Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013249164 1860 bp mRNA linear INV 02-SEP-2023 (LOC106085117), transcript variant X1, mRNA. ACCESSION XM_013249164 VERSION XM_013249164.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249164.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1860 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1860 /gene="LOC106085117" /note="dnaJ homolog subfamily C member 22; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106085117" CDS 465..1661 /gene="LOC106085117" /codon_start=1 /product="dnaJ homolog subfamily C member 22" /protein_id="XP_013104618.1" /db_xref="GeneID:106085117" /translation="MPKDNMNGSAVSSSQANGKIHQNGSAKHNQKFDVNSLPPQKSVV IAYILWLFGGILGLHHIYLRRDRHAFVWWCTLGGYFGIGWLCEIFAIPGYVRDANEDP RFIEEFVKKLQHFKKPPYSGKRFVGEVMIGYLFGQLFEMAIPQTEFLGIDFTILHWLI PVFVALGVWTVGNIGREKGVLWHCLLAALAAYPVRYFIYDETYTLLISALASALVFDH YSKEWLRTPPKRRGAMERSLKFTGALCIYFSIWGCFLFFNGTISDEDGNEVPIHEAFQ NFLASAWWTDIAQALKDTYNYAQHHGWYETWKEIFESMDVDGERNAYKVLGVSATASQ SEITSAYRRLSKEFHPDKVKDESQRAAANQRFIEIQQAYSVLSKIKSSRRRKNTKSVE DDPIVL" misc_feature 579..731 /gene="LOC106085117" /note="TM2 domain; Region: TM2; pfam05154" /db_xref="CDD:428337" misc_feature 1422..1607 /gene="LOC106085117" /note="DnaJ molecular chaperone homology domain; Region: DnaJ; smart00271" /db_xref="CDD:197617" misc_feature order(1509..1517,1551..1553,1560..1565,1572..1577) /gene="LOC106085117" /note="HSP70 interaction site [polypeptide binding]; other site" /db_xref="CDD:99751" polyA_site 1860 /gene="LOC106085117" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atactttagg ctttgaacga tatacatgtt gggagttaaa gcaatagcag caacaagaaa 61 gaacctgtca gaccgtgaat tctcagcttt taagtatact tttcaagtag aaaacaaact 121 acattgacaa cggaaataac gaaaaagcta ttaaaaagaa gttttaatta ttgttaactt 181 gatacagagt ctgagtgcaa aaatatatat tatttaatta aaaaaaatca cgggttaact 241 tatgaattga cgtgtctttt cggaaggcgt agttagttat ttggagcatt gttttggagc 301 tggctgtgac caaaaacaaa aaccccaaac gcaagtagac gtgaaaagag aaagtctggt 361 gcgcactgtt aacaaagagt tttgaatgcg taaagcagtt taaggaggtc taactgaatt 421 tacaattgca agatattctg attgatattg tttgagattg caatatgccc aaggacaata 481 tgaatggctc ggcagtaagc tcatctcaag caaatggtaa aattcatcaa aatggctccg 541 cgaaacacaa ccagaaattt gatgtcaatt ctttgcctcc acaaaaatcg gttgtcattg 601 cctatatact ttggctattt gggggcattt tgggcttgca ccacatatat ttgcgtcgcg 661 atcgtcacgc cttcgtctgg tggtgtacct tgggcggtta ctttggcata ggctggttgt 721 gtgaaatttt cgccataccc ggctatgtgc gagatgccaa tgaggatcct cgttttatcg 781 aggaatttgt aaagaagctg caacatttta aaaaaccacc ctattcgggt aaacgttttg 841 tgggcgaggt aatgattggt tatctctttg gacaattgtt tgaaatggcc ataccacaga 901 cggaattctt gggtattgat tttaccatac tgcactggct aataccagtt tttgtggcat 961 taggcgtttg gactgtggga aatattgggc gggaaaaggg tgtgctatgg cattgtcttt 1021 tagctgctct ggctgcatat cctgtgcgtt atttcatcta tgacgaaact tatactttgc 1081 ttatatctgc tctggcttct gcactggttt ttgatcatta ttccaaagag tggttacgca 1141 caccgcccaa aaggcgaggc gccatggaac gatctcttaa gttcaccggc gctctttgca 1201 tttacttttc catctggggt tgtttcctat tcttcaatgg caccatatcc gacgaggatg 1261 gcaatgaagt gcccatacac gaggcattcc aaaacttcct agcctctgct tggtggacgg 1321 atattgccca ggctctaaag gatacctata attatgcgca gcatcatgga tggtatgaaa 1381 catggaagga aatctttgaa tccatggatg ttgatggcga gcgtaatgct tacaaagttt 1441 tgggcgttag tgcaacagct tcacagtcgg agataacaag tgcatatcgc agactttcca 1501 aagaattcca tccggataag gttaaggacg aatctcaacg tgcagcggcc aatcaacgtt 1561 tcattgaaat acaacaagcc tatagcgtcc tatcgaaaat caaatcaagt cgacgtcgta 1621 aaaataccaa atcagtggaa gacgatccca tcgttttgtg aaacactaga aaatgacttt 1681 atttaatgtt aagttttgat tattttctta tttaaaaacc ctaaactgta atacatacca 1741 gtgacttaat atgtgtagta tgtagttcta attttagcat ttttacaatt agctcccaaa 1801 atacatacaa cgaaataata tttatttaaa atatataaat cttcaagttt acattaaaaa