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LOCUS XM_013249083 8495 bp mRNA linear INV 02-SEP-2023 mRNA. ACCESSION XM_013249083 VERSION XM_013249083.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; corrected model. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013249083.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..8495 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8495 /gene="LOC106085054" /note="protein hairless; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:106085054" CDS 2731..7197 /gene="LOC106085054" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:6115..6117,aa:OTHER) /product="LOW QUALITY PROTEIN: protein hairless" /protein_id="XP_013104537.2" /db_xref="GeneID:106085054" /translation="MSADIEITSVLGANGQPLPIHGTGLGSTWSAPVKQERADDAEIQ ELAAKMKEAQKDALAKQQQQAAQMASRQALANGQMQPPVNANGQTNILNYLNRAQKPA NGVVGAANGRSSSTDDKKAPSDEESQKGHFGWTTFGKTYIPYIYRQTEKYCSVRMIEL KLLGKYLNCLHPDIYSSCTCVRSYYITEAEARLFIEINQKHCDGEFGRDFFTQKDLVV RLTDASKFYQFLDICYRKLISGSKSPSEKCGFIRINKESVVPYTVRNGEQVVPLFYFE GETENLKQKADLLSGWDLAYLKFCCKVQGIRNELFSSENVAVISLTDIKSYFPNGTEF EDYWPSKVVDSNLLIGNRSNANNSVNWTRQPSQPPPKVISQSNLQQKQQQHSSAAAAA AAAAHHQQQVMKRGSAGQAMNVYNNTQNILQQQPNAATAQRMHSNALAAQATVQALAN APWMSQQQNNLIHAQMLASQVQQSHAANSRNQYRNPMENLILNNRQPYGAYNNAAISM QPVNSHGQGNAPPPLVRSAGGQNANHMSSVEQTLLQQQQQTQQPRPSNTQQQQQRHIN TSLNPINTVPTSPHTPANSKSAIASNAASSLLANNFNLASSAPTTAQDFNNLALWNQL TPAQRLLLTQQFKNSGGLIPPGVVNKTPFPPLPSLPLDTDLITMLDYNPNKVSKTASS TSGGNNTSNDSSRNNGQFTKPHVPPLIPVNNALDAQRKSNRPPTGVAPPLGGGVSTTV PLNSSAALEDFEKKFKMNDEMRAVVQKVLSNPDLSTFIQTNASNTFVPFISPPISPAN GGVQLPGTSVSIVPNPHVTITPQLPPHFQHSSAAHSPSSSSSSSSSAGGNRQKSVICS TTSAVGGIGGGGHSPSPGRTKSSTNYNYINHPQQQQPLSSSSSSTPTPMEVIDLSSPR RSLQAATAYLQQQQQQQQQQAAVAAAQQQNQQQQRLAAAAAAAQHHQQNGRQSSNSSA QQQANSASLHLQRHAANVAAAAVDNSQRLNIIPEIPANNINAQPYKVQKVYVESHLVP CINMKAYNDSEQLMTLTDFQKYFFPSVPLDQCKRLIEALGVELYKGNRHQLKVLMQHD GQHNENIPLVQVRDILKYMTQLTFMIRNQEQPPNKRSRISXELGWGGQHTTTAAATTA ASASSAQEHNHHHKQHQQQQQHQQQHQKESRNHLANMVENSSMSMSSSSNGNTSNRSN STASSTAQKSGMSTASSASSSLPSSAVAPPAHNPHQHALDMFMLYSPLSSSAAASSTH AAAAARQQLLLQQFHQHQQQILQQQHQQQQQHQPQQHHMEKSNQSKHGTSSSKSSGGS GSSSSSQRLSAAQQLATDFLSMFTAGHHAAAAVAGNTPGPIMDSSSASHQRSSSNASA SSLASTSSTATTGNKSSNFSVASLTSSSTNNSSAATGASSSAVGTGAQTAAAAASAAL YGVAAPFSAPALVNPYPPHLPGAHGLPSPTIYPPTPPPSAPWIHPWYAGDTF" ORIGIN 1 ccagaatagt acgcatgttg gacaaaagaa taacggaaat atccaaagac agtaatgtgt 61 gtgtatcaaa gcgtttgttc ttttggatag acctggaaat ttttagacaa actacttttg 121 cagtatagtg gttgtgaaaa tcctgcaatt ctgggcaaca tgatgtgagt gattgaaaac 181 atttgtgttc cctaacctgc agctcagtga gatcttcaaa tagaaaaact ttaaaacatt 241 gacgacaagc cacaaatcct tttatggctt gtccatctcc attacacagc caaccaagtt 301 tggaccacag cgactgcgat gaagagggtt tcgtctccaa ctcgtagacc ccggtgcatt 361 cattttctta atcaactgat ctacagtgtc ttgtgctata tggcttatat gtatgtatgc 421 tgtgtcacaa actatgtgca tgctctgacc aaggctaata taaagagcta tgctggaacc 481 cgttttctat gtaaatcaac atcatcttta acaaatgaaa cacccacaca agcgatgtgc 541 aacagcggat ctccccgccc ctacaaagcc atgctacatg catgatgggg tccatccacc 601 caccggttca tgtgcatgcg agtaatctag ctaacatcat ctgtagtgta aatcgggttt 661 ctattgcaat ttacaaagac aaatcacaat tttaaagcct ggctgatgta gagcctatcc 721 aacattttca tttttaagtg caaaaataca acgccagcaa caacaacaac agcagcgcta 781 aaagtgaagg aaaaaacaca taaaaactcg tatgtacccc tgaacaaaca tacatatatt 841 tttaaataca tatcgacatc tatatgaatg tagtgtgtat gtatccatac tcaaatgcca 901 agagaaacgt taaaccaaaa tacaaaagaa gaaaaaaaaa aacaacagcc gtcaatgtac 961 atttatagca caaaaccgac gatacaaaaa tctgctgcta tacgaagcgg ggcctgtcgt 1021 tgtcatgaac atttcaatga atgagactag cgccacgacg aaagcaataa aacggcagca 1081 agcagcaact gaggaaaata cttcaaaaag tgtgtgtttt ttttgcttta cttggcacac 1141 acaggcaaaa gcaacaacag aagcaaagtc tcgtgagtgt cgttttcaac gaaaactcaa 1201 catcgtgttg tggttcggca ataccatcgt agtcattgtt atcgtcgtcg tcgtcgccgc 1261 cgtcatcatc atcgttcaca gaggagggaa tacacacaga ttggaaagat agagggacac 1321 gccactgaca gacagacgaa cgaatgggcg ggcggacgtt tggtgggttt cagaagaaac 1381 acaaaacaat aacaacaaga acttagtttg cacgaaactg aaacgatgtc gtagctcaac 1441 tgctgctaca gcgttctctg cgttgctttt gttgttgccg ttgccacttt ggcctggtgt 1501 ataaacggat aagtatgggt ctggctctgc taagtaagag tgggtatgtg tgcgtgtgta 1561 tatatataca tatatatact aggggggtac atgggttata ttttcgctgc ttattgcctc 1621 tgccggttgc atgtttgggc ttgtatgaat ttcagcagaa acaacgatca cactcgtata 1681 ctgactttga acggtgaatg tgtacgttgg tacggttaat agagattgcc cccaagaaga 1741 agcggcgacg cgcgaaacct tattatattt tgtacacacc acaaaacaaa taagaaaaaa 1801 aattaataaa ttttcccata ttcgaaaaag gaaaaacata acaaagcgcg gcgtgaaaat 1861 ttatttacca actaatcatt gctacaaaat accattaaac catgaataat ttaaaaacaa 1921 aaagtgaaaa atatattcat atggttttaa atgaataaaa aaaagaaaaa aaataaatat 1981 gtatgctaat ttgaagtaat ataccttttg ttaaacaaaa aaaggtgcca attagaagca 2041 ttcgcccact tgctagtgaa aaagggataa aaaattccct tcttacaact ctgtgtgtta 2101 aaataattaa agttcatgca ccaacaacaa ctctaacgtc aataatagca gtgtaaaaaa 2161 aaagaaaaac gttggttggc tggctgtaag aaaaggcttc agtgtatatc agctaatgtg 2221 tgtgcgtgcg tgcgtgtgtg tgcgccttaa tgtgtattgc atacactcag cacatcgaaa 2281 ggaagaagaa gcagcagcca agcatacgta caacaactaa aacaaaatgc agttactggt 2341 tacttgaaat tattttgaca aagaaagagc attaccaaaa tcatacaaga gtaaaagaga 2401 gcgcgggagc tccccaagtg tgaaagtata tgtaaaagta aaaaataaat tcaaaagcaa 2461 aaaagattta caagaaattg aataaaaata attaagaata ttaaaacaaa acaaacataa 2521 attcaaaatc aacatttctg tgtttgtgca atttagccca acctcccctt aaaaaatgct 2581 caggcctctg cagtgtttac cctgaaattg gataagcaaa aaaaatcaac atcaaaaaca 2641 agaataatta gttttcattt ttcacactgc cgcctgccct tctcatcatc atacatcctt 2701 attacttaat acaacaaaca ttaacacata atgtctgccg acattgaaat caccagtgtt 2761 ttgggtgcca atggccaacc actgcccata catggcaccg gcttgggttc cacctggtcg 2821 gctcccgtta aacaggaacg tgccgatgat gctgaaattc aagagttggc cgccaaaatg 2881 aaagaagccc aaaaagatgc tttagccaaa caacaacaac aggctgctca gatggcctcg 2941 cgtcaggcct tggccaatgg tcaaatgcaa ccgcccgtca atgccaatgg ccaaacgaat 3001 attctcaatt acctaaatcg tgcacaaaaa cccgcaaatg gtgtagtggg ggcggccaat 3061 ggtcgctcat ccagcactga cgataagaaa gcccccagcg acgaagaatc ccaaaagggg 3121 cattttggtt ggactacttt tggcaaaacc tatataccct atatctatag gcaaacagag 3181 aaatactgtt cggttcgcat gatcgaattg aaattgctgg gcaaatatct taattgtctg 3241 catccggaca tctattccag ttgcacgtgt gtgcgttcct attacattac cgaagccgag 3301 gcccgccttt ttattgaaat aaatcaaaag cattgtgatg gagaattcgg acgagatttt 3361 ttcacccaaa aggatttagt tgttcgccta acggatgcct caaagttcta ccaattcctg 3421 gatatatgtt atcgtaaact tatctcgggc agcaaatcgc cctcagagaa atgtgggttt 3481 atacgcatta acaaagaatc ggtggttcca tatacagtgc gcaatggcga acaggttgtg 3541 cctctcttct atttcgaggg cgaaaccgaa aatctcaaac aaaaggctga tctgttgtcc 3601 ggttgggatt tggcctattt gaaattctgt tgcaaagtgc aaggcatacg caatgagttg 3661 ttttccagtg agaatgtggc ggtcatcagt ctaaccgaca tcaaaagcta ttttcccaat 3721 ggcactgaat ttgaggatta ttggcccagc aaagtcgtag actcaaatct gctaataggc 3781 aatcgttcga atgcaaataa ttcagttaat tggacacggc agccttcaca gcctccaccc 3841 aaagttattt cccaatcgaa cctgcaacaa aagcaacagc aacattcctc ggcagcagca 3901 gcggcggctg cagctgctca tcatcaacaa caagtcatga aaaggggctc ggctggccaa 3961 gcgatgaacg tttataacaa tactcaaaat attttgcaac aacagccaaa tgcagcaaca 4021 gcccaacgaa tgcattcgaa tgccttggcg gcacaagcca cagtacaggc tttagcaaat 4081 gctccttgga tgtcacaaca gcaaaacaat cttatacatg ctcaaatgtt agcttcacag 4141 gtccaacaat cacatgcagc caattcccgc aatcaatatc gtaatcccat ggagaatctc 4201 atactgaaca atcgccagcc ttatggagcc tacaataatg cagccatatc aatgcaacct 4261 gttaattcgc atggtcaagg caatgctcct ccacccctgg tgcgatcagc aggcgggcaa 4321 aatgccaatc atatgtctag tgtcgagcaa acgttgctgc aacaacaaca acaaacacaa 4381 caaccgagac cctctaatac acaacaacaa caacaaagac atataaacac ctcccttaat 4441 cccataaata cagtacctac ttcaccccat acccctgcga acagtaaatc ggcgattgcc 4501 tccaatgctg cctcctcctt attggccaat aatttcaatt tggcctcctc ggcccccacc 4561 actgcccaag actttaataa cctagcctta tggaatcaat tgactccagc ccaacggtta 4621 ttattgacgc aacaatttaa gaattccggt ggtcttatac ctccgggtgt tgtcaataag 4681 acacctttcc ctccattgcc ttcgttgccc ttagatacgg atctaattac catgttggac 4741 tataatccaa ataaagtatc aaaaactgca tcgagcacaa gtggcggcaa taacacctcc 4801 aatgatagtt cgagaaacaa tggccaattt actaagcctc atgtgcctcc tctgataccg 4861 gttaataatg ccttagatgc acaacgtaaa tcaaaccgtc cccctactgg tgtggcgccc 4921 ccacttggtg gtggcgtctc caccacagtg cctttaaatt catccgccgc cctggaagat 4981 ttcgagaaga aattcaaaat gaatgatgaa atgagagctg tggttcagaa agttctttcg 5041 aatcctgatc tgtccacttt tatacaaaca aatgcttcca atacctttgt gccttttata 5101 tcgccgccca tatcgccagc gaatgggggt gttcagttgc cgggcacttc ggtgtccatt 5161 gtgcctaatc cccatgttac gataacccct cagctcccgc cccattttca acacagtagt 5221 gcggcgcatt cgccgtcctc ctcatcgtct tcctcctcat cggctggagg caatagacaa 5281 aagagtgtca tatgctcgac gacaagtgca gtggggggga taggtggagg ggggcattcg 5341 ccttcgccgg gacgtacgaa atcctcgacc aattacaatt acatcaacca cccccaacaa 5401 caacaaccac tttcttcctc ttcttcttct acacccacac caatggaagt aatcgattta 5461 tcttcccccc gaaggtctct acaagcggcc acagcctact tgcaacaaca acagcagcaa 5521 cagcaacaac aggcagccgt ggcggcagca caacaacaaa atcagcagca acagaggtta 5581 gcagcggcag ccgctgcagc tcaacatcac cagcaaaacg gccgccagtc gtcaaattca 5641 tccgcccaac aacaagctaa ctcggccagt ttgcatctgc aacggcatgc ggcaaacgtg 5701 gctgcagcgg ccgttgacaa ctcgcaacgt ttgaatatta taccggaaat acccgccaac 5761 aatatcaatg cccagccgta taaagttcaa aaggtctatg tggagagtca cctggtgccg 5821 tgtatcaata tgaaggccta caacgattcc gaacagctaa tgacactgac agacttccaa 5881 aaatatttct tccctagtgt gccgctggat cagtgtaagc gattgataga agccttggga 5941 gttgagctgt acaaaggaaa tagacatcaa ctaaaggttc ttatgcagca tgatggacaa 6001 cataatgaaa atataccttt ggttcaggtg cgcgacattt tgaagtacat gacccagcta 6061 acgtttatga taagaaatca ggaacagccc ccaaataaac gttcacgtat aagctaggaa 6121 ttgggttggg gaggacaaca tacaacaaca gcagcagcaa caacagcagc atctgcatcg 6181 tcagcacagg aacataacca tcatcacaaa caacatcagc agcaacaaca acaccaacag 6241 caacaccaaa aagaatcccg taaccattta gccaatatgg tggagaattc gtcaatgtca 6301 atgtcttctt catcaaatgg caacaccagc aacagatcca attcgacagc ctcctctaca 6361 gcacagaaat ctgggatgtc gacggcttct tctgcgtcgt cgtcattgcc atcatcagct 6421 gtagcaccgc cagcccataa tcctcatcaa catgcgcttg atatgtttat gttgtactcc 6481 ccattgtcgt cctccgcggc agcatcatca acacatgccg cggcagccgc acgacaacaa 6541 ctacttctgc aacaattcca ccagcatcag caacaaatct tacagcagca gcaccaacaa 6601 cagcaacaac accaaccaca acagcatcac atggaaaaat ccaatcaaag taaacatgga 6661 acttcttcat cgaaatcaag tggtggtagt ggtagcagca gctcatctca aaggctatct 6721 gcagctcaac agctggccac agatttcctt tctatgttta cggcaggcca tcatgcggct 6781 gcggccgtgg caggtaatac accaggtccg attatggatt cttcttcggc cagccatcaa 6841 agatcttcgt ccaatgcgtc tgcttcatca ctcgcttcaa catcgtccac agccacaaca 6901 ggcaataaat cttccaactt ttcggtggct tctctgacat catcatctac taacaattcc 6961 tcagcggcaa caggtgcctc ctcatcggcg gttggcactg gtgcacaaac agctgcagcc 7021 gcagcatcgg ctgccctata tggcgtggct gcaccctttt ctgcacccgc tttggtcaat 7081 ccctatccac cgcatttgcc aggtgctcat ggactgccct cgcctaccat atatccgcct 7141 acaccgccac cctcggcgcc gtggatacat ccttggtatg ctggagatac attttaaaag 7201 tagaacactt ttaaagtgta agaagatatg gcggtttcgc atacaattcc atattttcca 7261 taattgtatt gaagatttct ttcggtaagg attaaaacct aaatattgag aagttccaaa 7321 aagataaaat tcccattcag attcgaagtt gttaagtatg tatattccct cccatctatc 7381 cagacacaca caccactggt caggtcacca ttaaatgaac caaagaaata tatttctctg 7441 tttttaaggt ttgttttgaa agaaaaaagt tttaagtgcc aaagtctttt aagcattttg 7501 aaaggtacag aggaaacaac ttgagaaaag tcttgtttta agaaattcaa ttgtgaaatt 7561 gtctgccaga ccatatttca agcttcacat acataaataa ttcttgagga attgtatatt 7621 taaagcaatg gtgggcaaat acgcacacac acatacttgc gatttgtatt ttatgtacac 7681 aagcacataa gcctgcttac ttgtaaatag taatgtacaa atgtttgagt atcctcttcg 7741 ctggtttaaa gtagtcaact ttccttgtat atatactaaa aaacactcat tgaagccact 7801 tcttcattac acatgtaacg cttaagtgaa acaagaatcc cctttacatg ggatatcata 7861 cattcgcata ttgttgcaat ataaaattac cagtttatac ttttcacatt tttataattc 7921 tatatcaaaa tttttcatgc gatataataa gtctgttcgt gtactcaaaa ctttctgtaa 7981 atttgcacaa attgttactg gaagtcgttc gcgtacttta tttgccagta gaagagagcg 8041 ggagagtgcg tgagagagac caacattttc agagcgtggt aattgagagc ttgcaaattt 8101 ccactggagt ttttttccta tcagaaattt gcggcatcaa actgctgttt tatgaaaacc 8161 cgctgttaaa ttctaataaa tagccaaaga gattagaagc cgtttcctga aattttttac 8221 tggcacattt ttgactggaa aagtacgcga acagacctaa tgtaagcgaa cattataagt 8281 tgataaatac aaatcagctg tgtatttatc aaactataat gacagaccaa agaaattgcc 8341 atcaattaaa gcagagtatt ccaaaaaaaa ttggcatgta tataaattgg gtacatagta 8401 aatattctaa aaaatatgtt ctgtatatat aacatataac aaaacatcct aaacaccaaa 8461 gaatgtaggt accaacatat cttccaaatt tacaa