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LOCUS XM_013248300 3711 bp mRNA linear INV 02-SEP-2023 (LOC106084546), transcript variant X1, mRNA. ACCESSION XM_013248300 VERSION XM_013248300.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013248300.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3711 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3711 /gene="LOC106084546" /note="retinoblastoma family protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106084546" CDS 228..2837 /gene="LOC106084546" /codon_start=1 /product="retinoblastoma family protein isoform X1" /protein_id="XP_013103754.2" /db_xref="GeneID:106084546" /translation="MTQSREDETEAIRARYEELCRELNMDRETEELSWNKYLEISQSC SLEGDKLHWFCCALYAACRGSYTPTVGGGKNDVVLGNCISVVKLLRNCNMSIYEFTSK MRKWCEMAKLPEQFLNQINKMERSYSITSNVFMRYTDIFEQLFVPPPNEKKNSKFRTA KCPYGKLFKISWYLYLCAKNQNQVTDIVMSFHLLIWCIDLIYRNVLSENPDLINPKFV GVPPKWGQPDFDARILKDYCIIEPLCNMTNASPHDAINMKETFKRNIQDFLDSNTLCG SEDTLVSNANFERNLRSLKGAYELYVLNMGELDERILLDYRKINSSHESSGIKIDLQS DIKSLMPNTPYTRKESLPSKDGILDPVANATNNVKKLREISNITDYTDFIRKSTSEEV MKKMQDQVTVMSKIFYNKFPNKEESVNKFQLAKSLYYYLMDKILQSEVTNRHIDLNII LQKSDSINTTLIACSVEIVLDAYDSPLKFPWILECFSITAFEFYKLIEIIVRSHNGIL NRELIKHLNLIEEMCLDNLAWKKSSPLWELIKKEPMPLPTWSEVKVNNSDCSEPQLQS PMNSAFDTFSAASTPVVNESVRRDLFNTPKESATSQIINKNNDVSRQAIAPKRSKPLK LFLRKFYTLAWLRIKELCRELDLGDEMVLKIWTLFEYSITKRTELMQDRHLDQIFMCA IYLYIKVGEVSDKLFRDIMKFYRKQPQATSSIYREVLIKADEDDITEVGDIIMFYNEI YMQKMTPYAWNFSKKKPENSDNVLLLSPHPTEKQTFPQQLSGNHYFFVHALDKNELDK YTASPNQLIFEICRSPGKDLEKINAIINSNGKRNLPFALMDPADEPDRKRTRGSGNQA LLKMMKDRQQEHQ" polyA_site 3711 /gene="LOC106084546" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttctttcata tcggttgggg ggagactata tttgtgtttt tctgagtcga caaagacaaa 61 aatttgtcat tattggcaag tctactaaga aataaagtta acaacgctag tgctagtggc 121 tttgttcctt tttaaatgtg tagcaacaat acatttggac tgtgaagacc ttgctagtgt 181 atatatttaa ttcaacagac cctatagtaa acgttttgac tatcataatg acccaatctc 241 gcgaagatga aaccgaagct atacgtgcta gatatgagga attgtgccgc gaacttaaca 301 tggacaggga gacggaagag ttgtcatgga acaagtacct agaaatatct cagagttgtt 361 ccctagaggg agacaaatta cattggtttt gttgtgctct atatgctgct tgccgtggtt 421 catatactcc aactgtggga ggtggtaaaa acgatgttgt tttgggcaac tgcatatccg 481 tggttaaatt gctaagaaat tgcaatatga gcatttatga atttacctca aagatgagga 541 aatggtgtga aatggcaaaa ctacccgagc agtttctgaa tcaaatcaat aaaatggaac 601 gtagttacag cataacttcg aatgttttta tgcgttatac cgatatattt gagcaacttt 661 ttgttccacc acccaatgag aagaaaaatt ccaaattcag gactgctaaa tgcccatatg 721 gaaaattatt taaaataagt tggtacctat acctctgtgc caaaaatcag aaccaagtga 781 ctgacattgt aatgtcattc catcttttaa tctggtgtat tgacctaatt tatagaaatg 841 tactaagcga aaatcccgat ctcattaatc caaagtttgt gggcgtgcca cccaagtggg 901 gacaaccaga ttttgatgct cgaattttga aagactattg cattattgag ccactgtgta 961 atatgacgaa tgcttcacca catgatgcca taaatatgaa ggaaacattc aaaaggaaca 1021 tacaggattt cctcgactct aatactctgt gtggcagcga agatactttg gtgtccaatg 1081 ccaattttga acgtaatttg aggtctttga aaggcgccta cgaactctat gtattgaata 1141 tgggcgaatt agatgaacga attttgttgg attatcgcaa gattaatagt tcacatgagt 1201 catctggcat aaaaattgat ttacaatccg atataaagtc attgatgccc aatacaccat 1261 atactaggaa agaaagcctg cccagcaaag atggcatctt agatccggtg gcaaatgcta 1321 caaacaatgt caagaaatta cgtgaaattt ccaatataac cgattacaca gattttataa 1381 ggaaatctac aagtgaagag gttatgaaga aaatgcaaga ccaagtcaca gttatgtcta 1441 agatattcta caacaagttc cccaacaagg aagagtctgt gaacaaattt caactagcaa 1501 aatcattgta ttactattta atggacaaaa ttctacaatc cgaagtaacc aataggcaca 1561 tcgatctcaa tataatacta caaaaaagtg atagcatcaa tactacacta attgcatgca 1621 gtgttgaaat agttcttgat gcctacgatt cacctctgaa gtttccctgg attttggaat 1681 gtttcagtat tactgctttc gaattttaca aacttatcga aattatagtc agaagtcaca 1741 atggcatact aaaccgggaa ttgattaagc atcttaatct aatagaggaa atgtgtttgg 1801 ataatttggc gtggaaaaag tcttcgccac tctgggagtt gattaaaaag gagcctatgc 1861 cgctaccaac atggtcggaa gttaaagtta acaatagcga ttgttctgaa ccgcaattac 1921 aatcaccaat gaactctgcg tttgatacgt tcagtgccgc atctacacct gtagtcaatg 1981 aatctgtaag aagagatctc tttaatacgc ccaaagagag tgctacatcc caaatcatta 2041 acaaaaataa tgatgtcagt agacaagcaa ttgctcctaa gcgctctaaa cccttgaaat 2101 tatttctcag aaagttttat acacttgcct ggctgcgcat aaaagaatta tgcagagaac 2161 tggatcttgg ggatgagatg gtgcttaaaa tatggactct atttgaatat tccataacga 2221 agagaaccga attgatgcaa gacagacatt tagatcaaat ttttatgtgt gcaatatatt 2281 tatatataaa ggttggcgaa gtaagtgata aactttttag agacataatg aagttctata 2341 gaaaacagcc acaggctaca agcagcattt acagggaagt cctaattaag gcagatgaag 2401 atgatataac agaagtggga gacatcataa tgttttacaa cgaaatttat atgcaaaaga 2461 tgacaccata cgcttggaat ttcagcaaaa agaaaccaga gaattcggat aatgttttgc 2521 ttttatcgcc acatccaact gaaaagcaaa catttccaca acaactctcg ggaaatcact 2581 acttttttgt tcatgctttg gacaaaaacg aattggacaa atacacggcc tcgcccaatc 2641 aactaatatt tgaaatttgt cgcagtcctg gcaaggatct agagaagata aatgccatca 2701 ttaacagcaa tggaaaacgt aatctaccct ttgccttaat ggacccagca gatgaaccag 2761 atagaaaacg aacaagaggt tccggaaatc aggctctttt aaaaatgatg aaagatcgtc 2821 aacaagaaca ccaataattg cgctcgagtt tttataaaac caactttttt tatttattca 2881 acgacaaaat gaaatccgta gtttgcacaa gattttatat tcaattatta ttatgtttta 2941 ttcaaaagag agagagagag agatagagaa aaagcaaaat attggtttat aatataaaaa 3001 tgaactttcc tgtatataat tcgctaagag aaccatttat tatcaccaac attttctata 3061 tgaaagtttc cctttagaag tatttgaact cataaatttt aatttttaat tttatcgaaa 3121 taatcattct aaactactat tagaaatttt attaacataa aaactaaaca aacatacata 3181 catacttaca tatgtatatt tgaattaaca acgcgttgtt ttagaatgaa ttccatcaac 3241 tatctatcta tatatatgca ctagtatata taaatctatt taaaatgaaa aaagtcttta 3301 gttatgtaca ttgtattgct aatactaact tttttgttaa caaaatttcg tcgtatagaa 3361 atgacaaata attatctaat aacgtgaaaa accatgtaaa ttattcaata tttaataata 3421 aacaaaaact ttaaattaat acgtaaaata attttataaa tagattgttg tcatccatcg 3481 tcctaattct cgcatcccgc tatctagcga gtttttgttc gaagattaat tccgttagta 3541 caaatttgat catggcttat gatcgtaatt tgtcaaaaag ttatcgattt cggggaagaa 3601 aaatccacac gccgaacata ttttgccatc tcaaaggtaa acaaagcaaa tggtggtagt 3661 ttaaaaaagt tattagtaca aaaaaataaa tgaaacacgt tcttcacaat a