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LOCUS XM_013249152 9054 bp mRNA linear INV 02-SEP-2023 (LOC106085108), transcript variant X1, mRNA. ACCESSION XM_013249152 VERSION XM_013249152.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249152.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9054 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9054 /gene="LOC106085108" /note="nuclear pore complex protein Nup153; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106085108" CDS 720..6665 /gene="LOC106085108" /codon_start=1 /product="nuclear pore complex protein Nup153 isoform X1" /protein_id="XP_013104606.2" /db_xref="GeneID:106085108" /translation="MKMSEYGLDEDSSPSQQQIGGEAHNLSTDDPTNAANNSIIGKVK SRVSSILPNSLSKWFSPSSKVRSEELNGSLNCNATTTRRKRRIDIDDDEDEEEENENY VERQARRGIHEENHNIRCKMEENSEAEEDEEDDDDDDSQNSEEEYNATVAAQKTRHDL FGRQPPAKRSRLQIDMRDSPLIAPRRPLIASTPAVASTYTRNSIGTTSASRSSYQRYT HLNLYGNQSKKEQAYNFNIQKDTAAPKINTDIIDLISQPPNEIEERLAANSDICSRTA RSSRKSLNIPTSANRSVADRLLAPATHLKRPSLSSATLDTMLPSNPVGTPPRRTSTTI HEVKESVEHSALGEADDENNELSHNGQLLNEEPNEPSCSKRAKRQNHINGSGFNNPRS IPEENDAILLDTASESSESGTTELNKSKHERKTGLFNTSIAGTGTTRNSSRTSSFGNG LNFYSHLEGKKSLFNSASGHGMSNQLNNSTLSLNSLNRRQFNASIYGSTSALSDSRLL NTFSPFYKGKTTYGGAAAYNKYTAGAGASAVRITPTLIRPASSLSTLSSSNNSLSTAG IGNPQQIGEISNISSTAKRILDLINDFATPLSEAKKMASTIKTNAYLPPQAKSRLNDS DLNASRAMRLSQVRTPYARPAVILQPSGNANIGSRGSTMLSGPTPPVRELQVPTMSQL LQMKKIQNMTERARKITRDSSATNAEVVEYTLPVTTKTAESAKVAAVEDSGGRSSGAS EKQPQPQLQQKHTNKIKNKITTTMRASVASKDIHDEAPPPTLNLPNIAFPLMQSVPKF DIQFSTSPTLTSATSHANSVSTEGGKTTPKPLSSNISQIAFNTKPISTTSVDSVGKKE TTTTKSYNFGSGVSTSSAPTTTLNFKFSEPLVVKGLNTPTQNITPSNLDNYKFSPPLE VTQSMTPTKTTPLLKPQQPQLKSGSCLDVLNKPLALPGNSNKTTTESSTSASLSSNSF GDKFKKASNEWECGTCMIRNKADLPKCVACETPRKSDPTPVSESNISTFGDKFKKSSS EWECDTCMIRNKQESIKCVACETPRKGLSSSTTNNIAVLPPIKNTFGDAFKPKSGSWE CSTCLISNKSDSNECVACQTKKPGSSISSSGNTTTTATTAAPSVSTFKFGFSAAQTTN VPTTTDAGFKNIAAQQKASKWECDACMTRNDAERTKCACCEQPKPGSVATESSSSTTK FTFGATAAAKFSFGFGPGSNAPKEDELRKDKAVDSVAKNAMSITSKAANNNTTLPTSG FQFGFKPTPTLNTENKTDEMDTKNTKSSVATSSSTVLKGFQFGSVTETTKKPEVPSTT ATTFVSSGFNFGTKTSNAPTTTTTTATTSTSTSVKMSKPAVSSPSVKFNLPTTGTTFS FASNSSSATTGVVSFGTKPAVPAPTDEKKSEGFAFKTPAAVSSSTTSNTGASSGGFTF GSPAASSSTAITPAITSSTSTTPTTTALVKPMFSFGTSNTTPATSSVVATTTTSSGGF GSFSFGGNNTPSTAVKPLFGAVTSTTSTTTSASSNTSTKPAATTNVFGSFAGTTSATP TFGSSSAIANPANNSTAVSSSTNSSNMSVNNATPTFGTFGVGSNSANNTTNVFGSFGS SSTQSNSTQNKPAAATAAAAAPPPVFGSVASSNTNTAHGASPSTNAFVFGSATNTAVT ASGTSSFSSAAANTSFGSKNTFVFGSPAPLQSTTATTAQKDAPKPSLFGAFGSGGTAI TSNQATTSIFGSPASFAPATAATSPPPVFGSNNSSSIVTTTNPSTNLFGMNSAPAPAP VTNIFGANPSGNAATPAPAFGSSPFGGGGSASSTSATPTFGSTAVTGSATFGGFGATV GNTTNPRAEVKKIEPAFNFGSAQTTQQSVSGGFNFGSTSAPTKPAFNFGSTGAAQPTF NFTGSSENSAKPFQFGAIPSAPVFNFGGGAIETTPNAPFQFNAGAAPVSDNIFAPAPT PGAQTAQQAKRKIRAPIRRVTQR" polyA_site 9054 /gene="LOC106085108" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgctccttc ttcgtctgaa accgaataga ccacgcgaat cgactttttt ctcatggctt 61 cttaaaattt taaataaaat agcaacaatc aatgttttat aaactaattg tgcaaattat 121 tcaactccag ctaaagttat tttaatttaa aagcaaggac caacgaattt tggatcataa 181 accttggaag tcattgtgtt tcttcaactg tcagcaagtc accaaacgca aatctaagca 241 aaaaaagaaa gaaagaacga gcgagcgaaa accacttaaa cggcaagagg ggctaaaacc 301 aaagccaaat ttgtataaaa tctagaaatc tttgaaacat caatcttcac agttttcttt 361 aaaaagtgat tagtgtatta agtttataat taatgtgttt accaaatata agcagagata 421 ttgcggatga catatctacc agcgtcatat tcgtcaggat ttcataagga aaaatttaat 481 caaaatatga aattcaataa atcacatcgt aatatttaaa aaatacgagt taagaagacg 541 ccaaaactcc aagctctagg gggtgcgtgt gtgcatgcat gcgtcaacag tgtaacctcg 601 ctgcgctgta tgggaattac aattaaaggt gctgcctgtg tttagatttc agcacaagca 661 gatatttcgc aatatataca tttaatttat caattatttc aattgttgat aaagtataga 721 tgaaaatgtc ggaatatggt ctggacgaag acagtagtcc atcccaacaa cagattggcg 781 gtgaagcaca caacctcagc acagacgatc caacgaatgc agctaacaat tcaataattg 841 gaaaagtaaa gtccagagta tctagcattt tgccaaatag tttgtcaaag tggttttcac 901 cttcttcgaa agtgcgtagt gaagaattaa atggtagctt aaactgtaat gcaaccacca 961 ccaggagaaa acgtcgcata gatatcgatg acgatgaaga tgaggaggag gaaaatgaga 1021 attacgttga aaggcaagca agacggggaa tacatgagga gaatcataat ataaggtgta 1081 aaatggaaga aaattccgaa gctgaagagg atgaagagga cgacgatgat gatgatagtc 1141 aaaacagtga ggaagaatat aatgcaactg tagcagcaca aaaaacaagg catgacttgt 1201 ttgggcgaca gccacctgct aaaagatccc gtcttcaaat cgatatgcga gacagcccct 1261 tgattgcacc tcgaagacca ttgatagcat ccactccagc tgtagccagt acgtatacac 1321 gtaattcgat tggcactacc tcagcttcac gttcaagtta tcaacggtac acacatttaa 1381 acctatatgg aaatcaaagc aaaaaggagc aggcgtataa ttttaatata caaaaggata 1441 cagcagcccc gaaaattaat acagatataa ttgacttaat atcacaacca cctaatgaaa 1501 tcgaagaaag acttgcggct aattcggata tatgtagccg aactgcaaga agctctcgta 1561 aaagtttaaa tataccaact tctgcaaatc gatcggtagc agatcgtttg cttgcgccag 1621 ctacccattt gaagaggcca tcattgtcat cggctacctt ggatacaatg ctgcctagca 1681 atccagttgg cactcctccc agacgtacat caactaccat acacgaagtc aaggaatctg 1741 tagaacacag cgcactgggc gaagcggatg acgagaacaa tgaacttagc cataatggtc 1801 aattattgaa tgaagaacca aacgagccat cctgttcgaa gagagccaaa agacaaaatc 1861 acataaatgg ttctggtttt aataatccac gaagcatacc cgaagaaaac gacgctattt 1921 tattggacac tgcctcagaa agcagcgaaa gtggtacgac agagttaaat aaatcaaaac 1981 atgagcgtaa gactggtctc tttaatactt caattgccgg tactggaact actcgtaata 2041 gcagtagaac atcatcattt ggtaatggtt tgaatttcta ttctcattta gaaggaaaga 2101 aatcattatt taactctgcc tctggtcatg gcatgtcaaa tcagttaaac aattctacgt 2161 tgtctcttaa ctccctaaat cgccgacaat ttaatgcttc gatttatggc agcacatcgg 2221 cattgagtga tagtcgtttg ttgaatacat tttcgccttt ttataaaggc aaaactacat 2281 atggtggggc agcagcgtat aacaaatata cggctggtgc aggcgccagt gctgtacgta 2341 taacccccac actgattaga cccgcatcga gtctttccac tctctcatca tcgaataatt 2401 cattatccac cgctggtata ggaaaccctc aacaaattgg cgagatttca aatatatcat 2461 ctactgctaa acgcatattg gatttaatca atgattttgc cacaccctta agtgaggcca 2521 agaaaatggc aagtaccatc aagacaaatg cttatctgcc acctcaagca aaatcccgat 2581 taaatgactc tgatttgaat gcttcacgtg ccatgcgttt gtcccaagtg cgtacaccct 2641 atgcccgccc ggcggtgatt ttacaaccct caggcaatgc aaatattgga agtcgtggca 2701 gtactatgtt aagtgggcca acgccacctg tgagggagct acaggttccc acaatgtcac 2761 agttattgca aatgaagaag atacaaaata tgactgaaag agccagaaaa ataacacgag 2821 attcgtctgc gacaaatgcc gaagtagttg aatacacatt gcctgtaact acgaaaactg 2881 cagaaagtgc gaaagttgct gcagtagaag acagtggtgg tagatctagt ggtgcgtctg 2941 aaaaacaacc acaaccacaa cttcaacaaa agcacacaaa taaaataaaa aataaaataa 3001 cgactacaat gcgagcttcg gtggcatcaa aagacataca cgatgaagca ccaccgccca 3061 cgttaaattt gccaaatata gctttcccac ttatgcaatc tgtacccaaa ttcgatatac 3121 aattttcgac gtcgcccact ttaacgtcag ctacgtcaca tgcgaatagc gtttccacag 3181 aaggcggcaa aacaactcca aaacctttgt catcaaatat aagccaaatt gcatttaata 3241 cgaaaccaat ttcaacaaca tcggtggatt cggtagggaa aaaggaaact acaacaacaa 3301 aatcctataa ctttggtagt ggtgtttcaa cgtcgtctgc acccacaacc acgttaaatt 3361 tcaaattttc cgaacctttg gtagtgaaag gactgaacac tcctacgcaa aacataactc 3421 cttctaattt agataattat aaatttagtc ctccattgga agttacacag tcaatgacac 3481 ctactaaaac aacaccacta ctgaaaccac aacaacctca acttaaatct ggctcttgtc 3541 tggacgtctt aaacaaacca ctggcattgc ccggcaattc aaataaaaca actactgagt 3601 cctcaacatc agcatcgtta tcttcgaatt catttggtga taaatttaag aaagcctcca 3661 atgaatggga atgtggcaca tgtatgatac gcaataaggc ggacctgcct aaatgtgtag 3721 catgtgaaac tccacgcaaa tctgacccaa ccccagtcag tgagagcaat atatcgactt 3781 tcggagataa gtttaaaaaa tcgtcctccg agtgggagtg cgatacgtgt atgatacgaa 3841 acaagcagga aagtattaaa tgtgtggctt gtgaaactcc ccgcaaagga ttgagttctt 3901 caacgactaa caatatagcc gtgttgccgc caataaaaaa tacatttggt gatgccttca 3961 aaccgaaatc aggctcatgg gaatgctcca cttgtttaat tagcaataag agcgactcaa 4021 atgagtgcgt tgcgtgtcaa acaaaaaaac caggttcgtc aatttccagc agtggtaata 4081 ctacaacaac ggcgactaca gctgctccat ctgtatctac atttaaattt ggattctctg 4141 cggcgcaaac aactaatgta ccaacaacta ccgacgctgg ctttaagaat atcgcggctc 4201 aacaaaaagc ttcaaaatgg gagtgtgatg cttgtatgac acgcaatgat gcggagcgaa 4261 cgaagtgtgc ttgttgtgaa cagccgaaac ccggctcggt ggcaacagaa agctcatctt 4321 ctacaacaaa atttacgttt ggagcaacgg ctgctgccaa gtttagtttt ggctttggcc 4381 cgggctcaaa tgcaccaaag gaagatgaac tacgaaaaga taaagctgtt gattcagtgg 4441 ccaaaaatgc catgtctata acatccaaag ctgcgaacaa caacaccact ttacctacgt 4501 ctggttttca atttggattt aaaccgactc ctactctgaa cacggaaaat aaaacggacg 4561 aaatggatac taagaacacc aaaagctctg tggcaacctc aagttctaca gtgttgaagg 4621 gctttcaatt tggcagtgtg actgagacaa caaagaaacc tgaggtcccg tcaacaactg 4681 ctaccacatt tgtatcgtca ggttttaatt ttggtaccaa gacgagcaat gcgccaacaa 4741 ctacaaccac aaccgcaaca acgtcaacat caacatctgt gaaaatgtct aagcctgctg 4801 taagctcgcc aagtgttaag tttaatttgc ctacaactgg gaccacattc agttttgctt 4861 ctaattcatc atccgcaact actggagttg ttagttttgg aactaagccc gctgttcccg 4921 ctccaacaga cgaaaagaag tcagaaggtt tcgcatttaa gacgccagca gctgtatcat 4981 cgtctaccac aagtaacacc ggcgcttcat cgggcggatt tacgtttggt tcgccagctg 5041 catcatcatc cactgctatc acaccagcta taactagtag tacatccaca acgcctacca 5101 caacagcgtt ggtaaaacca atgtttagtt ttggaacatc aaatacaact ccagcgacat 5161 catcagttgt tgccacaacc actacgtcgt ctggcggttt tggaagtttc agcttcggtg 5221 gcaataacac accctctacg gctgttaagc ccttatttgg ggctgtaacg tctacaacat 5281 cgacaacaac ttcagcttct tcaaatacaa gtacaaagcc tgccgccaca acaaatgtat 5341 ttgggtcgtt tgcaggaaca acctctgcaa caccaacatt tggttcctcc tctgctattg 5401 ctaatcctgc caataattca acagctgtta gttcctccac caacagttcc aatatgagcg 5461 taaataatgc tactcctaca tttggaacat tcggagtggg tagtaattca gccaacaata 5521 caacgaatgt atttggttcc tttggtagca gcagtaccca atcaaattca acccaaaata 5581 aacccgcggc agcaacagca gcagcagcag caccaccacc agtctttggc agtgttgctt 5641 ccagcaacac caatactgca catggagcat cgccaagtac gaacgcattt gtttttggat 5701 cggccacaaa tacagcagtc acagcaagtg gtacatcgtc atttagtagt gcagcagcaa 5761 atacctcctt cggatcaaaa aatacatttg tttttggttc accagcccca ctgcaatcaa 5821 ctacagcaac aactgctcaa aaagatgcac ccaaaccttc attattcggc gcatttggca 5881 gtggaggtac agcaattact tcaaatcagg caaccacttc catttttggt agccccgcct 5941 cttttgcacc agcaactgcg gcaacttctc ctccaccagt ttttggcagc aacaatagta 6001 gcagtatagt tacaacaaca aatcccagca ctaacctatt cggtatgaat tcagcgccag 6061 cgccagcgcc cgttacaaac atatttggtg cgaacccaag cggcaatgcc gcaacaccag 6121 cgcccgcttt cggttcttca ccatttggtg gtggtggttc agcatcatcc acaagtgcca 6181 caccaacatt tggcagtaca gcagtaacgg gatccgctac atttggtggc tttggagcaa 6241 ctgttggaaa taccacaaac ccaagggcag aagtaaagaa aatagaacca gcttttaact 6301 ttggatcagc tcagacaaca cagcaaagcg tcagtggagg atttaatttt ggatcgacct 6361 cagccccaac aaaacctgct ttcaactttg gtagcactgg agcagcacaa cccacgttta 6421 attttacggg gtcatcagag aattcagcga aaccctttca attcggcgca ataccatcgg 6481 caccagtatt taattttggc ggtggtgcga tagagacaac tccaaatgct cctttccaat 6541 ttaatgcagg agccgctcct gtatctgata atatattcgc acctgcgcca acgccaggag 6601 ctcaaacagc acaacaagcg aaaagaaaga taagggcacc cataagacgt gttactcaac 6661 ggtagagaat ttgatcaaat caaacgctct taaaagcgtg gaccaaatac aacaacaaca 6721 acaattacca ttgcaacaac cagaaggaca caagcaaata ggaggacaac aaagcttaaa 6781 accggaactt gacagcaaca aactaaaact agcaccaata ccaacacata caacaacaac 6841 acagcattca aaaaaattac tacagttaga cgacgacaat aacgttaaac aggacaacag 6901 gacacataat tccgattttg acagtaagac cgtaaaccat gttgccagta gcaaatatac 6961 aaaaccacaa caacagaaca acaacaaatt ccatatcaat aaccaaaccc tagggggtat 7021 aaatcacaaa ggccaattaa acgaaaatgt caaaaagcaa caaaaaaata acattgtttt 7081 aaacaaatat aaacttgtaa gaaaaataaa tttctcagaa tccaaaaagg atgttgcaac 7141 atccggttct aagcaaattt ctgataataa aaaccctatc accggccaag aatctcttac 7201 aacaaacaga aaattgccta ctggggacaa gtggaaatcc aaaacaacaa atcattcaaa 7261 tctaaatgaa gtcaccaaac ctgcaacagt agttaggcag gttaaaagaa attatatgaa 7321 catagtaaaa ggtaccaatt attattccaa aattaacact aacactggaa aggagcgggc 7381 agtgggacag cagcaatatg acgttgcccc ctccgtgtat caaacagcag cagcagcaca 7441 attaccttcg attagcaaca agagtaacac cagtgtccat caatgtccgt ccgtttgcaa 7501 aaatagcata ggtttttcag gacgacgcgt ccgtatggtt actagcgaga aaaagtagca 7561 ccacaagtat tggccgagaa aagtagagat agatatcaat tacattcttt ctcactagag 7621 cacatgcaat acttttctta ctttcacaat gctttatcca cctttatttt tcattattaa 7681 caaatatacg caacatgttg ctggcaacac agtcgtaacg aatttttggt ttaaagcaca 7741 ctcaaaacaa acacatccta gacaagagaa caaacaacat ctaactatga actgtactac 7801 agactctaag acgcagactt gaaatataaa taacagagaa ttaatctaag caaaaatata 7861 ggctaattaa acatacaaat caatttttta tgatcgtaat ctaaagataa ctcatcagtt 7921 cttcaaatga gttcaagcaa acgatgagat agttatccgt gtccacgtca ccaacgtacg 7981 tacgtctatg tcaatgtttt ttttttacac agaatttctt catgtgccta ttgtgagtgt 8041 caacaacatc aaaaacaagc agttgaaatt gaaacaaaac aaaaataaca gattgtacgg 8101 aatgtcttca gaagtggttt tccctcgaca tcggcatcgt gattatcgta tggagaaaga 8161 gaaaacaata tcttcttctt tatatatata taaatgcata tagaattcaa ttgtttctat 8221 taatttcatt tattaaagtt tcctagaaat tgttaatttt tgtaagaaaa attataagtt 8281 gtttattttg aatttgcatt ttggcaaagt aacaacagcg ttagcgtcag cgtcagtcag 8341 catcaaaaca aaaatataga tggggcgact cggtctctcg aatactattt tccaaaccga 8401 aaggtggtga aatttgtgaa acgctgcatt gacgcaaatc caaaaacaga gaaatcaatt 8461 caataaattt caatttaagt atactatacc taatatttta aaattttgtt atgaaaaagc 8521 tcttattaaa tattttttat atatatttaa aaaaaagtag attgttttcg tcttttctaa 8581 tttcatcatt gattattcat aaatatcaaa tttgttaaag taaaattttt atttaatttt 8641 tctactactt ttttttttat tactactctt accgttcagc taccacattc atccatccat 8701 ccaacaataa gaaaacccga aaaatccgca acactacaag ttatcgtcgc actttgtttt 8761 ttaaacccct ctctctacct gttcgccact ccccccataa tttgtgtgta tacatttcga 8821 aataagagat ttttattttt tttattgcta tcatgatata aaaatactaa atataaatac 8881 acttatacac atacatatta ataatatggc gtacaacaac aacaacaaac aagaatgaaa 8941 agaaagttta taaagagtaa taaaattaaa agtgaagagt taaatttatg taaataagta 9001 aatatattgc aaaactattc ataaaaatct aatactgaaa tatatttaat gaaa