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LOCUS XM_013248336 4402 bp mRNA linear INV 02-SEP-2023 (LOC106084567), mRNA. ACCESSION XM_013248336 VERSION XM_013248336.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248336.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..4402 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4402 /gene="LOC106084567" /note="uncharacterized LOC106084567; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins" /db_xref="GeneID:106084567" CDS 620..4264 /gene="LOC106084567" /codon_start=1 /product="uncharacterized protein LOC106084567" /protein_id="XP_013103790.1" /db_xref="GeneID:106084567" /translation="MGSDQQSNKKCGEILINIKKNNKTKSYTFKCEFCNTSCGQLKKF SLHLEEKHSVEILDEPMPFLKEAKVEEGNLSFSPETEVKIELMEEIEHDTIEKIDESK TYTVEYLDPLAAEAESIALKYQHESEEYEESVDDSTSSESENDYEGNKDKVTIKEGHA TTNSEDTETPTSTNKLQCNVNETELTVCILKALEKQPALWDVKSRSHNKIIRQARFQD IANEINENLKIQIKWEFVRNHVKDLRTSYSYEYDKQKKGENYEMPWYSEHMGFLKENI EALIKHRFKKKKYKRLKTLDDAHIPIFIECYKNCEILWQVNNINFVLKTKKTETLKQM IQELKTKHNVDINLQDMQRSLDYINRLYSEDRGKQLQCEIEKKEFKPNSKYYHQLSFL SESQGPFLCCHCQEIITKFEKYHIHVSEHTKVVPFKCALCEVRFKKLSKYIVHAKRHL GLHKYHCDICGKGYQFRSELEWHVRQHTGEEPYLCEICGASFRSQNSYDNHIRRHEKR FRYECHICKHGFNHPHKLKSHVKAHLNIRDILCNVCGKGFTAMNHLRRHQQIHSGIKR YKCDVCEKAFAQDAGLRAHRKQHDAVEGPKNGGRKRRYNYDKPFHGYLWIFQTILYIK MNKYKDYIKCGEIYKSPSINPKEEEYVFKCLCYNEEHYINLEKFILPLCSNIINNDKL LYRDTSHCILAASDSQNEKPSEDVEIKYEDIAKVDVDPLNILKIGSLEDSKQLTEIKE EFPLEEPECLIDTKAEESLNEGHLSNDSENEEYGNELDSDNDSLASDDSNSPLFVHNF IKSKRNVMALIEAYKNQPQLWNQKYPQFALKKKHDKYLEEIREELKKQMNLSLTCSLI SAVITYLCRKYRQDLKRLRLTELHEERPDDKNPPSWFFMHLEFLKPIVEKTLVKTLNS SRRPNLEQEQIIQMLDIYRRLPYLWNTNLIENVCKNKRLEALAQMRNMVETEMQLKLS ENLLKNNILFFHNHFTKLKRLLIIEGKTPKNDIYYKSMEFLHDHVGPFKCHECSQVFK SPLAFKVHRSQHDGLAAIRCSLCNKAYNTSGPYISHARRHCEDLNEECKQCGKKFLMV SDLKIHMRSHTGAQPYCCEICGVSFRHSTSLNVHRRRHEKQYLHKCPICSKGFYKKDR MNDHIRSHNNIRDFACKICGKAFKTRKTLKQHEVIHNDSRNHVCSLCGKAFKLKVGLL QHMRTHGGHL" misc_feature 1199..1435 /gene="LOC106084567" /note="Alcohol dehydrogenase transcription factor Myb/SANT-like; Region: MADF_DNA_bdg; pfam10545" /db_xref="CDD:463144" misc_feature 1904..1966 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1988..2050 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2024..2101 /gene="LOC106084567" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 2072..2134 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2156..2218 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(2171..2173,2177..2179,2183..2185,2189..2194, 2201..2206,2213..2215,2255..2257,2261..2263,2273..2278, 2285..2290,2297..2299,2339..2341,2345..2347,2351..2353, 2357..2362,2369..2374,2381..2383) /gene="LOC106084567" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 2240..2302 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2276..2353 /gene="LOC106084567" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 2324..2386 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 3041..3319 /gene="LOC106084567" /note="Alcohol dehydrogenase transcription factor Myb/SANT-like; Region: MADF_DNA_bdg; pfam10545" /db_xref="CDD:463144" misc_feature 3398..3667 /gene="LOC106084567" /note="myb-like, SANT family; Region: GT1; cl23759" /db_xref="CDD:474047" misc_feature 3683..3745 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275370" misc_feature 3767..3829 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 3851..3913 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature <3926..4090 /gene="LOC106084567" /note="hypothetical protein; Region: PHA00733" /db_xref="CDD:177301" misc_feature 3935..3991 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 4019..4081 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(4034..4036,4040..4042,4046..4048,4052..4057, 4064..4069,4076..4078,4118..4120,4124..4126,4136..4141, 4148..4153,4160..4162,4202..4204,4208..4210,4214..4216, 4220..4225,4232..4237,4244..4246) /gene="LOC106084567" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 4103..4165 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 4187..4249 /gene="LOC106084567" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 gctacggcat gcatgccagt cagaatatgc cttaccgaac atggtcatat aaaagccttt 61 gttgaaagtt gcagtaccaa tgaagatagc agtgggtcaa gattagcatc accttctgtg 121 ctgtatagat ctatctacct catctatata tgacgttact agtgaggcat aactaaaacg 181 tatgagggca gcagtcaact ctaaccggtc tcggcacgca ataactatga gcaccccaca 241 ggatggaact ttgaactccg ttctccgatg aacagagaaa ctcagtgaag gctaccagac 301 tcgaccacag gttacggata ttggaatgct ccataggcat acagagaagt tgcaattgca 361 gtagcggaca atcagcggta tcgagtggag agaagtcagg cgacaccggc tcttgcttaa 421 atattgagta cctgtgaaat tctatatcta tgtatcagat acattttaag ttgtttagcc 481 gttgtgaatt taattttata catccggtta acagagttga atttttgcac aaactgctgc 541 tcaaattgtt attatgttac aaccccaact gaacacacac cttcagcaaa tgtaaacaag 601 caagttgaat acagttaaaa tgggctcaga ccaacaaagt aacaaaaaat gtggcgaaat 661 tttgataaat attaaaaaga ataataaaac caagagctat acatttaaat gcgaattttg 721 taatacaagt tgtggccaac taaaaaaatt ttccctgcat ctcgaggaaa aacattctgt 781 agaaatatta gatgaaccaa tgcctttttt gaaagaagcc aaagttgagg aaggcaactt 841 gtccttttcc cccgaaacgg aagtcaagat agaattaatg gaagaaattg aacatgatac 901 tatcgaaaag attgatgaaa gtaaaactta caccgttgaa tatctagatc cattggcggc 961 tgaggcagag tccatagctt tgaaatacca gcatgaaagc gaagaatatg aagaaagtgt 1021 agatgattcc acttcttctg agagcgagaa tgattatgag ggaaataaag acaaggtcac 1081 cattaaggaa ggacatgcaa caaccaactc tgaagacact gaaacaccta catctacaaa 1141 caaattgcaa tgcaatgtca atgaaacaga gttaacagtg tgcatattaa aagctttgga 1201 gaaacaacct gctctatggg atgtcaagag ccgctcacat aataaaatta tacgacaagc 1261 tcgattccaa gatatagcca atgaaattaa tgaaaaccta aaaattcaga taaaatggga 1321 atttgttaga aatcatgtta aggatttacg cacttcctat tcatatgaat atgataaaca 1381 aaagaaggga gaaaattatg agatgccttg gtattcggag catatgggat ttcttaaaga 1441 aaatatagaa gctttaataa aacatcgatt caagaagaaa aagtataaac gtttgaaaac 1501 tttggatgac gctcacatac caatttttat tgaatgctat aaaaattgtg aaattctgtg 1561 gcaggtgaat aacatcaatt ttgttttgaa aaccaagaaa accgagacgc ttaaacaaat 1621 gatacaagag ctaaagacca aacacaatgt agacattaat ctgcaggata tgcaaagaag 1681 tctggactat ataaatcgcc tttactccga agatagaggc aaacaattac agtgtgaaat 1741 tgaaaaaaag gaatttaaac caaattcgaa atactatcac caactctcct ttcttagtga 1801 aagtcagggt ccctttttat gttgccactg ccaagaaatt ataacaaaat ttgaaaaata 1861 tcatattcat gtgtcggaac acacaaaagt tgtgccattc aaatgtgccc tatgtgaagt 1921 gagattcaag aagctttcca aatacattgt gcatgccaaa cgtcatttgg gtttgcataa 1981 atatcactgt gatatttgcg gcaagggcta ccagtttcga tccgaattgg aatggcatgt 2041 cagacagcat acgggagagg agccatattt gtgtgaaatt tgcggtgcca gctttcgttc 2101 ccaaaatagt tatgataatc atatacgcag acatgagaaa cgatttcgtt atgaatgcca 2161 catatgtaaa catggcttta atcatcccca taaattgaaa tcccatgtta aggcacatct 2221 caatatacgt gacattttgt gcaatgtctg tggcaaaggt tttacagcca tgaatcattt 2281 gagacgacat caacaaatac actcgggcat aaagcgttac aaatgcgatg tttgtgaaaa 2341 agcctttgca caggatgccg gtttgcgagc tcatcgaaaa caacatgatg cagtggaagg 2401 tccaaagaat ggtgggagga agcgaagata caattatgat aaacccttcc atggatatct 2461 ttggattttc caaactattt tatatataaa aatgaataaa tacaaggact acattaaatg 2521 tggagagatt tacaagtcac cctccattaa tcccaaggaa gaagaatatg ttttcaagtg 2581 tttgtgttac aacgaagaac attatattaa tcttgaaaag tttatactac cactatgcag 2641 caatattatt aacaatgata agctgctgta cagagataca tcacactgca tccttgcagc 2701 atcagatagc caaaatgaaa aacctagtga agatgttgaa atcaaatatg aagatattgc 2761 gaaagtggat gtggatcctt tgaatatttt aaaaattggc tctttggagg acagcaaaca 2821 attaactgag atcaaggagg aattcccatt ggaagaacct gagtgtttaa ttgataccaa 2881 agcagaggaa tcactaaatg aaggtcattt atctaacgac tcggaaaatg aggaatatgg 2941 caatgaattg gactctgaca atgattctct agcttcggat gatagcaatt ctcctttatt 3001 tgttcataat tttatcaaat ctaaacgtaa tgtgatggct ttgattgagg catataaaaa 3061 tcaaccccaa ttatggaatc aaaaatatcc ccagttcgct ttgaaaaaga aacatgacaa 3121 atacctggaa gagatacgcg aagaattaaa gaaacaaatg aatctatcat tgacatgttc 3181 tttaatatca gcagttataa catatttgtg tcgtaaatat cgacaagatt tgaaaagatt 3241 aagattaacg gaattgcatg aagaaagacc agatgataag aatccacctt cctggttctt 3301 catgcacttg gaattcttaa aaccaattgt tgaaaaaact ttagtcaaga ctttgaattc 3361 ttcgcgaagg cccaacttgg agcaagaaca aattatacaa atgctggaca tctataggag 3421 attaccctat ctttggaata ccaatcttat tgaaaatgtt tgtaaaaata aacgtcttga 3481 ggctttggct caaatgcgca acatggttga aactgaaatg cagctgaaac ttagtgaaaa 3541 tttactcaaa aacaatatac tcttctttca caatcatttc acaaaactga agcgtttatt 3601 gataatagaa ggtaaaactc ccaaaaatga tatctactac aaaagtatgg aatttctaca 3661 cgatcatgtg ggacctttca agtgccatga atgttcccaa gtatttaaaa gtcctttagc 3721 gtttaaagtt catagatccc aacatgatgg attggcagcc ataaggtgct cattgtgcaa 3781 taaggcctac aatacttccg gtccctatat atcacatgcc agaagacatt gtgaagatct 3841 aaacgaggag tgcaaacagt gcggcaaaaa gtttctaatg gtcagcgatt tgaaaataca 3901 catgcgttct cataccggag cccagcccta ttgttgtgaa atttgtggtg tttcctttcg 3961 tcacagtacc tcgctgaatg tgcatcgaag gcgtcatgaa aaacaatatt tacacaaatg 4021 tcccatatgc tccaagggtt tctacaagaa ggatagaatg aatgatcaca taagatccca 4081 taacaatata cgtgactttg cttgcaaaat atgtggcaaa gctttcaaga ctagaaaaac 4141 cctaaaacaa catgaggtca tacacaatga ttcgcggaat catgtttgtt ccttgtgcgg 4201 taaagcattt aaactcaaag ttggcctact acaacatatg cgaacgcatg ggggacattt 4261 atgaagcaat tataatacct tgaagtatta ttgtaaaggt ctaagatttg aaataaaaca 4321 aaattatgtg tgcatatatt attttaaatc atagaatgta tgtacatgca taaaataaat 4381 tgtatacatg ttattttttg gt