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PREDICTED: Stomoxys calcitrans tRNA


LOCUS       XM_013249035            1340 bp    mRNA    linear   INV 02-SEP-2023
            (guanine-N(7)-)-methyltransferase non-catalytic subunit wuho
            (LOC106085036), mRNA.
ACCESSION   XM_013249035
VERSION     XM_013249035.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013249035.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1340
                     /gene="LOC106085036"
                     /note="tRNA (guanine-N(7)-)-methyltransferase
                     non-catalytic subunit wuho; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:106085036"
     CDS             90..1214
                     /gene="LOC106085036"
                     /codon_start=1
                     /product="tRNA (guanine-N(7)-)-methyltransferase
                     non-catalytic subunit wuho"
                     /protein_id="XP_013104489.2"
                     /db_xref="GeneID:106085036"
                     /translation="MTTIFYVDPELVIALNKKVIFVNPNDLQIFKEILLPEDLTKCGL
                     TEGAGEDQDQDDEKTKQNKTKEMPTIQHVKMSPNRQLLALTTAGQKAVLLYTLRPEHA
                     KLVSVRGLARASSALTFSKDSKRLLVSDKTGDCYEYSCEDYVAAPKLLLGHLSIVYDI
                     LWSPAEKYIITCDRDDKIRVTNYPQTVDIHTYCLGHKEFVAAMELLNENVLMSISGDK
                     TLKLWDFEKGEELRSINLPAPGIKMTVKTKAPGKYEVSVLLHQPNECVVQYEISHDQE
                     GVWSFSSGDVLSFPDVICCGLTYAEERLYVVGVVDDHLTLRLTANSPAAPENWLNMVE
                     EQFKELTWTPEDISSWFKKKFDNVSEYLERKKRRIEEKQK"
     polyA_site      1340
                     /gene="LOC106085036"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtactctgtg cttgtgatgt cagccgctgc caactgcaac gtgatttcat tatttttgtt
       61 tatctttcgc ggcctctgaa agttccaaaa tgacgactat tttctatgtg gatccagaat
      121 tagtcattgc cctaaataag aaagtaatct ttgtaaatcc taatgatttg caaattttta
      181 aggaaattct tctgcccgag gacttgacga aatgcggttt aacagaaggc gctggcgagg
      241 atcaagatca ggatgacgag aagaccaagc aaaataaaac taaggaaatg cccaccatac
      301 aacatgtgaa aatgtcacca aatcgccaat tactggcgtt gaccacagct ggtcaaaaag
      361 cagtactgct gtataccttg agacctgagc atgcgaaatt agtaagtgtg agaggtttgg
      421 caagggcttc cagtgcttta acatttagca aggattccaa acgtttattg gtaagcgata
      481 aaactggtga ttgctatgaa tacagttgtg aggactatgt ggcggcaccc aagttacttt
      541 tgggccattt gagtattgtc tatgacattt tgtggtcccc agctgaaaag tacataataa
      601 cttgtgatag agatgataaa atacgagtta ccaactatcc ccaaactgtt gacatacaca
      661 cctactgttt gggtcataag gagtttgtgg ctgccatgga gttgctgaat gaaaatgttc
      721 taatgtctat atccggtgat aaaactttaa aattatggga ctttgagaaa ggtgaagaac
      781 tgcgaagcat aaatttacct gcaccgggta tcaagatgac ggttaaaacg aaagcaccag
      841 ggaagtacga agtatctgta ctcttacatc aacccaacga atgtgtcgtg caatatgaga
      901 taagccatga tcaggaaggt gtatggagtt tctcatccgg agatgtacta agttttcctg
      961 atgtcatctg ttgtggcctc acatatgccg aagaacgtct gtatgttgtg ggagttgtag
     1021 atgatcattt gaccctaagg cttactgcaa atagtccagc tgccccagaa aattggctga
     1081 atatggttga agaacagttt aaagaattaa cttggacacc agaggatatt tcttcatggt
     1141 ttaaaaagaa attcgataat gtcagcgagt atttggagcg caagaaaaga cgcatcgaag
     1201 aaaaacaaaa gtgagaacat tgaagggaac attttgaata ttaatattaa ttataagaaa
     1261 aagcgatttt atataattgt tttctttttt ttttaatttt taatgtgtaa aaataataaa
     1321 tgaggcattt taaatttaaa