Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans uncharacterized LOC106085096


LOCUS       XM_013249145            1979 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106085096), transcript variant X2, mRNA.
ACCESSION   XM_013249145
VERSION     XM_013249145.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249145.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1979
                     /gene="LOC106085096"
                     /note="uncharacterized LOC106085096; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:106085096"
     CDS             72..1652
                     /gene="LOC106085096"
                     /codon_start=1
                     /product="uncharacterized protein LOC106085096"
                     /protein_id="XP_013104599.2"
                     /db_xref="GeneID:106085096"
                     /translation="MSARNIRKWREEIEAHINDGTYKLAEVQKVSQRRSPVWNIFIKV
                     MDENGCILDRAVYCRHCKRVFRAQGNSTTSLMRHNCYRIFSCVPSQVEEQEKAIEKKT
                     KTYRKRVKAIPSAYHDANKFEYSFDFELLNTTIGKGLRGGTYVLQPNKESNDPIWSRF
                     AFVAMKGNVESILKDVVCCNQCHTILKYHDPSGVKYLYEHECGKEDKLKISFKIKTGL
                     YKLKQRHCSKSNVWKLFALISKDDNTVMKDYVYCTACAEILPYTVRSTKKLKTHKCFV
                     QLGFHVTEDIRPVVDIEGKGLQNLVTPWPNAKKIVTKSSKAIYPTSVKPTNHMTTDFG
                     MKVLQKSIEHKIRAGCYKLKGIPEFPPRSIYAFITKEDGNTLGGMVSCRQCLQILIYD
                     GINDEELKLHAKRHTSSQTQQQQHVTVAEEEIKIEETQLAENNQLHSIIIREEINFEE
                     APPLTHQQYSENSVEFMQSNDYVEQFVDETQVKEEYSFVDSNYNQYPVFIIEELEDPT
                     DDYVKQEDESQELLYYQN"
     polyA_site      1979
                     /gene="LOC106085096"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtattgttca gcacatgagt tgtcggaggg aaattctgaa ttcctgagtt gccttaaggt
       61 ttgcatgaat aatgtctgct cgaaacatcc gaaaatggcg ggaagaaatt gaagcacaca
      121 tcaatgatgg cacttacaag ctggcggaag tacaaaaagt ttcgcaacga cgaagccccg
      181 tatggaacat tttcattaaa gtgatggatg aaaatggctg cattctggac agagctgtct
      241 actgtcgaca ttgtaaaagg gttttcaggg ctcagggtaa tagcacaacc agcctaatgc
      301 gtcacaactg ttacagaata tttagctgtg tcccttctca agtggaggag caggagaagg
      361 caattgaaaa gaagaccaaa acgtatagga agagagtaaa agccatacca tcagcttacc
      421 atgatgccaa taaatttgaa tatagttttg attttgagct actcaacacc accattggca
      481 agggcttaag aggcggcacc tatgtgctgc agcctaataa agaatccaat gatcccatat
      541 ggtcacgttt tgcctttgtt gctatgaagg gtaatgtaga gagtattttg aaggatgttg
      601 tttgctgtaa ccaatgccat acgatcctta agtaccatga ccccagcgga gtaaaatatc
      661 tttatgagca tgaatgtggc aaggaggata aacttaagat aagctttaaa ataaaaactg
      721 gtctttataa attaaagcaa cgccattgta gcaaaagcaa tgtatggaag ctatttgccc
      781 taataagtaa ggatgataac accgtgatga aggattatgt ctattgtacc gcatgtgcag
      841 aaatattacc ctacacggtc aggagtacaa aaaaattgaa aacccataaa tgctttgttc
      901 aactgggctt ccatgtaact gaagatattc gccccgttgt agatattgag ggtaaaggcc
      961 tacagaactt ggtgacacca tggccaaacg ctaaaaaaat agttacaaag tcgagcaaag
     1021 ctatatatcc aacttctgtt aagcccacaa atcatatgac cacagatttt ggcatgaaag
     1081 tcttacaaaa gagcatcgaa cataaaatta gagctggctg ttataagctt aaaggcattc
     1141 cagagtttcc tccaaggtcc atatatgctt ttataaccaa agaagatggt aacactttag
     1201 gtggtatggt gtcttgtcgt cagtgtttac agattctaat atatgatggt atcaatgatg
     1261 aagaacttaa actacatgcc aagagacata cttccagcca aactcagcag cagcagcacg
     1321 tgactgtggc ggaagaagaa attaaaattg aggaaaccca attggcggaa aataatcaac
     1381 ttcattccat aattataaga gaagagatca attttgaaga agcccccccg cttacccatc
     1441 aacagtattc ggaaaattct gtggaattca tgcaaagcaa tgactatgtt gaacaatttg
     1501 tagatgaaac acaggttaag gaagaatatt cgtttgttga cagcaactat aatcagtatc
     1561 cagttttcat catagaagaa cttgaagatc ctacagatga ttatgttaag caagaagacg
     1621 agagccagga gttgttatat tatcaaaact gaagaagagc ataaaaagga aaaaaacccc
     1681 tctacagcct agctgtcaat gcaaaatctc aagaagtgta ttgaaataca tactcatcta
     1741 taataaataa tattcctata ctttaagatg tattctaatg taaataactg tatttggtat
     1801 cacaatggac gaaaacgtct agagggaatc tgaaggcaga ctgccactta aacctaacct
     1861 aatctaattg tataaagata tatgcctgta tatagcggaa attagaattt attagctgta
     1921 caaaacttgc tacgttgaga ataaaaactg aatttcatga atatagccat aaaacaaaa