Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans WD repeat-containing protein


LOCUS       XM_013248294            3224 bp    mRNA    linear   INV 02-SEP-2023
            DDB_G0292056 (LOC106084543), mRNA.
ACCESSION   XM_013248294
VERSION     XM_013248294.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013248294.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3224
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..3224
                     /gene="LOC106084543"
                     /note="WD repeat-containing protein DDB_G0292056; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:106084543"
     CDS             818..2236
                     /gene="LOC106084543"
                     /codon_start=1
                     /product="WD repeat-containing protein DDB_G0292056"
                     /protein_id="XP_013103748.1"
                     /db_xref="GeneID:106084543"
                     /translation="MLSYVIPAQETSASNGGRGATSHQGDVGEAQAGPLLSSPRNSLS
                     LRLNSQYMAGADSHTEVDALLANVNVASAGGHEYYDDERTHLLNDTNHTSSTPVVKRQ
                     NSNGSNSNNNNSFSLNNNRRNSNGSSGAGGGALAEATATSAEGCGDDVVNVNVCGIAE
                     ETFSTDAIASHQHQHSAATDVSNKLPAQPEESQNPRQQTIAANTKKPKLSKLGSNKTV
                     GLKRVSFGSSKGSMVETLVFETPTPLSEHVEPSFGFGSDGDYKSNMDDSGIEVQEESE
                     RSIVRVSIYQSSKPQQICPPEYFTKFEDNLDNSLSNYNCNLDDIMTTASPIPGYDRQQ
                     STDSGWDNPFRPGGDLSREADEIVKMISGGKPITPTEDNAIANGKSQSNGTSNGTVVT
                     EDITKSNVSQNQSAQNGTHRVQPTAAAAGGGGGAAAKPTENNGVTSLAQVSKQVVPGP
                     TSASHVVIDEKKNKKKGCCVIQ"
     polyA_site      3224
                     /gene="LOC106084543"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttttaataca actacaaccg ccgcgccgcc gacgtaaaca aattgcccct ttaaaaaaaa
       61 aaattaaaaa ataattgtgc atgttttttg tatgttcttg tgatataaat ttttattgtg
      121 gtgttataca agcccagcca atttatccaa tcaatcatat tcgtataaaa gaaaaaatta
      181 ccccaagtga cgtcgaaacg aatttgccaa atgcgcctga actgaatttt atgatacaaa
      241 caaaacacag ctaaaaccaa caatagaaaa taggaaaaac gaaacgctta aacaacgctg
      301 gctgctactg gtgtaaatgg tgtatggaat aatagtggtg gaatgcatgc gaaaaaggaa
      361 aaaagccaaa acgaacgaaa aagtcgtaaa aattaaaagg tgcattgtaa acattcattc
      421 gggaatttag tgaataaaat cccccaaaag gtgtggagta tcgtggacag gcaagaaaga
      481 acgtaaacat aagactgact gacagcagca ctcttttttt tttgtgtgct gggactgaaa
      541 cgaatttgaa ctgagttaga aattaaaaaa aaaaataatt gaagaattgt cgtcaatacg
      601 gaagtggccc ctaaaaaaag actgcatgga actgtgagta gcaaaccaga gcgaaaggaa
      661 aggatccaaa gaaacgaaac aaaaccaaaa caaagacaac tgcgacacct gcaatcatac
      721 gagtgacgag aaggagtgca gaaaagtgca aacactacac aaaacctcga catcgaagaa
      781 tcaacatcat cgctgctgag gaggaagagc accattaatg ctatcctacg taatacctgc
      841 ccaggaaaca tcggcttcaa atggtggccg tggtgcaacg tcgcatcaag gagacgttgg
      901 tgaggcacag gcaggaccat tgctttcgtc accacgcaat agcctaagtc ttagattaaa
      961 ctcgcaatac atggctggag cagattccca taccgaggtg gatgccctgc tggcaaatgt
     1021 gaatgtggca tctgctggtg gccatgagta ctatgacgat gaacgcaccc atttgctgaa
     1081 cgacacaaac cacacatcat cgactccggt ggttaagcgt cagaatagta atggcagcaa
     1141 tagcaacaac aacaactctt tcagcctgaa caacaataga agaaacagta atggcagtag
     1201 cggtgctggt ggtggtgctt tagcggaagc cactgccact tcggcagagg gctgtggcga
     1261 tgacgttgtc aatgttaatg tttgtggcat agctgaggaa acattttcca ctgacgctat
     1321 cgcatcccac caacatcaac atagtgcggc aaccgatgtc agcaataagt tgccagcaca
     1381 gcccgaagaa tcccagaatc cccgccaaca aacgatcgca gctaacacaa agaagcccaa
     1441 actcagcaaa ttgggttcaa acaaaacggt cggactgaaa agggtatcat ttggttcctc
     1501 caaaggctcc atggtagaaa cattggtgtt tgaaacgcca acaccattgt ctgaacatgt
     1561 ggagccaagt tttggatttg gttcagatgg agactacaaa tcaaatatgg atgacagcgg
     1621 catagaggtt caagaagagt cagaacgttc tatagtgcga gtatcaatat atcaaagtag
     1681 taaaccgcaa caaatttgcc ctcccgagta ttttacgaaa ttcgaagata acttagataa
     1741 ttctttaagt aattataatt gtaatttaga cgacataatg acgacagcat caccaattcc
     1801 cggttatgac agacagcaaa gtactgactc tggctgggat aatccctttc gccctggtgg
     1861 cgatttatct agagaggctg atgaaattgt taaaatgata agtggaggta agcccataac
     1921 acccacagaa gataatgcga tagccaatgg aaagtcacag agtaatggta ctagcaatgg
     1981 tacggtagta actgaagata taacaaaatc caatgtatcg caaaatcagt ccgcacaaaa
     2041 tggtactcat agggtgcagc caaccgcagc agcagccggt ggcggaggag gagctgccgc
     2101 taaaccaaca gaaaacaatg gtgttacatc tctagctcaa gtctcaaagc aagtggtacc
     2161 tggacctacg tcggctagtc atgttgttat agacgaaaag aaaaataaga aaaagggctg
     2221 ttgtgttatc caatgaacga atgcagcggt tccgaacatg tttacaatgc tgttgatagt
     2281 ggttagaagg agaatgggga aaatagagcg agcaactgat gatgaagata atgataatga
     2341 tgacgatgat gatgatatgc atgatgaatg tgccgtcgcc gccgccgccg ccaacgacgg
     2401 tgtgcaccac ttagcatgcc tatttgttta tgtatagaaa aacaaaaaaa ctatatatat
     2461 atatatatat atatattata tattattcct aatatatttt ttactaagca tatttattat
     2521 ttatatatta tacatgtttt gcgacaacgg caacagcaaa ggcaaacaac cggcaatggc
     2581 aactatgtaa ccatgatgta gtagtaaaga aacaacaaca acaacaacaa caaaagaaaa
     2641 gaaagcaaaa acacaaaaca caaacaacag caacatcaac caccacaaca aacaaccact
     2701 atcccaaaat caaaatcaat taacgaaaaa aaaattactg acaaagagaa acaaagtgat
     2761 tgatagaaaa ggaaactata atcaccaaga tctaaggatc ttttcagttt gtccttcgtt
     2821 ttgtagggtt tttctggtca gtctttcctt tttttaaact tcctgtttcc cttttatata
     2881 tgctccctac actactgttg ttttattttt ttgtttctta tttttattag aaatagtcta
     2941 tgaaagggaa gctatctttg tgtacacatc cattatactg tgttagtact tttttattat
     3001 tattattatt ttaaatatac tcgtatttat ttttattttt atattaattt ttttttattt
     3061 attttctttt taatcttgtt cttctttcgt tatttttcgt cttttgtttt gtttgtctcg
     3121 tttttgtttg ttaatgtgtc cctcatgtcc ctgagaagaa aaattataac gcatttaata
     3181 aaccaagagc aaaacaattt ctgcacagat gccaccacca ccac