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LOCUS XM_013249146 5715 bp mRNA linear INV 02-SEP-2023 protein 6 homolog (LOC106085105), transcript variant X2, mRNA. ACCESSION XM_013249146 VERSION XM_013249146.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249146.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5715 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5715 /gene="LOC106085105" /note="receptor-mediated endocytosis protein 6 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085105" CDS 135..5486 /gene="LOC106085105" /codon_start=1 /product="receptor-mediated endocytosis protein 6 homolog" /protein_id="XP_013104600.1" /db_xref="GeneID:106085105" /translation="MESNTEGNLLEIMDLARTLRQEQLFIQQEQATFVQLTETLSENS ASITKLAYICAQQRRNLNDLIVSRPELGPSLCCRRAKNYGNSNFVDSKKVLNYEHAIA YEELFNYLYKSPYILAVSLATGDSISEISPAHMNSVIQTISTGLFGNAINSKDVEMIL KLLRELIEIQIVTSDNPRRLLRANASSFSRIYHRLNESMFSAKIFLTAALFQPIMSVL TETDTILDVDPQKVIQRFSTKERIRRFGPEDSAAYADNVDKFHAETIGKLHSLAKTFI DSLLCNWSLFPSTLRWLVQTMCHQLKQSHNFSERIMNEIITDMVFTHFICPAIVSPDA LGIIDAPISEQVRFNLMQIGQIVQMLALIKHDDIDPRYAEVYRKFESNTVTRLIDLLL VTQTGEDVVAILAQQSDFDRAQLMATQRELSYFAEFFRILTAAEEYAIPEEDKEKLKK IMKNLPESQGHRHQNGEAQQAGAATESPFKEKSKPSLISKATKTKLAKTMSFAHNGGS SHNAEAVNGLLNGNHVPKSNGLEANRSNHNSNHSSPTRSVAPEIVDNEPILIFTLYNR SDQKLQPLSEEEVLKMNSIGQDINNSDLVDTENYQQESTVDKSSVVNGFDGIDGMSDV LRPLHNKTARFSLSHDDASIVNSDNLEAVSEVPSNHSVTSSLELEENVENDNLSDMVS ANVSGRGTPNISGRDTPSSQVTDGESLNNALPTPQMQKLISKARSDIEDKFCKFEIKK FEGDETVSIISDTWSTDVLASDSETVDAVERERERNFSTPLIPAAVILPGDNNFDVRA GYLDASDQRSESNWSTDVLASDSEKLNEVDTDDNISITARSDTQVSVRSERERDQLAA AISSGPMNRHGRSSIPSQFPPTVRRNVRAFRPLAASHGIGPAKPPSTGSVDDVNVSGG SSGGNASDRSQEDSAFYDAINSYDDNSNQMANNPNLHHYRDGSSLARSSVRTTNHMGA AEDSFQQNYKSIANEGDKDTFLSPSTSSAAAAHMHRNRMRRQTSAESSISNQSLSLEE QATGAAKLPQAPAMSSSSSRKKRHQSNISNESKDLIDFSDFVDDKDLTPPSMAPPDPP LLEGLPDDGLVERRNTSTLQRNAGDDGRRNGIMALKGGRESSERGSNSTPYLRRHQSL NYENHEIVLNTVPSRVSAMPNLSPPSDEKPSSQQQEQRHAYELLLLCGKTSEMNLQDN DLTDNVNEAARNTPTNIVVSSSSIMMPSTSSSKPNKSTGAIPKSISFDASADKTHGPS TSSASTSARQQRSAIGRLPDATSLRTIGTPNINSNSSIFNKLKQGIFKHRRGHKSRHL TSNSEDISQCSRSVSFSNNTSEVSLDLLGANLPGTSSSAAQGSGVGYYDISEDILAKY RRKVSTSSEATNSSIGNGIAGAMGGGIANDVLGKEDMSNNQHPSMHDKTLTFNIIKKK IRTVLSKTDLHSGDFRHTTHANISPLLTYLQIQLAQAINLQNFQQISYVSEAIRCIST LDVAQHTQIMAELQNDMQKRQNYLQYLMRYRQNLLMVMENIEQFESRLHSESLTCNRY LMAVCMRIFFDKRQDRLSTFQEDFARLTVSDDKVDLIEEFLDSLIEELVAPGGILYGM PEWQVIESRLSLERILLQNMYQQVMFPNEDADLSRDSVLSEHIRKLQNVITPSHPALR IPQMYLSEAPWSFAQQQLKFISAYKTPREKLQCVERCISSIINLLHMSSARVPATDDL LPVLIYVVIMANPPYLLSTVEYISCFIGSKLDGEEHFHWTLFDSVVKFIKTMDYSEH" misc_feature 402..1508 /gene="LOC106085105" /note="Ras GTPase Activating Domain; Region: RasGAP; cl02569" /db_xref="CDD:470620" misc_feature order(549..551,666..668,672..674,678..683,699..701, 708..710,720..722,1074..1076,1098..1103,1110..1115, 1122..1124,1185..1187,1194..1199,1206..1208,1218..1220, 1224..1226,1236..1241) /gene="LOC106085105" /note="RAS interface [polypeptide binding]; other site" /db_xref="CDD:213179" misc_feature 5169..5471 /gene="LOC106085105" /note="Vacuolar sorting protein 9 (VPS9) domain; Region: VPS9; pfam02204" /db_xref="CDD:460489" polyA_site 5715 /gene="LOC106085105" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaaaggaagc aagaaggagt cttgcaatat ttaatgttta acaaggatca actggcaatc 61 cattgcggaa tattcatttc gttattttga tacatcttga ctaaggatta attcaaccgc 121 tgcctagcgt aactatggaa tcgaatacgg aaggaaatct cctagagatt atggatttag 181 cacgtacact acgccaagag caattattca tacaacaaga gcaggcaaca tttgtacaac 241 tcaccgaaac gttgtcagaa aattccgcat cgataacaaa gttggcttat atttgtgccc 301 aacaaaggcg aaatcttaat gatctgattg tgtcacgtcc cgaattgggt ccctcattgt 361 gttgccgtcg agccaaaaat tatggaaatt cgaattttgt cgattccaag aaggtgttaa 421 attacgagca tgccattgct tatgaggaac tcttcaatta tctctacaaa tctccataca 481 ttttggccgt atcacttgct accggcgata gcatttcaga aatctcaccc gcccatatga 541 actctgtcat acagactatt agtactggat tatttggcaa tgccatcaac agcaaggatg 601 tggagatgat tttgaaactg ttgagagaac tcattgaaat acaaattgtt accagtgata 661 atccacgaag attgcttcga gccaatgctt catctttttc tcgtatttat catcgcttaa 721 atgagtcgat gttttcagcg aaaatttttt tgacggcggc attatttcag cccataatga 781 gtgtgttgac ggaaacggat accatactag atgtggatcc acaaaaagta atacaacgtt 841 ttagtactaa ggagagaata agaagatttg gtcccgaaga ctcagctgca tatgccgaca 901 atgtggataa atttcatgcc gagaccattg ggaaattaca cagcttggcg aaaaccttca 961 tcgatagttt actgtgcaat tggtcactat tcccgtccac actgcgttgg ctagtgcaaa 1021 cgatgtgcca tcaactcaaa caatctcata atttttccga gagaatcatg aatgaaatca 1081 tcaccgatat ggtattcaca catttcatat gtcccgccat agtgagtccc gacgcgctgg 1141 gcatcataga tgcccccatt tcggagcaag tgcgtttcaa tctcatgcaa attggccaaa 1201 ttgttcaaat gctcgcgttg atcaaacatg atgacatcga tccccgctat gctgaggtct 1261 atcgcaagtt tgaatcgaac acggtaacgc gtttgatcga tttgttgttg gtcacgcaaa 1321 caggggaaga tgtggtagcg attttggccc aacaaagtga ttttgatcga gcacagctga 1381 tggccaccca aagagaattg agctatttcg ctgaattctt tcgcatttta accgctgccg 1441 aggagtatgc catacccgag gaggacaaag agaaattgaa gaaaattatg aaaaatttgc 1501 ctgagagtca agggcatcgt catcagaatg gagaagcaca gcaagctggt gcagctacag 1561 aatctccatt taaagaaaaa tccaagccat cccttataag caaggccacc aaaaccaaat 1621 tggccaaaac catgagtttt gctcacaatg gtggtagtag tcataatgct gaagcggtga 1681 atggcttgtt gaatgggaac catgtgccaa aaagcaatgg attggaagca aatagatcca 1741 atcataattc taatcactcc tcacccacta gatctgtggc cccagagatt gttgacaacg 1801 aacccatttt gatatttacc ctctacaata ggagtgatca aaaattacaa cccctttccg 1861 aggaggaagt gctgaagatg aacagcatag gacaggacat aaacaacagc gacttggtgg 1921 acaccgaaaa ctatcaacag gagtctacag tcgataaatc atcggtggtc aatggttttg 1981 atggcatcga tggcatgtca gatgttctac gtcccttaca caataaaact gccaggtttt 2041 cgctttcgca cgatgatgcc tccatagtga actctgataa tctggaggca gtaagtgagg 2101 taccctccaa ccattcggta acaagttctt tggaactcga agagaatgtg gagaatgata 2161 atctatctga tatggtgtcg gccaatgtgt cgggtcgagg cactcccaat ataagtgggc 2221 gtgatacacc ctcgtcccaa gtcaccgatg gagaatcgct caataatgcg ttgcccacac 2281 cccaaatgca aaagttaata tcgaaagccc gctccgacat agaggataag ttttgtaaat 2341 ttgagattaa gaaattcgag ggagacgaaa ctgtttcgat tatatcagac acctggtcaa 2401 cggatgtgct ggccagtgac tccgaaacgg ttgatgctgt tgaacgagaa agggagcgaa 2461 acttttctac accgctgata cccgcggctg tcatactgcc gggagacaat aattttgatg 2521 tacgggcagg ctatttggat gcttcggatc aacgttcaga gtccaactgg agcactgatg 2581 tcttggcttc ggattctgag aagcttaacg aagtggatac cgatgacaat ataagcatta 2641 ctgcaagatc agatacgcag gttagtgtgc gctcggaaag agagcgagat caattggcag 2701 ctgccatatc gtcgggtccc atgaatcgtc atggtcgctc ttctatacca tcgcaatttc 2761 ctcctaccgt tagacgcaat gtgcgagcgt ttaggccttt ggctgccagc catggaatag 2821 ggcctgctaa accaccctct acaggcagtg tggacgatgt caatgttagc ggcggcagca 2881 gtgggggtaa tgcaagtgat cgttcccaag aagattcagc attttacgat gccatcaatt 2941 cttatgatga caattccaat caaatggcca acaaccctaa tcttcatcat tatagggatg 3001 gctcttcgct ggctagaagt tcggtgagaa ccacaaacca tatgggagca gcggaagaca 3061 gttttcaaca gaattacaag agcatagcta atgagggaga caaagacacc tttctgtcgc 3121 caagcacttc ctccgcagcc gcagctcata tgcatcgcaa tcgcatgaga agacaaacat 3181 ctgctgagag tagcatttcg aatcaaagtc taagtttgga ggagcaggca acgggggcag 3241 caaagttgcc acaagcccca gcaatgtcat catcgtcctc gcgtaaaaaa cgccaccaaa 3301 gcaatatcag caatgagtca aaggatttaa tagacttttc cgatttcgtc gatgataagg 3361 atttaacacc gccttcgatg gcaccgccag atcctcccct tctagaggga ctaccggatg 3421 atggcttagt ggaaagacgc aacaccagca ccttgcaaag aaatgccgga gacgatggca 3481 gacgcaatgg cattatggct ttgaagggtg gccgcgaatc cagtgagcgc ggctccaatt 3541 caactcccta ccttcgacga catcaatcgt taaattatga aaatcatgag attgttttga 3601 acaccgtacc cagtcgtgtt tcagccatgc caaatctatc accaccatcc gatgaaaagc 3661 cgtcgtcaca gcaacaagaa caacgccatg cgtatgagtt gctattgctc tgcggcaaaa 3721 cttcagaaat gaatctacaa gacaacgact taacggataa tgtaaatgag gccgcccgta 3781 atactcccac aaatattgtg gtgtcttcta gcagcataat gatgccatca accagttcca 3841 gcaaaccgaa caagtcgacg ggcgccatac ccaaaagcat aagtttcgat gcttcggctg 3901 ataagacaca tggtccttcg acttcgtccg cctcaacgtc tgcaagacaa caaagatcgg 3961 cgataggacg cctgccagat gccacctccc tacgaaccat tggtactcct aatataaact 4021 caaattcaag cattttcaat aaactcaagc aaggcatttt taagcatcga cgtggtcaca 4081 agtcacgtca tctcacatcg aacagcgaag atatatccca gtgttcacgt agtgtctcat 4141 tctccaataa cacatcagag gtttcattgg atctcttggg tgccaattta ccaggaacca 4201 gtagttcggc ggcacaaggt agtggtgtgg gctactatga tatttcagag gatattttag 4261 ccaaataccg aaggaaagtc agtacatcca gtgaggcaac taattcatca atcggcaatg 4321 gtatagcagg agccatgggc ggtggcatag ccaatgatgt cctgggcaaa gaagatatga 4381 gtaataatca acatccctcc atgcatgaca aaactttgac attcaatatt ataaagaaaa 4441 agatacgaac tgtactctct aagactgatt tgcattcagg cgattttaga cacaccactc 4501 atgccaacat ttctccactc cttacatatc tacagataca attggcccag gcaattaatc 4561 ttcaaaattt ccaacaaatt tcttatgttt ctgaggccat acgttgtatt tcgacactcg 4621 atgtggcaca gcacactcaa atcatggccg agctacaaaa tgatatgcag aaaaggcaaa 4681 actatttgca gtatttaatg cgttatcgac aaaatctatt gatggttatg gaaaatatcg 4741 aacaattcga atcgagactg catagtgaga gtttaacctg caaccgctac ttaatggcag 4801 tttgcatgcg aatattcttt gataaaagac aggatcgatt aagcacgttt caggaagatt 4861 ttgcccgtct tacagtgtcc gatgataagg tggatttaat tgaggaattc ctcgatagcc 4921 ttattgaaga gctggtggcc ccagggggta tactatatgg tatgcccgag tggcaagtca 4981 tagagtcacg tttatcgctg gagcgcatac tactgcaaaa tatgtatcaa caagttatgt 5041 ttcccaatga agatgcagat ctgtcgagag atagtgttct atctgagcat atacgcaagc 5101 tacaaaatgt tataacacca tcgcatccgg ctctacgcat accacaaatg tatttatctg 5161 aagccccttg gagttttgcc caacaacagt tgaaatttat atcggcttat aaaactcccc 5221 gagaaaaact gcaatgtgtt gaaagatgta tatcgagtat cataaatttg ctgcatatgt 5281 caagcgctag agtaccagca accgatgacc ttttgcctgt gctcatttac gttgtaatta 5341 tggctaatcc tccttatttg ttatcgactg tcgaatatat cagttgtttt attggcagca 5401 aactagatgg tgaggagcat ttccattgga cactattcga ttcagtggtg aaattcatta 5461 agaccatgga ttattctgag cattaaatga agtagttatg tgtccagtcg aacgtgtttc 5521 attttttcca aatagttgca tattgtttga acattttttt cttattttat ttaaacacta 5581 acagccgtat tcacaagact taattaagcc ttaaaatagg gtttttcaac tgttctataa 5641 agaaaaactc aaataaacct atttcaaatc tgcatgaagt tttgtgcata ccgctgtcag 5701 aacaaaaaac aaaaa