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PREDICTED: Stomoxys calcitrans


LOCUS       XM_013248955            1052 bp    mRNA    linear   INV 02-SEP-2023
            2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
            (LOC106084956), transcript variant X1, mRNA.
ACCESSION   XM_013248955
VERSION     XM_013248955.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013248955.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1052
                     /gene="LOC106084956"
                     /note="2-methoxy-6-polyprenyl-1,4-benzoquinol methylase,
                     mitochondrial; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 8 Proteins"
                     /db_xref="GeneID:106084956"
     CDS             101..997
                     /gene="LOC106084956"
                     /codon_start=1
                     /product="2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase, mitochondrial"
                     /protein_id="XP_013104409.1"
                     /db_xref="GeneID:106084956"
                     /translation="MNVSRNLLASLKLIKSHYPCGYRLFLIRNNQTSHATTSEEGTTH
                     FGFQTVKESEKEQKVHKVFEDVAKSYDIMNDAMSMGIHRVWKDIFIERLGPQHGTRHL
                     DMAGGTGDISFRFLKYLQGQPNPKGLKSHVTVSDINQHMLDVGEERAKKLGLTEEKLS
                     NMTIEWKVADAEKLPFEDNSYNSYTIAFGIRNCTHVDQVLREAYRVLQPGGRFMCLEF
                     SHLNSQTMQWLYDQYSFNVIPPMGQILAGQWQPYQYLVESIRKFPKQEDFKEMIQEAG
                     FDLVRYENLTFGVVSIHSGFKL"
     misc_feature    239..994
                     /gene="LOC106084956"
                     /note="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE; Region: ubiE; PRK00216"
                     /db_xref="CDD:234689"
     misc_feature    order(410..430,506..511,605..613,668..670)
                     /gene="LOC106084956"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]; other site"
                     /db_xref="CDD:100107"
     polyA_site      1052
                     /gene="LOC106084956"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttgataaact tctgaattaa aaaatacggt ttataaataa aaattgcaaa ttttagttaa
       61 atgaagtaat accgtttata tcataaacct gaagagcaaa atgaatgtgt cacggaatct
      121 tcttgcttcc ttaaaactaa ttaaaagtca ctacccttgt ggatatcgtt tgttccttat
      181 acgaaataat caaacctctc atgccacaac tagcgaagag ggcaccaccc attttgggtt
      241 tcaaacagtg aaggagagtg aaaaggaaca aaaggtccat aaagtctttg aagatgtggc
      301 caagtcatat gatataatga atgatgccat gtccatggga atacatcgtg tatggaagga
      361 tattttcatt gaacgcctgg gaccacagca cggtactcga catttagaca tggcaggtgg
      421 caccggggat atatctttta gatttttaaa gtatctacaa ggacaaccaa atcccaaggg
      481 acttaaaagc catgtgacag tatccgatat aaaccaacac atgttagatg tgggtgaaga
      541 aagggccaaa aaacttggac tgaccgagga aaaactatcc aatatgacaa ttgaatggaa
      601 agttgctgat gccgaaaaac taccttttga agataattca tataattcct acaccattgc
      661 cttcggtatt aggaattgta cccatgtaga ccaggtactt cgtgaggctt atcgtgtttt
      721 gcaacctggt ggacgtttca tgtgccttga attcagccat ttaaatagtc aaacaatgca
      781 atggttgtac gatcaatatt cctttaatgt tattccccct atgggccaaa ttttagcagg
      841 tcagtggcag ccttatcaat atttggtaga aagtatacga aaatttccca aacaagagga
      901 ttttaaggag atgattcaag aggctggctt tgatttggtg cgctacgaaa acctaacttt
      961 tggagttgtt agcatacatt ctggttttaa gttataacaa atagaaagtg ttataaatat
     1021 catattataa taaacaagga aatggaaaat ta