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LOCUS XM_013249153 8980 bp mRNA linear INV 02-SEP-2023 (LOC106085108), transcript variant X2, mRNA. ACCESSION XM_013249153 VERSION XM_013249153.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249153.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8980 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8980 /gene="LOC106085108" /note="nuclear pore complex protein Nup153; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106085108" CDS 721..6591 /gene="LOC106085108" /codon_start=1 /product="nuclear pore complex protein Nup153 isoform X2" /protein_id="XP_013104607.2" /db_xref="GeneID:106085108" /translation="MKMSEYGLDEDSSPSQQQIGGEAHNLSTDDPTNAANNSIIGKVK SRVSSILPNSLSKWFSPSSKVRSEELNGSLNCNATTTRRKRRIDIDDDEDEEEENENY VERQARRGIHEENHNIRCKMEENSEAEEDEEDDDDDDSQNSEEEYNATVAAQKTRHDL FGRQPPAKRSRLQIDMRDSPLIAPRRPLIASTPAVASTYTRNSIGTTSASRSSYQRYT HLNLYGNQSKKEQAYNFNIQKDTAAPKINTDIIDLISQPPNEIEERLAANSDICSRTA RSSRKSLNIPTSANRSVADRLLAPATHLKRPSLSSATLDTMLPSNPVGTPPRRTSTTI HEVKESVEHSALGEADDENNELSHNGQLLNEEPNEPSCSKRAKRQNHINGSGFNNPRS IPEENDAILLDTASESSESGTTELNKSKHERKTGLFNTSIAGTGTTRNSSRTSSFGNG LNFYSHLEGKKSLFNSASGHGMSNQLNNSTLSLNSLNRRQFNASIYGSTSALSDSRLL NTFSPFYKGKTTYGGAAAYNKYTAGAGASAVRITPTLIRPASSLSTLSSSNNSLSTAG IGNPQQIGEISNISSTAKRILDLINDFATPLSEAKKMASTIKTNAYLPPQAKSRLNDS DLNASRAMRLSQVRTPYARPAVILQPSGNANIGSRGSTMLSGPTPPVRELQVPTMSQL LQMKKIQNMTERARKITRDSSATNAEVVEYTLPVTTKTAESAKVAAVEDSGGRSSGAS EKQPQPQLQQKHTNKIKNKITTTMRASVASKDIHDEAPPPTLNLPNIAFPLMQSVPKF DIQFSTSPTLTSATSHANSVSTEGGKTTPKPLSSNISQIAFNTKPISTTSVDSVGKKE TTTTKSYNFGSGVSTSSAPTTTLNFKFSEPLVVKGLNTPTQNITPSNLDNYKFSPPLE VTQSMTPTKTTPLLKPQQPQLKSGSCLDVLNKPLALPGNSNKTTTESSTSASLSSNSF GDKFKKASNEWECGTCMIRNKADLPKCVACETPRKSDPTPVSESNISTFGDKFKKSSS EWECDTCMIRNKQESIKCVACETPRKGLSSSTTNNIAVLPPIKNTFGDAFKPKSGSWE CSTCLISNKSDSNECVACQTKKPGSSISSSGNTTTTATTAAPSVSTFKFGFSAAQTTN VPTTTDAGFKNIAAQQKASKWECDACMTRNDAERTKCACCEQPKPGSVATESSSSTTK FTFGATAAAKFSFGFGPGSNAPKEDELRKDKAVDSVAKNAMSITSKAANNNTTLPTSG FQFGFKPTPTLNTENKTDEMDTKNTKSSVATSSSTVLKGFQFGSVTETTKKPEVPSTT ATTFVSSGFNFGTKTSNAPTTTTTTATTSTSTSVKMSKPAVSSPSVKFNLPTTGTTFS FASNSSSATTGVVSFGTKPAVPAPTDEKKSEGFAFKTPAAVSSSTTSNTGASSGGFTF GSPAASSSTAITPAITSSTSTTPTTTALVKPMFSFGTSNTTPATSSVVATTTTSSGGF GSFSFGGNNTPSTAVKPLFGAVTSTTSTTTSASSNTSTKPAATTNVFGSFAGTTSATP TFGSSSAIANPANNSTAVSSSTNSSNMSVNNATPTFGTFGVGSNSANNTTNVFGSFGS SSTQSNSTQNKPAAATAAAAAPPPVFGSVASSNTNTAHGASPSTNAFVFGSATNTAVT ASGTSSFSSAAANTSFGSKNTFVFGSPAPLQSTTATTAQKDAPKPSLFGAFGSGGTAI TSNQATTSIFGSPASFAPATAATSPPPVFGSNNSSSIVTTTNPSTNLFGMNSAPAPAP VTNIFGANPSGNAATPAPAFGSSPFGGGGSASSTSATPTFGSTAVTGSATFGGFGATV GNTTNPRAEVKKIEPAFNFGSAQTTQQSVSGGFNFGSTSAPTKPAFNFGSTGAAQPTF NFTGSSETTPNAPFQFNAGAAPVSDNIFAPAPTPGAQTAQQAKRKIRAPIRRVTQR" polyA_site 8980 /gene="LOC106085108" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtcgctcctt cttcgtctga aaccgaatag accacgcgaa tcgacttttt tctcatggct 61 tcttaaaatt ttaaataaaa tagcaacaat caatgtttta taaactaatt gtgcaaatta 121 ttcaactcca gctaaagtta ttttaattta aaagcaagga ccaacgaatt ttggatcata 181 aaccttggaa gtcattgtgt ttcttcaact gtcagcaagt caccaaacgc aaatctaagc 241 aaaaaaagaa agaaagaacg agcgagcgaa aaccacttaa acggcaagag gggctaaaac 301 caaagccaaa tttgtataaa atctagaaat ctttgaaaca tcaatcttca cagttttctt 361 taaaaagtga ttagtgtatt aagtttataa ttaatgtgtt taccaaatat aagcagagat 421 attgcggatg acatatctac cagcgtcata ttcgtcagga tttcataagg aaaaatttaa 481 tcaaaatatg aaattcaata aatcacatcg taatatttaa aaaatacgag ttaagaagac 541 gccaaaactc caagctctag ggggtgcgtg tgtgcatgca tgcgtcaaca gtgtaacctc 601 gctgcgctgt atgggaatta caattaaagg tgctgcctgt gtttagattt cagcacaagc 661 agatatttcg caatatatac atttaattta tcaattattt caattgttga taaagtatag 721 atgaaaatgt cggaatatgg tctggacgaa gacagtagtc catcccaaca acagattggc 781 ggtgaagcac acaacctcag cacagacgat ccaacgaatg cagctaacaa ttcaataatt 841 ggaaaagtaa agtccagagt atctagcatt ttgccaaata gtttgtcaaa gtggttttca 901 ccttcttcga aagtgcgtag tgaagaatta aatggtagct taaactgtaa tgcaaccacc 961 accaggagaa aacgtcgcat agatatcgat gacgatgaag atgaggagga ggaaaatgag 1021 aattacgttg aaaggcaagc aagacgggga atacatgagg agaatcataa tataaggtgt 1081 aaaatggaag aaaattccga agctgaagag gatgaagagg acgacgatga tgatgatagt 1141 caaaacagtg aggaagaata taatgcaact gtagcagcac aaaaaacaag gcatgacttg 1201 tttgggcgac agccacctgc taaaagatcc cgtcttcaaa tcgatatgcg agacagcccc 1261 ttgattgcac ctcgaagacc attgatagca tccactccag ctgtagccag tacgtataca 1321 cgtaattcga ttggcactac ctcagcttca cgttcaagtt atcaacggta cacacattta 1381 aacctatatg gaaatcaaag caaaaaggag caggcgtata attttaatat acaaaaggat 1441 acagcagccc cgaaaattaa tacagatata attgacttaa tatcacaacc acctaatgaa 1501 atcgaagaaa gacttgcggc taattcggat atatgtagcc gaactgcaag aagctctcgt 1561 aaaagtttaa atataccaac ttctgcaaat cgatcggtag cagatcgttt gcttgcgcca 1621 gctacccatt tgaagaggcc atcattgtca tcggctacct tggatacaat gctgcctagc 1681 aatccagttg gcactcctcc cagacgtaca tcaactacca tacacgaagt caaggaatct 1741 gtagaacaca gcgcactggg cgaagcggat gacgagaaca atgaacttag ccataatggt 1801 caattattga atgaagaacc aaacgagcca tcctgttcga agagagccaa aagacaaaat 1861 cacataaatg gttctggttt taataatcca cgaagcatac ccgaagaaaa cgacgctatt 1921 ttattggaca ctgcctcaga aagcagcgaa agtggtacga cagagttaaa taaatcaaaa 1981 catgagcgta agactggtct ctttaatact tcaattgccg gtactggaac tactcgtaat 2041 agcagtagaa catcatcatt tggtaatggt ttgaatttct attctcattt agaaggaaag 2101 aaatcattat ttaactctgc ctctggtcat ggcatgtcaa atcagttaaa caattctacg 2161 ttgtctctta actccctaaa tcgccgacaa tttaatgctt cgatttatgg cagcacatcg 2221 gcattgagtg atagtcgttt gttgaataca ttttcgcctt tttataaagg caaaactaca 2281 tatggtgggg cagcagcgta taacaaatat acggctggtg caggcgccag tgctgtacgt 2341 ataaccccca cactgattag acccgcatcg agtctttcca ctctctcatc atcgaataat 2401 tcattatcca ccgctggtat aggaaaccct caacaaattg gcgagatttc aaatatatca 2461 tctactgcta aacgcatatt ggatttaatc aatgattttg ccacaccctt aagtgaggcc 2521 aagaaaatgg caagtaccat caagacaaat gcttatctgc cacctcaagc aaaatcccga 2581 ttaaatgact ctgatttgaa tgcttcacgt gccatgcgtt tgtcccaagt gcgtacaccc 2641 tatgcccgcc cggcggtgat tttacaaccc tcaggcaatg caaatattgg aagtcgtggc 2701 agtactatgt taagtgggcc aacgccacct gtgagggagc tacaggttcc cacaatgtca 2761 cagttattgc aaatgaagaa gatacaaaat atgactgaaa gagccagaaa aataacacga 2821 gattcgtctg cgacaaatgc cgaagtagtt gaatacacat tgcctgtaac tacgaaaact 2881 gcagaaagtg cgaaagttgc tgcagtagaa gacagtggtg gtagatctag tggtgcgtct 2941 gaaaaacaac cacaaccaca acttcaacaa aagcacacaa ataaaataaa aaataaaata 3001 acgactacaa tgcgagcttc ggtggcatca aaagacatac acgatgaagc accaccgccc 3061 acgttaaatt tgccaaatat agctttccca cttatgcaat ctgtacccaa attcgatata 3121 caattttcga cgtcgcccac tttaacgtca gctacgtcac atgcgaatag cgtttccaca 3181 gaaggcggca aaacaactcc aaaacctttg tcatcaaata taagccaaat tgcatttaat 3241 acgaaaccaa tttcaacaac atcggtggat tcggtaggga aaaaggaaac tacaacaaca 3301 aaatcctata actttggtag tggtgtttca acgtcgtctg cacccacaac cacgttaaat 3361 ttcaaatttt ccgaaccttt ggtagtgaaa ggactgaaca ctcctacgca aaacataact 3421 ccttctaatt tagataatta taaatttagt cctccattgg aagttacaca gtcaatgaca 3481 cctactaaaa caacaccact actgaaacca caacaacctc aacttaaatc tggctcttgt 3541 ctggacgtct taaacaaacc actggcattg cccggcaatt caaataaaac aactactgag 3601 tcctcaacat cagcatcgtt atcttcgaat tcatttggtg ataaatttaa gaaagcctcc 3661 aatgaatggg aatgtggcac atgtatgata cgcaataagg cggacctgcc taaatgtgta 3721 gcatgtgaaa ctccacgcaa atctgaccca accccagtca gtgagagcaa tatatcgact 3781 ttcggagata agtttaaaaa atcgtcctcc gagtgggagt gcgatacgtg tatgatacga 3841 aacaagcagg aaagtattaa atgtgtggct tgtgaaactc cccgcaaagg attgagttct 3901 tcaacgacta acaatatagc cgtgttgccg ccaataaaaa atacatttgg tgatgccttc 3961 aaaccgaaat caggctcatg ggaatgctcc acttgtttaa ttagcaataa gagcgactca 4021 aatgagtgcg ttgcgtgtca aacaaaaaaa ccaggttcgt caatttccag cagtggtaat 4081 actacaacaa cggcgactac agctgctcca tctgtatcta catttaaatt tggattctct 4141 gcggcgcaaa caactaatgt accaacaact accgacgctg gctttaagaa tatcgcggct 4201 caacaaaaag cttcaaaatg ggagtgtgat gcttgtatga cacgcaatga tgcggagcga 4261 acgaagtgtg cttgttgtga acagccgaaa cccggctcgg tggcaacaga aagctcatct 4321 tctacaacaa aatttacgtt tggagcaacg gctgctgcca agtttagttt tggctttggc 4381 ccgggctcaa atgcaccaaa ggaagatgaa ctacgaaaag ataaagctgt tgattcagtg 4441 gccaaaaatg ccatgtctat aacatccaaa gctgcgaaca acaacaccac tttacctacg 4501 tctggttttc aatttggatt taaaccgact cctactctga acacggaaaa taaaacggac 4561 gaaatggata ctaagaacac caaaagctct gtggcaacct caagttctac agtgttgaag 4621 ggctttcaat ttggcagtgt gactgagaca acaaagaaac ctgaggtccc gtcaacaact 4681 gctaccacat ttgtatcgtc aggttttaat tttggtacca agacgagcaa tgcgccaaca 4741 actacaacca caaccgcaac aacgtcaaca tcaacatctg tgaaaatgtc taagcctgct 4801 gtaagctcgc caagtgttaa gtttaatttg cctacaactg ggaccacatt cagttttgct 4861 tctaattcat catccgcaac tactggagtt gttagttttg gaactaagcc cgctgttccc 4921 gctccaacag acgaaaagaa gtcagaaggt ttcgcattta agacgccagc agctgtatca 4981 tcgtctacca caagtaacac cggcgcttca tcgggcggat ttacgtttgg ttcgccagct 5041 gcatcatcat ccactgctat cacaccagct ataactagta gtacatccac aacgcctacc 5101 acaacagcgt tggtaaaacc aatgtttagt tttggaacat caaatacaac tccagcgaca 5161 tcatcagttg ttgccacaac cactacgtcg tctggcggtt ttggaagttt cagcttcggt 5221 ggcaataaca caccctctac ggctgttaag cccttatttg gggctgtaac gtctacaaca 5281 tcgacaacaa cttcagcttc ttcaaataca agtacaaagc ctgccgccac aacaaatgta 5341 tttgggtcgt ttgcaggaac aacctctgca acaccaacat ttggttcctc ctctgctatt 5401 gctaatcctg ccaataattc aacagctgtt agttcctcca ccaacagttc caatatgagc 5461 gtaaataatg ctactcctac atttggaaca ttcggagtgg gtagtaattc agccaacaat 5521 acaacgaatg tatttggttc ctttggtagc agcagtaccc aatcaaattc aacccaaaat 5581 aaacccgcgg cagcaacagc agcagcagca gcaccaccac cagtctttgg cagtgttgct 5641 tccagcaaca ccaatactgc acatggagca tcgccaagta cgaacgcatt tgtttttgga 5701 tcggccacaa atacagcagt cacagcaagt ggtacatcgt catttagtag tgcagcagca 5761 aatacctcct tcggatcaaa aaatacattt gtttttggtt caccagcccc actgcaatca 5821 actacagcaa caactgctca aaaagatgca cccaaacctt cattattcgg cgcatttggc 5881 agtggaggta cagcaattac ttcaaatcag gcaaccactt ccatttttgg tagccccgcc 5941 tcttttgcac cagcaactgc ggcaacttct cctccaccag tttttggcag caacaatagt 6001 agcagtatag ttacaacaac aaatcccagc actaacctat tcggtatgaa ttcagcgcca 6061 gcgccagcgc ccgttacaaa catatttggt gcgaacccaa gcggcaatgc cgcaacacca 6121 gcgcccgctt tcggttcttc accatttggt ggtggtggtt cagcatcatc cacaagtgcc 6181 acaccaacat ttggcagtac agcagtaacg ggatccgcta catttggtgg ctttggagca 6241 actgttggaa ataccacaaa cccaagggca gaagtaaaga aaatagaacc agcttttaac 6301 tttggatcag ctcagacaac acagcaaagc gtcagtggag gatttaattt tggatcgacc 6361 tcagccccaa caaaacctgc tttcaacttt ggtagcactg gagcagcaca acccacgttt 6421 aattttacgg ggtcatcaga gacaactcca aatgctcctt tccaatttaa tgcaggagcc 6481 gctcctgtat ctgataatat attcgcacct gcgccaacgc caggagctca aacagcacaa 6541 caagcgaaaa gaaagataag ggcacccata agacgtgtta ctcaacggta gagaatttga 6601 tcaaatcaaa cgctcttaaa agcgtggacc aaatacaaca acaacaacaa ttaccattgc 6661 aacaaccaga aggacacaag caaataggag gacaacaaag cttaaaaccg gaacttgaca 6721 gcaacaaact aaaactagca ccaataccaa cacatacaac aacaacacag cattcaaaaa 6781 aattactaca gttagacgac gacaataacg ttaaacagga caacaggaca cataattccg 6841 attttgacag taagaccgta aaccatgttg ccagtagcaa atatacaaaa ccacaacaac 6901 agaacaacaa caaattccat atcaataacc aaaccctagg gggtataaat cacaaaggcc 6961 aattaaacga aaatgtcaaa aagcaacaaa aaaataacat tgttttaaac aaatataaac 7021 ttgtaagaaa aataaatttc tcagaatcca aaaaggatgt tgcaacatcc ggttctaagc 7081 aaatttctga taataaaaac cctatcaccg gccaagaatc tcttacaaca aacagaaaat 7141 tgcctactgg ggacaagtgg aaatccaaaa caacaaatca ttcaaatcta aatgaagtca 7201 ccaaacctgc aacagtagtt aggcaggtta aaagaaatta tatgaacata gtaaaaggta 7261 ccaattatta ttccaaaatt aacactaaca ctggaaagga gcgggcagtg ggacagcagc 7321 aatatgacgt tgccccctcc gtgtatcaaa cagcagcagc agcacaatta ccttcgatta 7381 gcaacaagag taacaccagt gtccatcaat gtccgtccgt ttgcaaaaat agcataggtt 7441 tttcaggacg acgcgtccgt atggttacta gcgagaaaaa gtagcaccac aagtattggc 7501 cgagaaaagt agagatagat atcaattaca ttctttctca ctagagcaca tgcaatactt 7561 ttcttacttt cacaatgctt tatccacctt tatttttcat tattaacaaa tatacgcaac 7621 atgttgctgg caacacagtc gtaacgaatt tttggtttaa agcacactca aaacaaacac 7681 atcctagaca agagaacaaa caacatctaa ctatgaactg tactacagac tctaagacgc 7741 agacttgaaa tataaataac agagaattaa tctaagcaaa aatataggct aattaaacat 7801 acaaatcaat tttttatgat cgtaatctaa agataactca tcagttcttc aaatgagttc 7861 aagcaaacga tgagatagtt atccgtgtcc acgtcaccaa cgtacgtacg tctatgtcaa 7921 tgtttttttt ttacacagaa tttcttcatg tgcctattgt gagtgtcaac aacatcaaaa 7981 acaagcagtt gaaattgaaa caaaacaaaa ataacagatt gtacggaatg tcttcagaag 8041 tggttttccc tcgacatcgg catcgtgatt atcgtatgga gaaagagaaa acaatatctt 8101 cttctttata tatatataaa tgcatataga attcaattgt ttctattaat ttcatttatt 8161 aaagtttcct agaaattgtt aatttttgta agaaaaatta taagttgttt attttgaatt 8221 tgcattttgg caaagtaaca acagcgttag cgtcagcgtc agtcagcatc aaaacaaaaa 8281 tatagatggg gcgactcggt ctctcgaata ctattttcca aaccgaaagg tggtgaaatt 8341 tgtgaaacgc tgcattgacg caaatccaaa aacagagaaa tcaattcaat aaatttcaat 8401 ttaagtatac tatacctaat attttaaaat tttgttatga aaaagctctt attaaatatt 8461 ttttatatat atttaaaaaa aagtagattg ttttcgtctt ttctaatttc atcattgatt 8521 attcataaat atcaaatttg ttaaagtaaa atttttattt aatttttcta ctactttttt 8581 ttttattact actcttaccg ttcagctacc acattcatcc atccatccaa caataagaaa 8641 acccgaaaaa tccgcaacac tacaagttat cgtcgcactt tgttttttaa acccctctct 8701 ctacctgttc gccactcccc ccataatttg tgtgtataca tttcgaaata agagattttt 8761 atttttttta ttgctatcat gatataaaaa tactaaatat aaatacactt atacacatac 8821 atattaataa tatggcgtac aacaacaaca acaaacaaga atgaaaagaa agtttataaa 8881 gagtaataaa attaaaagtg aagagttaaa tttatgtaaa taagtaaata tattgcaaaa 8941 ctattcataa aaatctaata ctgaaatata tttaatgaaa