitin deacetylase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:106085119" CDS 296..1762 /gene="LOC106085119" /codon_start=1 /product="chitin deacetylase 1" /protein_id="XP_013104621.1" /db_xref="GeneID:106085119" /translation="MLKSNSFKIFSLLFVAAYVVAAQKEEFTCPSTIANGQYADPATC RRFYQCVDGFPYLNRCPSGLYFDDLQKFCTFKDEAKCGPLATTPATVTEAPADLAKKC DTSECQLPYCFCSKDGTQIPAGLEADKIPQMIMLTFDGAVNLNNYDHYLKIFNGKRKN PNGCNIRGTFFMAHEYSNYQQIQHLGYAGHEIATQSISQQQGLQDKGYEEWVGEMIGM REILRNFANVSVNEVVGMRAPFLKPGRNTQYKVLEDFGYIYDSSITVPPVPVPVWPYT LDYKISHECKSGTCPSKTFPGVWEVPLNTHYVEGYEGGHCPFLDQCVLHNLDENEVLE WLQEDFSRYYEQNKAPYMMPVHTNWFQTKPLENGLHKFLDWALELPDVYVVTISQMLQ YMTDPKELRDVSQIDAWKCDKNVAVASKPCNIWNTCALPFKIPEQNITDTRYMETCRE CPNVYPWLGDAGGTGIQGRDSYIFSGPVQEADGEPVEE" misc_feature 380..538 /gene="LOC106085119" /note="Chitin binding Peritrophin-A domain; Region: CBM_14; pfam01607" /db_xref="CDD:426342" misc_feature 686..1486 /gene="LOC106085119" /note="Putative catalytic domain of chitin deacetylase-like proteins with additional chitin-binding peritrophin-A domain (ChBD) and/or a low-density lipoprotein receptor class A domain (LDLa); Region: CE4_CDA_like_1; cd10974" /db_xref="CDD:200596" misc_feature order(704..715,878..895,1004..1006,1010..1012,1082..1084, 1355..1357,1361..1363) /gene="LOC106085119" /note="NodB motif; other site" /db_xref="CDD:200596" misc_feature order(710..715,878..880,890..892,1010..1018,1361..1363) /gene="LOC106085119" /note="putative active site [active]" /db_xref="CDD:200596" ORIGIN 1 gcaatttctt tggacgtcag ctacggcagt tgacggtaca ctttgaaact ctaaagacgt 61 gattagcgct tcgtccaaaa gactgattac gggtgtaagc ttaacttaac ttaactctcg 121 ctcgctggca ctcatacaaa cgcattcgtg caaaattaag gaaattcaac agaagtttta 181 cttttggttg aattcttcct aaaaaataca aacatacaga gaaaataaca aaaaattaat 241 taaattttct cttaatcttg tgtgtaacaa aaaaaaaagt gattaattag tcattatgtt 301 aaaatcaaat agttttaaaa tattttccct gctctttgtg gcggcgtatg tagtagcagc 361 acaaaaagaa gagttcacct gtccctcgac catagccaat ggccaatatg ctgatccggc 421 cacatgtcgt cgtttctatc agtgtgttga tggtttccct tatttaaatc gctgtccttc 481 tggtctttat tttgatgatt tacagaaatt ctgtaccttc aaagatgagg ccaagtgtgg 541 tcctttagca acaacaccag caaccgtaac cgaagcacct gctgatttag cgaaaaaatg 601 cgatacaagc gaatgtcaac tgccatactg tttctgctcc aaggatggca cacaaattcc 661 cgctggctta gaggcggata agatccccca aatgattatg ctgactttcg atggtgctgt 721 caatttgaac aactatgacc actatttgaa aatattcaac ggtaaacgca aaaatccaaa 781 tggttgcaat atacgcggca ccttcttcat ggctcatgaa tacagcaact accaacagat 841 tcaacatctt ggatatgcag gacatgaaat tgccacccaa agtatttccc aacaacaggg 901 cttgcaagac aagggctacg aggaatgggt tggtgagatg attggtatgc gcgaaatttt 961 gcgcaatttc gctaatgttt ccgtcaatga ggttgttggt atgcgtgctc ccttcttgaa 1021 gcctggtcgc aatacacaat acaaggtctt ggaagatttt ggctacatct atgacagctc 1081 tattaccgtt cccccagtac ctgtgcccgt ctggccctac accttggact acaaaatctc 1141 tcacgaatgc aagagtggca cctgtccttc caagacattc cccggagttt gggaagttcc 1201 tttgaacact cattatgttg agggctatga gggcggccac tgtcccttct tggatcaatg 1261 tgtgttgcac aatttggatg aaaatgaagt cttggaatgg ttgcaagaag atttctcacg 1321 ctattatgag caaaataagg ctccctatat gatgccagtg cacaccaatt ggttccagac 1381 taaacctttg gaaaatggcc tgcataaatt cttggactgg gccttggaac ttcccgacgt 1441 ctatgtggtc accatttccc aaatgttgca atacatgacc gatcccaaag agttgcgcga 1501 tgtcagtcaa atcgatgcct ggaaatgtga caaaaatgtt gctgttgcct ccaagccctg 1561 caacatctgg aacacctgtg ccttgccctt caaaattccc gaacagaata tcaccgatac 1621 ccgttacatg gaaacttgtc gcgaatgccc caatgtctat ccatggttgg gtgatgctgg 1681 cggtactggc attcaaggtc gtgacagtta tatcttctca ggacccgttc aggaggccga 1741 tggtgaaccc gtagaagagt agacgaacaa caacatcata aaggcagttt agagaaagag 1801 tgccagaaac ccagaaacta aaggaacaaa tttctttttt ttgtcaaaaa attttttttt 1861 atctcaaatg tttgcttttc ttttttgtta tattttttta ttttaattta attattatga 1921 gagttttttt gtttgttttt tttctccttc gagaaactta attttgtgtt taaaacttga 1981 cttttgataa attgaaaaat agttgtta