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LOCUS XM_013248537 6040 bp mRNA linear INV 02-SEP-2023 transcription subunit 12 (LOC106084669), transcript variant X1, mRNA. ACCESSION XM_013248537 VERSION XM_013248537.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248537.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6040 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6040 /gene="LOC106084669" /note="mediator of RNA polymerase II transcription subunit 12; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106084669" CDS 929..5905 /gene="LOC106084669" /codon_start=1 /product="mediator of RNA polymerase II transcription subunit 12 isoform X1" /protein_id="XP_013103991.2" /db_xref="GeneID:106084669" /translation="MATLASEMPPLHTAEALAGVQTPANASQPPPTAVASVGVGGGTN TGAGSGGGGDPSDPSEVANSGPQAPTTASNSNNTISAAADSSDNQPSTPQPTHHSNGS AVSDMQNHHHQQQHSSSAGASHHPYANHHMYASQQQPSTTTASSSAASSTHMQQMYPH NIYASANMDMQQQPQTPSQHSGYPSYLNSYEQFYQQQQQQQHPSSQNPQMDYINSNSN SQSSMYPSANDYKQQAAGVRYHPYLHTPTSGLPSSAGPQQNSNSNNALDAVNSQSAPV VSSASSSVMSPRVVSSTSPSSSSNQMQMSGSASSIGSMSAGNPSSPASGGSNGAPQCK KCGIMCTNDSELQEHIANVHGASPYASSGYASSPYIKEELQQQQTPPSQNQQQQSAQQ STGGGTGGGGNPGEILDLDSQKMLYPPGGQGLMPGGMMHPSVGVTDPLQSMHSMQQRA GMASWDQQSTEGLPPYLQQNSNDGKSMPNHSPYYPSAKESPYHVSNSSNVIKSEYPMI KSEYPGGDTQQYMGDKSFDPTAPGQQQMMPPAVSSSPAEFPSTTTGGPQDTGNSQQGN GQFRGANFEPPSSSSALSTNLGTKAANWKSNEARRPKTYNCTACNKWFTSSGHLKRHY NTTLHKNAVKSSGQPDPATLPISAHHHPAREPTAKTSRRGGGAAAAAAAAAANAAALQ QPPNPVIPPEPPNSPQDYGGPQTAAGGLTPMSHYAATPSPNSMYHQQQQQQQYQQYMP QVQSTTNASPQHASNMAGAQQPSSLHAPQTVMNGHPNALAGPSVPMTQTMPMPSSQMR GLLNNNNTTTTTLIIKNEHMEAAMEDPDLQDQDLEEDEALEEEEVEEPAGVVGHMDPQ QQPLQHRRLLLLPKEEYVKEELEHSMHSAMEGADQEAVEAADREAPAHNVALHHMQSQ HQLHYQLEQQQADMERLYHNTTPSSTHSNMQVHSPLIISHQQYREQLELEQQIVAQGT YTLTPTPPPLQQQQLHHNIMEPQPYISMPLAINTQQHSSMLQLQQQHITTEQQQPQPD TTIPTSMANMLPPSHLMPPQQQPTELQPLASTQLQPQQQLDTINTNTQHMLQSHITTS SITNIPSYHQLQQPGSVLQQLDHTLTYPHTIIGNNNSAGGPLSMANAEILTLDAYGNL VSASATHQQLIQTADGQLVQLIPANSATGGGATTLYSQSVYNPYIAQRSPQEGDLPPI SHQYQEQTTTLTVVAPSMAYSPSITSSSNSMDHKPFKYSMTEDYLNNNYSNHTAISEH QDVILQQTKLESDESQDMQQQQLQQQQQQLEKEEAQARKKPEVSTATKRKRNPSSSSS TGAAAPPVTMLPSGRIKCIPCGKEFTKICYLTQHNKSFHSGEYPFRCQKCGKRYQSED VYITHLGKHKTTDKAHKCDMCPKQFHHKTDLRRHIEAIHTGNKQHSCDICEKSFCRKD HLRKHLETHSRPRMVSKKSRNATNSAATTTTTSGGAATATTTTGGIRSIAKAFAKIEK KSKDSPLLLNAPTASCASPPPAMQSSLAAGNAAMHAGGKRQQQQQQAKHLLNIKCENS CSPSASPVSMQNHHLADDVAVDDDELLDEDDYDLDEEEYISIEQYEQEIHQRQQQQQR ELQQQEQQQQSLQQQLMENGGQFALGKQQQHQQQQQAYQIIEQEIPSY" ORIGIN 1 gttggcattt tgacgaagct ttaagcgccc acttcttttt tacaactttt tttagttttt 61 tcctttaaaa aaccaaaaac acactttcgg cataaaattt ttggctaccc gacaatctca 121 aaaaaaaaga acaactaaaa acaaaaaaat ttggacatat ttaatcaaaa cttttaattt 181 gttttaagtt cgaagaagaa aaaattttta ttttatttta aaccaaaaaa aaaacgcaaa 241 aaatttttaa gttagatttt tagtttcaaa cgcgtagaaa gagcagtgca aaaatctcaa 301 aattcaaaat tcgttacaat ttttagttgc tttcatttat aaaatcttga gttgacaaat 361 ttttatttta aacaaaacaa aaaaaaaaac gccaaaacaa aaaagtttaa aataacaaaa 421 accacaaaaa attgacgcgc cggtttaaaa acaccccagt gtaaataaag cggttatgga 481 taattaaaca aaacaaacgc aaatgatgcg accgtaacaa agatacaaaa tcttccctaa 541 agaaaatcaa aacgattcgt aaccgtaact ctctcaacga tcaaagcaac aacaacaaca 601 accaaagtac actcaaattt taacactcgc aaaaacaaaa actcaaaggc tctcaaatac 661 agcaaacgat caacaaaaat tgcggccggc tttggcctag ctcgctcact ggcttgctcg 721 atcacattca ctaggggcgc tctctttggc ccagcagcat aattacacat tcaaggcttg 781 gttttatata gcaaacacat cgaaagcaag caacccctac aaattctcta tacagcatca 841 tcttcatctg cttttgatca acgttcatcc tgttcattag ttgaatgcgg ccatttcaag 901 gataaaatca taccgaatgt agcagcatat ggcgacattg gctagcgaaa tgccgccgtt 961 acatacggcg gaagccttgg ccggggtgca gactccggcc aacgcttcgc aaccaccgcc 1021 tacggctgtg gctagcgtag gcgttggtgg cggtacaaat acgggtgcag gcagtggtgg 1081 tggtggcgat ccctcggatc cctctgaggt ggccaattct ggcccacagg cccctacgac 1141 ggccagcaat agcaataata ccatatcggc agctgccgac tccagtgata atcagccctc 1201 tacaccccag ccgacgcatc acagcaatgg ttcggcggtc agcgatatgc aaaatcatca 1261 tcatcagcag cagcattctt catcagcggg cgcctcccat catccctatg ctaatcatca 1321 tatgtatgct tcacaacaac agccctctac gaccaccgct tcttcttcgg ctgcctcttc 1381 aacgcacatg cagcaaatgt atccccacaa catatatgct tccgccaata tggatatgca 1441 acagcagcct caaactccct ctcaacattc cggctatcct tcctatctca actcctacga 1501 gcaattctat cagcaacaac aacagcagca acatccctct tcacaaaatc cccaaatgga 1561 ttacatcaat tcgaattcga actcacagtc gagcatgtat ccttcggcca atgattataa 1621 acagcaggcg gcaggggtac gctatcatcc ttatttgcat acacccacct caggtttgcc 1681 ctcctcggcg ggcccacaac aaaactccaa ttccaataat gcgctggacg cggttaattc 1741 acaatcagcg ccggtggtct cctcggccag ttcaagtgtc atgagtcctc gtgtggtcag 1801 ctccacaagt ccctcctcgt ccagcaatca aatgcagatg agtggcagtg ccagcagcat 1861 aggcagcatg agcgctggca atcccagctc accggccagc ggtggcagca atggggcccc 1921 acaatgcaaa aagtgtggca ttatgtgcac caatgactcg gaactgcagg agcacatagc 1981 caatgtgcat ggggcttcgc cttatgccag cagtggctat gcaagttcgc cctacatcaa 2041 agaagaattg cagcaacaac aaacacctcc ctcgcaaaac caacagcagc agtcagcgca 2101 acaaagcact ggtggtggca cgggcggcgg cggtaatcca ggtgagattt tagacttgga 2161 ttcccagaaa atgttgtatc ctcccggtgg tcaaggtcta atgcccggcg gcatgatgca 2221 tccctccgta ggtgtaaccg atcctttgca atccatgcac agcatgcaac aaagagccgg 2281 tatggcttcc tgggaccaac agtcgacaga aggtttaccc ccctacttgc aacagaactc 2341 gaatgatggc aaaagcatgc ccaaccattc gccctactat ccctcggcca aggagtctcc 2401 ctatcatgtt tcgaatagtt caaatgttat caaatcggaa tatcccatga tcaaaagtga 2461 atatcccggc ggtgatacgc agcaatatat gggtgataag tcctttgatc ccactgctcc 2521 cggccaacag caaatgatgc cgccggcagt ctcctctagt ccggcggagt ttccatcgac 2581 caccacgggt ggacctcaag atacgggcaa ttcgcaacag ggcaatggac aatttcgcgg 2641 agccaatttt gagccgccct cctcgagttc ggctctatcc acaaacctcg gcaccaaggc 2701 ggccaattgg aaatcgaatg aggcccgtcg gcccaagacc tacaattgta cggcttgcaa 2761 taaatggttc accagctcag gtcacctgaa acggcactac aacacaacgc tgcataaaaa 2821 tgccgtgaag tccagtggtc aaccggatcc tgccacctta cccatatcgg cccatcatca 2881 tcccgccaga gagcccacgg caaagactag cagacgtggt ggtggtgcag cagcagcagc 2941 tgccgcagcc gcggcaaatg cagctgcttt gcaacagcct ccgaatcctg tcatacctcc 3001 cgagccgccg aatagtccgc aggattatgg cgggccccag acggcagctg gtggcttgac 3061 gccaatgtcc cactatgctg ccactccctc gcccaacagc atgtaccacc agcagcaaca 3121 acagcagcag taccaacagt acatgccaca agttcaatca acgacaaacg cttcaccaca 3181 gcatgcttcc aacatggctg gcgcccagca gcccagctct ctacacgccc cacaaaccgt 3241 tatgaacggt cacccaaacg cgttagcagg cccctccgtc ccaatgacac aaacaatgcc 3301 aatgccgtcc tcccaaatga ggggcctgct gaacaacaac aacaccacaa caacaacgct 3361 tatcataaag aacgagcaca tggaggcggc aatggaagat ccggatcttc aggatcagga 3421 tctggaagag gacgaggcac tggaggagga ggaggtggag gagccggcgg gagtagtggg 3481 acacatggac ccacagcagc agccactgca gcatcggcgg ctgctgctct tgccgaagga 3541 ggaatatgtg aaggaggaat tggagcacag catgcactca gcaatggaag gggcggacca 3601 ggaagcagtg gaggcggcgg accgggaagc gccggctcac aatgtggcac tccaccacat 3661 gcaatcacag catcaattgc actatcagct ggagcagcag caggcggaca tggagcgtct 3721 ctatcacaac accacgccca gcagcactca cagcaacatg caagtccact cgccccttat 3781 tatctcccac cagcaatacc gggagcaact ggagctggag cagcaaatag tggcgcaggg 3841 cacctatacc ctcacgccaa ccccgccgcc gctgcagcag cagcagcttc atcacaatat 3901 aatggaacca cagccttaca tcagcatgcc tttggctatc aacacgcagc agcacagcag 3961 tatgctgcag ctgcagcagc agcacatcac cacggagcag cagcagccgc agccggatac 4021 taccatcccc accagtatgg ccaatatgct gccccccagc cacctcatgc cgccgcagca 4081 gcagcctacg gagctgcagc cgctagccag tactcagttg cagccgcagc agcagctgga 4141 cacaatcaat accaataccc agcacatgct gcagtcgcac atcaccacca gcagcatcac 4201 caacattcca tcgtaccacc aactgcaaca gccgggctcg gtactgcaac agctggacca 4261 cacgctgacc tatcctcaca ctattattgg taataacaac agtgcaggcg gcccactatc 4321 catggcgaat gccgaaattc tcaccctgga tgcctatggc aacttggtct ccgcctcggc 4381 aacacatcag cagctgatac aaacagccga cggtcaattg gtgcaattga taccggcaaa 4441 ctccgccacg ggtggtgggg ctacaacact ctatagccaa tcggtgtata atccatatat 4501 tgctcaacgc tcgccgcaag aaggggatct gccaccgatt tctcatcaat atcaagagca 4561 gaccaccacc ttgactgtgg tggcaccttc gatggcctat tcgccaagca taacctcatc 4621 gtccaattca atggaccaca aaccgttcaa gtattctatg actgaggatt atctcaacaa 4681 taactacagc aaccacacag caatttcgga acaccaagat gtgatactac aacaaaccaa 4741 gctggaatcc gatgagagtc aggatatgca gcagcagcag ctacaacaac agcagcagca 4801 gctagagaaa gaagaggcac aagctcgcaa gaaacccgaa gtcagcacgg ccaccaagcg 4861 taaacgcaat cccagctcct cttccagcac cggcgctgca gcacccccag tgacaatgct 4921 gcccagtggc cgcatcaagt gcataccctg cggcaaggag ttcaccaaaa tctgctacct 4981 cacgcagcac aacaaaagtt tccattccgg tgagtatcca tttcgatgtc aaaaatgcgg 5041 taaacgctat caatccgaag atgtctatat cacccatttg ggcaagcaca agaccaccga 5101 caaggcgcac aagtgcgata tgtgtcccaa gcaattccat cacaagacgg atttgcggcg 5161 ccacattgag gccatacaca cgggcaacaa acaacattcc tgcgatatat gcgagaagag 5221 tttctgtcgc aaagatcatt tgcgcaagca tctcgagaca cacagtagac cgcgtatggt 5281 tagcaaaaag tcacgcaacg ccaccaactc agcggcaaca acgacaacca cgagtggtgg 5341 tgcggcgacc gcgacaacga cgacgggtgg tattcgtagc atagccaagg cttttgccaa 5401 aatcgaaaag aaatccaaag attctccatt gttgttaaat gccccaacag catcttgtgc 5461 atctccacca ccggctatgc agtcatcttt ggccgccggc aatgctgcta tgcacgccgg 5521 cggcaaaaga cagcagcaac agcaacaagc taagcatttg ctcaatatca aatgtgagaa 5581 ttcttgctca ccctcagcat cgccagtctc tatgcagaat caccacctgg cggatgatgt 5641 tgctgttgac gatgatgaat tattagacga agatgactat gatcttgatg aagaagaata 5701 cataagcatt gaacagtatg aacaagaaat tcatcagcgt caacaacaac aacagagaga 5761 actgcaacag caagagcaac aacagcaaag tttgcaacag cagctgatgg agaatggagg 5821 ccaatttgct ttgggaaaac agcaacaaca ccaacaacag cagcaggcat atcagattat 5881 agagcaggaa ataccttcgt attgatgatc agtggctatt aaaaggcttt ctagagagat 5941 gacaacagag aaatgaagat agagtttata agagagtggg taagaacatt gaagagagcg 6001 agagagagtc aaaatgcgtt aaaagtttgt gaaatgagaa