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LOCUS XM_013249144 5805 bp mRNA linear INV 02-SEP-2023 protein 6 homolog (LOC106085105), transcript variant X1, mRNA. ACCESSION XM_013249144 VERSION XM_013249144.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249144.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5805 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5805 /gene="LOC106085105" /note="receptor-mediated endocytosis protein 6 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106085105" CDS 225..5576 /gene="LOC106085105" /codon_start=1 /product="receptor-mediated endocytosis protein 6 homolog" /protein_id="XP_013104598.1" /db_xref="GeneID:106085105" /translation="MESNTEGNLLEIMDLARTLRQEQLFIQQEQATFVQLTETLSENS ASITKLAYICAQQRRNLNDLIVSRPELGPSLCCRRAKNYGNSNFVDSKKVLNYEHAIA YEELFNYLYKSPYILAVSLATGDSISEISPAHMNSVIQTISTGLFGNAINSKDVEMIL KLLRELIEIQIVTSDNPRRLLRANASSFSRIYHRLNESMFSAKIFLTAALFQPIMSVL TETDTILDVDPQKVIQRFSTKERIRRFGPEDSAAYADNVDKFHAETIGKLHSLAKTFI DSLLCNWSLFPSTLRWLVQTMCHQLKQSHNFSERIMNEIITDMVFTHFICPAIVSPDA LGIIDAPISEQVRFNLMQIGQIVQMLALIKHDDIDPRYAEVYRKFESNTVTRLIDLLL VTQTGEDVVAILAQQSDFDRAQLMATQRELSYFAEFFRILTAAEEYAIPEEDKEKLKK IMKNLPESQGHRHQNGEAQQAGAATESPFKEKSKPSLISKATKTKLAKTMSFAHNGGS SHNAEAVNGLLNGNHVPKSNGLEANRSNHNSNHSSPTRSVAPEIVDNEPILIFTLYNR SDQKLQPLSEEEVLKMNSIGQDINNSDLVDTENYQQESTVDKSSVVNGFDGIDGMSDV LRPLHNKTARFSLSHDDASIVNSDNLEAVSEVPSNHSVTSSLELEENVENDNLSDMVS ANVSGRGTPNISGRDTPSSQVTDGESLNNALPTPQMQKLISKARSDIEDKFCKFEIKK FEGDETVSIISDTWSTDVLASDSETVDAVERERERNFSTPLIPAAVILPGDNNFDVRA GYLDASDQRSESNWSTDVLASDSEKLNEVDTDDNISITARSDTQVSVRSERERDQLAA AISSGPMNRHGRSSIPSQFPPTVRRNVRAFRPLAASHGIGPAKPPSTGSVDDVNVSGG SSGGNASDRSQEDSAFYDAINSYDDNSNQMANNPNLHHYRDGSSLARSSVRTTNHMGA AEDSFQQNYKSIANEGDKDTFLSPSTSSAAAAHMHRNRMRRQTSAESSISNQSLSLEE QATGAAKLPQAPAMSSSSSRKKRHQSNISNESKDLIDFSDFVDDKDLTPPSMAPPDPP LLEGLPDDGLVERRNTSTLQRNAGDDGRRNGIMALKGGRESSERGSNSTPYLRRHQSL NYENHEIVLNTVPSRVSAMPNLSPPSDEKPSSQQQEQRHAYELLLLCGKTSEMNLQDN DLTDNVNEAARNTPTNIVVSSSSIMMPSTSSSKPNKSTGAIPKSISFDASADKTHGPS TSSASTSARQQRSAIGRLPDATSLRTIGTPNINSNSSIFNKLKQGIFKHRRGHKSRHL TSNSEDISQCSRSVSFSNNTSEVSLDLLGANLPGTSSSAAQGSGVGYYDISEDILAKY RRKVSTSSEATNSSIGNGIAGAMGGGIANDVLGKEDMSNNQHPSMHDKTLTFNIIKKK IRTVLSKTDLHSGDFRHTTHANISPLLTYLQIQLAQAINLQNFQQISYVSEAIRCIST LDVAQHTQIMAELQNDMQKRQNYLQYLMRYRQNLLMVMENIEQFESRLHSESLTCNRY LMAVCMRIFFDKRQDRLSTFQEDFARLTVSDDKVDLIEEFLDSLIEELVAPGGILYGM PEWQVIESRLSLERILLQNMYQQVMFPNEDADLSRDSVLSEHIRKLQNVITPSHPALR IPQMYLSEAPWSFAQQQLKFISAYKTPREKLQCVERCISSIINLLHMSSARVPATDDL LPVLIYVVIMANPPYLLSTVEYISCFIGSKLDGEEHFHWTLFDSVVKFIKTMDYSEH" misc_feature 492..1598 /gene="LOC106085105" /note="Ras GTPase Activating Domain; Region: RasGAP; cl02569" /db_xref="CDD:470620" misc_feature order(639..641,756..758,762..764,768..773,789..791, 798..800,810..812,1164..1166,1188..1193,1200..1205, 1212..1214,1275..1277,1284..1289,1296..1298,1308..1310, 1314..1316,1326..1331) /gene="LOC106085105" /note="RAS interface [polypeptide binding]; other site" /db_xref="CDD:213179" misc_feature 5259..5561 /gene="LOC106085105" /note="Vacuolar sorting protein 9 (VPS9) domain; Region: VPS9; pfam02204" /db_xref="CDD:460489" polyA_site 5805 /gene="LOC106085105" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgccaaccag aaggcttcgg ctttgttcac tggtcgcagc aataaatgta aatagtaaat 61 cggaaagttg aagattaatg tttattagtg ataagacaac agaaaaaaat cttgcaatat 121 ttaatgttta acaaggatca actggcaatc cattgcggaa tattcatttc gttattttga 181 tacatcttga ctaaggatta attcaaccgc tgcctagcgt aactatggaa tcgaatacgg 241 aaggaaatct cctagagatt atggatttag cacgtacact acgccaagag caattattca 301 tacaacaaga gcaggcaaca tttgtacaac tcaccgaaac gttgtcagaa aattccgcat 361 cgataacaaa gttggcttat atttgtgccc aacaaaggcg aaatcttaat gatctgattg 421 tgtcacgtcc cgaattgggt ccctcattgt gttgccgtcg agccaaaaat tatggaaatt 481 cgaattttgt cgattccaag aaggtgttaa attacgagca tgccattgct tatgaggaac 541 tcttcaatta tctctacaaa tctccataca ttttggccgt atcacttgct accggcgata 601 gcatttcaga aatctcaccc gcccatatga actctgtcat acagactatt agtactggat 661 tatttggcaa tgccatcaac agcaaggatg tggagatgat tttgaaactg ttgagagaac 721 tcattgaaat acaaattgtt accagtgata atccacgaag attgcttcga gccaatgctt 781 catctttttc tcgtatttat catcgcttaa atgagtcgat gttttcagcg aaaatttttt 841 tgacggcggc attatttcag cccataatga gtgtgttgac ggaaacggat accatactag 901 atgtggatcc acaaaaagta atacaacgtt ttagtactaa ggagagaata agaagatttg 961 gtcccgaaga ctcagctgca tatgccgaca atgtggataa atttcatgcc gagaccattg 1021 ggaaattaca cagcttggcg aaaaccttca tcgatagttt actgtgcaat tggtcactat 1081 tcccgtccac actgcgttgg ctagtgcaaa cgatgtgcca tcaactcaaa caatctcata 1141 atttttccga gagaatcatg aatgaaatca tcaccgatat ggtattcaca catttcatat 1201 gtcccgccat agtgagtccc gacgcgctgg gcatcataga tgcccccatt tcggagcaag 1261 tgcgtttcaa tctcatgcaa attggccaaa ttgttcaaat gctcgcgttg atcaaacatg 1321 atgacatcga tccccgctat gctgaggtct atcgcaagtt tgaatcgaac acggtaacgc 1381 gtttgatcga tttgttgttg gtcacgcaaa caggggaaga tgtggtagcg attttggccc 1441 aacaaagtga ttttgatcga gcacagctga tggccaccca aagagaattg agctatttcg 1501 ctgaattctt tcgcatttta accgctgccg aggagtatgc catacccgag gaggacaaag 1561 agaaattgaa gaaaattatg aaaaatttgc ctgagagtca agggcatcgt catcagaatg 1621 gagaagcaca gcaagctggt gcagctacag aatctccatt taaagaaaaa tccaagccat 1681 cccttataag caaggccacc aaaaccaaat tggccaaaac catgagtttt gctcacaatg 1741 gtggtagtag tcataatgct gaagcggtga atggcttgtt gaatgggaac catgtgccaa 1801 aaagcaatgg attggaagca aatagatcca atcataattc taatcactcc tcacccacta 1861 gatctgtggc cccagagatt gttgacaacg aacccatttt gatatttacc ctctacaata 1921 ggagtgatca aaaattacaa cccctttccg aggaggaagt gctgaagatg aacagcatag 1981 gacaggacat aaacaacagc gacttggtgg acaccgaaaa ctatcaacag gagtctacag 2041 tcgataaatc atcggtggtc aatggttttg atggcatcga tggcatgtca gatgttctac 2101 gtcccttaca caataaaact gccaggtttt cgctttcgca cgatgatgcc tccatagtga 2161 actctgataa tctggaggca gtaagtgagg taccctccaa ccattcggta acaagttctt 2221 tggaactcga agagaatgtg gagaatgata atctatctga tatggtgtcg gccaatgtgt 2281 cgggtcgagg cactcccaat ataagtgggc gtgatacacc ctcgtcccaa gtcaccgatg 2341 gagaatcgct caataatgcg ttgcccacac cccaaatgca aaagttaata tcgaaagccc 2401 gctccgacat agaggataag ttttgtaaat ttgagattaa gaaattcgag ggagacgaaa 2461 ctgtttcgat tatatcagac acctggtcaa cggatgtgct ggccagtgac tccgaaacgg 2521 ttgatgctgt tgaacgagaa agggagcgaa acttttctac accgctgata cccgcggctg 2581 tcatactgcc gggagacaat aattttgatg tacgggcagg ctatttggat gcttcggatc 2641 aacgttcaga gtccaactgg agcactgatg tcttggcttc ggattctgag aagcttaacg 2701 aagtggatac cgatgacaat ataagcatta ctgcaagatc agatacgcag gttagtgtgc 2761 gctcggaaag agagcgagat caattggcag ctgccatatc gtcgggtccc atgaatcgtc 2821 atggtcgctc ttctatacca tcgcaatttc ctcctaccgt tagacgcaat gtgcgagcgt 2881 ttaggccttt ggctgccagc catggaatag ggcctgctaa accaccctct acaggcagtg 2941 tggacgatgt caatgttagc ggcggcagca gtgggggtaa tgcaagtgat cgttcccaag 3001 aagattcagc attttacgat gccatcaatt cttatgatga caattccaat caaatggcca 3061 acaaccctaa tcttcatcat tatagggatg gctcttcgct ggctagaagt tcggtgagaa 3121 ccacaaacca tatgggagca gcggaagaca gttttcaaca gaattacaag agcatagcta 3181 atgagggaga caaagacacc tttctgtcgc caagcacttc ctccgcagcc gcagctcata 3241 tgcatcgcaa tcgcatgaga agacaaacat ctgctgagag tagcatttcg aatcaaagtc 3301 taagtttgga ggagcaggca acgggggcag caaagttgcc acaagcccca gcaatgtcat 3361 catcgtcctc gcgtaaaaaa cgccaccaaa gcaatatcag caatgagtca aaggatttaa 3421 tagacttttc cgatttcgtc gatgataagg atttaacacc gccttcgatg gcaccgccag 3481 atcctcccct tctagaggga ctaccggatg atggcttagt ggaaagacgc aacaccagca 3541 ccttgcaaag aaatgccgga gacgatggca gacgcaatgg cattatggct ttgaagggtg 3601 gccgcgaatc cagtgagcgc ggctccaatt caactcccta ccttcgacga catcaatcgt 3661 taaattatga aaatcatgag attgttttga acaccgtacc cagtcgtgtt tcagccatgc 3721 caaatctatc accaccatcc gatgaaaagc cgtcgtcaca gcaacaagaa caacgccatg 3781 cgtatgagtt gctattgctc tgcggcaaaa cttcagaaat gaatctacaa gacaacgact 3841 taacggataa tgtaaatgag gccgcccgta atactcccac aaatattgtg gtgtcttcta 3901 gcagcataat gatgccatca accagttcca gcaaaccgaa caagtcgacg ggcgccatac 3961 ccaaaagcat aagtttcgat gcttcggctg ataagacaca tggtccttcg acttcgtccg 4021 cctcaacgtc tgcaagacaa caaagatcgg cgataggacg cctgccagat gccacctccc 4081 tacgaaccat tggtactcct aatataaact caaattcaag cattttcaat aaactcaagc 4141 aaggcatttt taagcatcga cgtggtcaca agtcacgtca tctcacatcg aacagcgaag 4201 atatatccca gtgttcacgt agtgtctcat tctccaataa cacatcagag gtttcattgg 4261 atctcttggg tgccaattta ccaggaacca gtagttcggc ggcacaaggt agtggtgtgg 4321 gctactatga tatttcagag gatattttag ccaaataccg aaggaaagtc agtacatcca 4381 gtgaggcaac taattcatca atcggcaatg gtatagcagg agccatgggc ggtggcatag 4441 ccaatgatgt cctgggcaaa gaagatatga gtaataatca acatccctcc atgcatgaca 4501 aaactttgac attcaatatt ataaagaaaa agatacgaac tgtactctct aagactgatt 4561 tgcattcagg cgattttaga cacaccactc atgccaacat ttctccactc cttacatatc 4621 tacagataca attggcccag gcaattaatc ttcaaaattt ccaacaaatt tcttatgttt 4681 ctgaggccat acgttgtatt tcgacactcg atgtggcaca gcacactcaa atcatggccg 4741 agctacaaaa tgatatgcag aaaaggcaaa actatttgca gtatttaatg cgttatcgac 4801 aaaatctatt gatggttatg gaaaatatcg aacaattcga atcgagactg catagtgaga 4861 gtttaacctg caaccgctac ttaatggcag tttgcatgcg aatattcttt gataaaagac 4921 aggatcgatt aagcacgttt caggaagatt ttgcccgtct tacagtgtcc gatgataagg 4981 tggatttaat tgaggaattc ctcgatagcc ttattgaaga gctggtggcc ccagggggta 5041 tactatatgg tatgcccgag tggcaagtca tagagtcacg tttatcgctg gagcgcatac 5101 tactgcaaaa tatgtatcaa caagttatgt ttcccaatga agatgcagat ctgtcgagag 5161 atagtgttct atctgagcat atacgcaagc tacaaaatgt tataacacca tcgcatccgg 5221 ctctacgcat accacaaatg tatttatctg aagccccttg gagttttgcc caacaacagt 5281 tgaaatttat atcggcttat aaaactcccc gagaaaaact gcaatgtgtt gaaagatgta 5341 tatcgagtat cataaatttg ctgcatatgt caagcgctag agtaccagca accgatgacc 5401 ttttgcctgt gctcatttac gttgtaatta tggctaatcc tccttatttg ttatcgactg 5461 tcgaatatat cagttgtttt attggcagca aactagatgg tgaggagcat ttccattgga 5521 cactattcga ttcagtggtg aaattcatta agaccatgga ttattctgag cattaaatga 5581 agtagttatg tgtccagtcg aacgtgtttc attttttcca aatagttgca tattgtttga 5641 acattttttt cttattttat ttaaacacta acagccgtat tcacaagact taattaagcc 5701 ttaaaatagg gtttttcaac tgttctataa agaaaaactc aaataaacct atttcaaatc 5761 tgcatgaagt tttgtgcata ccgctgtcag aacaaaaaac aaaaa