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PREDICTED: Stomoxys calcitrans monocyte to macrophage


LOCUS       XM_013248298            2732 bp    mRNA    linear   INV 02-SEP-2023
            differentiation factor (LOC106084544), transcript variant X3, mRNA.
ACCESSION   XM_013248298
VERSION     XM_013248298.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013248298.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2732
                     /gene="LOC106084544"
                     /note="monocyte to macrophage differentiation factor;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:106084544"
     CDS             1054..1869
                     /gene="LOC106084544"
                     /codon_start=1
                     /product="monocyte to macrophage differentiation factor"
                     /protein_id="XP_013103752.2"
                     /db_xref="GeneID:106084544"
                     /translation="MKNVIQEVQNKYSFLDNLLTNFWKSWTKSNSTFKLQLKNIKWKN
                     KKAEPGCAYKPTEIEKLANVITHGIWIIPAVICANKLFERSKNSSQYLVSWVYGGALT
                     LLFTVSTFFHCSCFCDNQNGIKNVLHRCDRAMIYIFIAASYFPWLQLDNLDHSNVLVC
                     LEWLIWLLAAIGITYQQIFHERFKCLETCFYILMGLGPALAVYGTGHEFPGMTELKLG
                     GFFYIVGICFFKSDGLIPMAHAIWHLFVVIAAGFHYYAILVNLYPPEETNSNV"
     polyA_site      2732
                     /gene="LOC106084544"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttgtgtacat ttccctttaa tagaaaacgt gtgtaagctg gccatctgta tctttatatt
       61 aaaattatgt agggtgatga gtaattaatc attgaatata gtgtgttgaa tgtgcaaaat
      121 ttagcaagtt tctttgcatc atgttatggc caaataaaaa aaagatctga acactttggg
      181 gacttaagaa tcaatttggg aggcaaattc tacaacaaaa ttaatagcac aagtgctttg
      241 tatagtgtaa tttttgtctg ctaccgaaga ccgacccttg gcagccggtt gtacgtaccg
      301 gattgacccg atggaatccc ttatctgtaa gagctgccgc ctcgctgtac aacacactgc
      361 tacaataaca acaaccggct cacaatatcg gttttggcag tttgagcggc cagcatgtgt
      421 tcatttgttt atagcgcgcc atggccatgg ccagcagtat attaaagaga tcacacctta
      481 aaactgttgt tcactttgaa atctcgtttg ttatggaacg attcagagag gttcatgctt
      541 tttcgaacta agaaacgtgt atcagcatgc atcatcttgc aaagccatca atttataggg
      601 acaccaaact cacttttggt caagtcaacg tagcgcagtg gttaccatgt ccgcctttgc
      661 cttggttcga gtcctggcaa gaacaccaga aaaatttttc agcgggggtt ttccctccta
      721 atgctggcga cgtttgtgag gtactatgcc ttgtaaaaaa acttctccac aaatagatgt
      781 cgcactgcgg cacgcccgtt cagactcggc tataaaaagg aagcccctta tcgttgagct
      841 aaaacttgaa tcggacagca ctaaaatggg agaagtttgc ctctgttcct taatggaatg
      901 ctcaaatttg ctattttgaa aactgagatt atgcttgaaa tatctttgaa cgcatagagc
      961 tgttgagagc gaccttgcag tcggggaaaa gatgtttaac acatttagta gactggtggt
     1021 tacgaaagcg agggacaaat ttcactggcc gctatgaaaa acgtcataca agaagttcaa
     1081 aataaatact catttttaga taaccttcta acgaacttct ggaaatcatg gacaaagtcg
     1141 aattccacat ttaagctaca attaaagaat atcaaatgga aaaataaaaa ggcagagcct
     1201 ggttgtgcat acaaaccaac agagatagag aagctggcaa atgttataac ccatggtatt
     1261 tggattattc ccgcagtgat atgtgccaat aaattatttg agcgttccaa aaattccagc
     1321 caatatttgg tttcgtgggt ttatggtgga gccttaacgc tgctttttac agtttcaaca
     1381 tttttccatt gctcatgttt ttgtgataat cagaatggca tcaaaaatgt tctacatcgc
     1441 tgtgatcgtg ctatgatata catattcatt gctgcttcat atttcccgtg gctacaatta
     1501 gataaccttg atcattccaa tgtcttggta tgtttggaat ggttaatttg gttactggca
     1561 gcaattggta tcacatatca acagatattt catgaacgat ttaaatgttt ggaaacttgt
     1621 ttttacatac taatgggatt aggcccggcc ttagctgttt acgggacggg tcatgaattt
     1681 cctggtatga ctgaacttaa attgggtgga tttttctata ttgtaggaat atgtttcttt
     1741 aaatcagacg gtctgatacc aatggctcac gccatatggc atttgtttgt ggtcatagct
     1801 gccggatttc actattatgc cattctagtt aacctatatc cccccgaaga gaccaattcc
     1861 aatgtttaac aaaaacccaa aagtgtgaag gtggtggtga gagttagtta cttaatttat
     1921 tcaattcttt ttagtttttt ttcgcattct tcatattgat ttttgagttt tcacttcaca
     1981 aagcgcgcgc ccctcccatc ccatcgtttc cattagtcaa tttctcaatg atgttcattt
     2041 actcgttact ttgttttctt tggaaccatt gatttcattt tgtaataccg aatttatttt
     2101 gttacaacta ttttagttaa gttttttttt tttttttgat ttttttttgg ttattctatc
     2161 gaatatttta gaaatcattg cattgcatct tcaaattcaa agcttccgag caatttattt
     2221 ctattttaat tataaaatat atacgtttat aagccaatgt acacgtacat aatgaacaat
     2281 gacagcctga aagagacata ttgaagactc catacatttg tattctctcc atactataaa
     2341 aataattttt tttaattgtc gacttggagg agtttgaata gaattatttt gaaaaaaaaa
     2401 aaaaaaaaac ataaacgtct tccttggggg accgatcaaa caaacgtgcg accgaccgac
     2461 gaacaaacct tatgtgtgta acaagatttt ctcccttata ctatttaccg caaggaatgt
     2521 ttacatatgt atggcaccat catgttaacc gccatacatg tatacacgca taccaacaca
     2581 cgtatgcata taaatgtgca cattattttt gtaaaatgta atcgagagag tgtttaccca
     2641 gtgtaaagtg tgattttttc aaatattttt gcctccaaag tataaccacc aattttccaa
     2701 aaccaaatta tatataccta aataaatgaa aa