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LOCUS XM_013249162 3119 bp mRNA linear INV 02-SEP-2023 (LOC106085115), mRNA. ACCESSION XM_013249162 VERSION XM_013249162.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249162.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3119 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3119 /gene="LOC106085115" /note="integrator complex subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085115" CDS 99..2951 /gene="LOC106085115" /codon_start=1 /product="integrator complex subunit 4" /protein_id="XP_013104616.1" /db_xref="GeneID:106085115" /translation="MASISIAVKRPISVTETLEASSSQPPHKKIRIQTTTKNAANGKL QQALNILETISPQNSKELLDLLVKIADELVLNDCQLPEIHDAISKLIELFRQERDGDT TIRVMILGLLADLSDIRIAEVVNALIDEIIGVLKYEKSQKVIAQGLGSLHKIGTKNLK ILATMHVTKIAHFAQQQLCSESHQTQKNALMVLSSFVALTDAKKGVIDTIGHYADSQD SGVRAQSLRSILCLGERGALLSPALYQRAVDAMQDDYECVRQQALQLVLQIGLKHPEH MILCGTEDEEEMRLIDAAFSKVCAALCDLSIQIRVQAAEHLGQMTMVGPEFLHQTLDK KLMSNLRRKKTAHERGAQLVASGEWSSGKRWADDAPQEHLDAKTISLIASGACGALVH GLEDEFMEVRIATVDSMCKLALKHPDFAVTCLDFLVDMFNDEIEEVRLKAIYSLTAIA RHIVLREDQLEIMLSSLEDFSVEVREGLHLMLGACRVSTQACLLMVVQKLLDVLAKYP QDKLSAFGCMRKVGQKHPHLCMAVTSHLLQDHPFFDSAERDVEDPSYLCILILLFNAA ASLVPIISLFPDVTLKHYAYLRDAMPALVPPLPIEGASTKKPMDDVNSSNNSREYLET MLAHINDIFTIATERVPLLKTAQDNLKRLGEIDPEMVGTANFLETFLAAQIQIEQLQS CTTSHHSRAPLKESLSQLVRNCLKLQHIFSGLSYSDMLLVKQICLRASALHLVLVVRD RSQSALGPCQMLLQTASDISNFLDDKESFQPDTLTTSLLNQLSSIVDPKPGKVFREIL PLVQRPCVVRMPPPNVNIKMCEANILEPCPQMSQDNVIKVTAGLIAALPFVAEIDNLQ ETQKNDMRIKIKYPDQHMHTVVPKLSDFKKIMTEQGAHETNVKLRTTILLSHSVWTEA SSVEITLCLAVRPGTDLELCKPAKILFAPKPVRRGI" misc_feature 1254..1340 /gene="LOC106085115" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1263..>1523 /gene="LOC106085115" /note="HEAT repeat [General function prediction only]; Region: HEAT; COG1413" /db_xref="CDD:441023" misc_feature 1362..1454 /gene="LOC106085115" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" misc_feature 1470..1550 /gene="LOC106085115" /note="HEAT repeat [structural motif]; Region: HEAT repeat" /db_xref="CDD:293787" polyA_site 3119 /gene="LOC106085115" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctttgttgtc tagacggcgt atttattatt tatctaattt catccaaaaa ctttgcaggc 61 taatagtcaa gtacaagttt acagccttat tccttaaaat ggccagtatt tcgattgctg 121 taaagaggcc gatttcggta acagagactc ttgaagctag cagctctcaa ccaccccaca 181 agaagattag aatacaaaca accactaaaa acgcagcaaa tggcaaactt caacaagcat 241 tgaacattct tgagactatt tcaccacaga atagcaagga gcttctggat ctattagtaa 301 agatagcaga tgaactggta ctaaacgatt gtcagttgcc agaaatacat gatgctataa 361 gtaaacttat cgagttattt cgccaggagc gtgatggaga caccacgatc agagtcatga 421 tattgggttt gctggcagat ctttctgata ttcgtattgc cgaggtggta aatgccttaa 481 ttgatgaaat cataggcgta ttgaagtatg aaaagtcaca aaaggtaatt gcccaaggct 541 taggtagttt gcacaaaatt ggtacgaaaa acttgaaaat tttagccaca atgcatgtta 601 ccaaaatagc ccattttgca cagcaacaat tgtgctcgga gtcgcatcaa acacagaaaa 661 atgccttaat ggtgttgtct tcttttgttg ctttgacgga tgccaagaag ggtgttatcg 721 ataccattgg ccactatgcc gactcccagg attctggggt gagggcacaa agtttgagat 781 ccatactatg tttaggcgaa agaggagcac tactatcacc cgccttatat caaagagctg 841 tagatgcaat gcaagacgac tatgaatgtg tacgtcaaca ggctctacaa ttggtcttgc 901 agataggcct taagcatccc gaacacatga tattatgtgg cacagaggac gaagaagaaa 961 tgcgcctaat agatgcggcc tttagtaaag tatgcgctgc cctttgtgac ttatcgattc 1021 agataagagt tcaagcggca gaacatttag gacaaatgac tatggtgggt cccgagtttc 1081 tgcatcaaac tttggataaa aagcttatga gtaatttgcg acgtaagaaa accgcccatg 1141 aaagaggagc tcaactggtg gcatctggtg aatggtcctc tggtaaacgt tgggccgatg 1201 atgctccaca agagcatttg gatgccaaga caatatcctt aatagctagc ggagcttgcg 1261 gcgccttggt acatggcttg gaggatgaat tcatggaagt gcgcatagcc acggtagatt 1321 caatgtgtaa attggctctc aagcacccgg actttgcagt tacttgtttg gattttcttg 1381 tcgacatgtt caatgatgaa atcgaagaag ttcggctcaa agcaatttat agtctgactg 1441 caatagcccg tcatattgtt ttgagagaag atcaattgga aattatgttg tcgtctctgg 1501 aagatttttc ggttgaggta cgagagggcc ttcacttgat gctgggggcc tgccgtgtat 1561 ccactcaggc ttgtctgctg atggtagtgc aaaaactgct ggatgtgttg gcaaaatacc 1621 cgcaggataa attgtcagca ttcggttgca tgcgtaaagt aggccaaaaa catccccatc 1681 tttgcatggc agttacatcg catcttctac aggatcatcc atttttcgat agtgctgagc 1741 gtgatgttga agatccatca tatctttgta tattgatact gttatttaac gctgctgcta 1801 gcttagtccc gattattagt ctatttcccg atgttacgct taagcattat gcttaccttc 1861 gggatgcaat gcctgcactt gttccgccac tacccataga gggcgcttcc acgaaaaagc 1921 ccatggatga tgtaaatagt tccaacaatt ctcgagaata tttggaaaca atgctggctc 1981 atattaatga catatttacc attgccaccg aacgagtgcc tctgcttaag accgctcagg 2041 ataatctaaa gcgtttgggc gaaatcgatc cggaaatggt gggaactgca aattttttgg 2101 aaacattttt ggctgcacag attcaaatcg agcagctgca atcgtgtact acatcacatc 2161 atagccgagc acctctaaag gagagcctat cacagttagt gcgcaactgt ttgaaattac 2221 agcacatatt ttctggtctt agctatagtg atatgctgtt ggtgaaacag atatgcttaa 2281 gagccagcgc attgcacttg gtgttggtag ttcgtgatcg atcccaaagt gctttgggcc 2341 cttgtcaaat gttgctgcag acggcgtcgg atataagcaa ttttcttgat gacaaagaat 2401 ctttccaacc agacacttta accacgtcgc tacttaatca gctttcaagt attgtggacc 2461 ctaaacctgg caaagtgttt agagaaatat taccgcttgt gcaaaggcca tgtgttgtgc 2521 gtatgccacc acctaatgta aacattaaaa tgtgtgaggc caatattttg gagccttgtc 2581 ctcagatgtc tcaggataat gttattaaag tgacagcagg ccttatagcc gccctaccgt 2641 ttgtagcaga aatcgataat ctccaagaga cccaaaagaa tgatatgcgc ataaaaatta 2701 aataccccga tcaacatatg cacacagttg taccaaaatt atccgatttc aaaaaaatta 2761 tgaccgagca gggagcccat gagacaaatg ttaagttaag aacaacaata ttactatccc 2821 attctgtttg gacagaagcc tcgtcggtgg aaattaccct atgtttggct gtacggccgg 2881 gtactgattt agagttatgt aaaccagcta agatactatt tgcgccgaaa ccagtcagac 2941 gtggtattta aggagacata tactttttag tgttaagaat aaaaattgca gttttttgta 3001 atttggttca atgtgaaaga tgtttataag attattgtaa ctctcatgga gaaatgcgaa 3061 aggaaggaaa ccaattgcga tgtgaatcaa aatacaacaa aattttgtat gaaaatcga